Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014706 Carpinus fangiana HOM05D017147 ORTHO05D011251 5.6e-43 177.2 87 100.0
Haze_13332 Corylus avellana HOM05D017147 ORTHO05D011251 2.9e-31 138.3 87 80.5
Haze_13334 Corylus avellana HOM05D017147 ORTHO05D011251 2.9e-31 138.3 87 80.5
CiPaw.03G185300 Carya illinoinensis HOM05D017147 ORTHO05D011251 1.1e-14 83.2 75 58.7
Potri.013G119100 Populus trichocarpa HOM05D017147 ORTHO05D011251 1.2e-13 79.7 81 54.3
Prupe.3G124600 Prunus persica HOM05D017147 ORTHO05D011251 3.0e-12 75.1 82 53.7
Potri.019G091100 Populus trichocarpa HOM05D017147 ORTHO05D011251 1.1e-11 73.2 81 51.9
Sabra13G0100500 Salix brachista HOM05D017147 ORTHO05D011251 8.1e-10 67.0 66 53.0
TAR629G1463 Trochodendron aralioides HOM05D010626 ORTHO05D012901 6.9e-09 63.9 82 54.9
AL1G16210 Arabidopsis lyrata HOM05D009623 ORTHO05D011251 1.2e-08 63.2 84 46.4
TAR629G3489 Trochodendron aralioides HOM05D010626 ORTHO05D012901 4.4e-08 61.2 82 53.7
Thhalv10017782m.g Eutrema salsugineum HOM05D009623 ORTHO05D011251 5.8e-08 60.8 83 44.6
Sp4g13550 Schrenkiella parvula HOM05D009623 ORTHO05D011251 9.9e-08 60.1 83 43.4
AT2G31081 Arabidopsis thaliana HOM05D009623 ORTHO05D011251 2.2e-07 58.9 83 47.0
AT1G06225 Arabidopsis thaliana HOM05D009623 ORTHO05D011251 2.9e-07 58.5 84 44.0
Aa31LG5G5840 Aethionema arabicum HOM05D009623 ORTHO05D011251 6.4e-07 57.4 85 45.9
AL4G26240 Arabidopsis lyrata HOM05D009623 ORTHO05D011251 8.4e-07 57.0 83 43.4
CARHR005760 Cardamine hirsuta HOM05D009623 ORTHO05D011251 1.1e-06 56.6 83 43.4
BcaB06g28408 Brassica carinata HOM05D009623 ORTHO05D011251 1.9e-06 55.8 80 42.5
A04p23810 Brassica napus HOM05D009623 ORTHO05D011251 3.2e-06 55.1 80 42.5
CARHR124630 Cardamine hirsuta HOM05D009623 ORTHO05D011251 3.2e-06 55.1 82 40.2
Ciclev10017647m.g Citrus clementina HOM05D009623 ORTHO05D011251 4.2e-06 54.7 84 42.9
FAN09G2405 Fragaria x ananassa HOM05D057109 ORTHO05D046591 4.2e-06 54.7 81 49.4
BraA04t17906Z Brassica rapa HOM05D009623 ORTHO05D011251 7.1e-06 53.9 80 41.2
BcaB06g28482 Brassica carinata HOM05D009623 ORTHO05D011251 9.3e-06 53.5 80 42.5
C04p60300 Brassica napus HOM05D009623 ORTHO05D011251 9.3e-06 53.5 80 42.5
BolC4t27531H Brassica oleracea HOM05D009623 ORTHO05D011251 9.3e-06 53.5 80 42.5


User provided reference genes

Program Settings