Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014657 Carpinus fangiana HOM05D008876 ORTHO05D010747 7.5e-75 284.3 202 100.0
QL08p040130 Quercus lobata HOM05D008876 ORTHO05D010747 3.3e-38 162.5 265 54.7
CiPaw.03G181200 Carya illinoinensis HOM05D008876 ORTHO05D010747 1.1e-22 110.9 178 63.5
Lalb_Chr22g0356741 Lupinus albus HOM05D008876 ORTHO05D010747 1.9e-22 110.2 246 43.9
Glyma.13G294400 Glycine max HOM05D008876 ORTHO05D010747 2.8e-21 106.3 189 52.4
Thecc.02G185800 Theobroma cacao HOM05D008876 ORTHO05D010747 2.8e-21 106.3 248 49.2
Duzib132G0209 Durio zibethinus HOM05D008876 ORTHO05D010747 3.4e-19 99.4 243 44.4
Duzib132G0342 Durio zibethinus HOM05D008876 ORTHO05D010747 3.4e-19 99.4 243 44.4
Medtr2g090660 Medicago truncatula HOM05D008876 ORTHO05D010747 3.4e-19 99.4 174 42.0
Gohir.D02G177500 Gossypium hirsutum HOM05D008876 ORTHO05D010747 4.2e-17 92.4 260 43.5
Glyma.12G206500 Glycine max HOM05D008876 ORTHO05D010747 1.2e-16 90.9 188 54.8
Gorai.005G199300 Gossypium raimondii HOM05D008876 ORTHO05D010747 3.5e-16 89.4 264 42.8
Gohir.A03G154600 Gossypium hirsutum HOM05D008876 ORTHO05D010747 1.3e-15 87.4 268 41.0
Phvul.005G100800 Phaseolus vulgaris HOM05D008876 ORTHO05D010747 3.9e-15 85.9 225 38.7
Ca_01482_v3 Cicer arietinum L. HOM05D008876 ORTHO05D010747 6.7e-15 85.1 175 46.9
Ciclev10016096m.g Citrus clementina HOM05D008876 ORTHO05D010747 9.6e-14 81.3 209 45.0
TPR.G6423 Trifolium pratense HOM05D008876 ORTHO05D010747 1.6e-13 80.5 191 51.3
Lj3g0013370 Lotus japonicus HOM05D008876 ORTHO05D010747 2.8e-13 79.7 273 38.1
FvH4_6g26650 Fragaria vesca HOM05D020475 ORTHO05D010747 1.4e-12 77.4 174 36.8
Psat5g273640 Pisum sativum HOM05D008876 ORTHO05D010747 1.4e-12 77.4 186 50.5
COL.COLO4_35512 Corchorus olitorius HOM05D008876 ORTHO05D010747 1.8e-12 77.0 267 37.5
FAN14G3778 Fragaria x ananassa HOM05D020475 ORTHO05D010747 2.0e-11 73.6 175 37.7
Dinv06861 Davidia involucrata HOM05D008876 ORTHO05D010747 2.6e-11 73.2 181 47.5
Dinv01518 Davidia involucrata HOM05D008876 ORTHO05D010747 4.5e-11 72.4 174 36.8
Manes.12G089700 Manihot esculenta HOM05D008876 ORTHO05D010747 1.0e-10 71.2 193 38.3
FAN02G4612 Fragaria x ananassa HOM05D020475 ORTHO05D022619 1.3e-10 70.9 182 37.9
MD09G1241900 Malus domestica HOM05D020475 ORTHO05D010747 2.2e-10 70.1 203 43.8
Potri.007G137001 Populus trichocarpa HOM05D008876 ORTHO05D010747 2.9e-10 69.7 77 53.2
Hma1.2p1_0002F.1_g002230 Hydrangea macrophylla HOM05D008876 ORTHO05D010747 8.4e-10 68.2 76 50.0
Eucgr.A01856 Eucalyptus grandis HOM05D008876 ORTHO05D010747 1.2e-08 64.3 242 43.0
FAN09G4445 Fragaria x ananassa HOM05D020475 ORTHO05D022619 1.2e-08 64.3 174 42.5
Prupe.3G134900 Prunus persica HOM05D020475 ORTHO05D010747 4.6e-08 62.4 191 47.6
Lj1P691T50 Lonicera japonica HOM05D008876 ORTHO05D010747 6.1e-08 62.0 73 52.1
Actinidia11106 Actinidia chinensis HOM05D008876 ORTHO05D010747 1.0e-07 61.2 63 54.0
Actinidia11002 Actinidia chinensis HOM05D008876 ORTHO05D010747 1.8e-07 60.5 75 50.7
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 1.8e-07 60.5 181 28.7
PGR042G1564 Punica granatum HOM05D008876 ORTHO05D010747 2.3e-07 60.1 211 36.5
VMungo1080G0723 Vigna mungo HOM05D008876 ORTHO05D010747 2.3e-07 60.1 68 54.4
Sabra17G0012100 Salix brachista HOM05D008876 ORTHO05D010747 3.9e-07 59.3 97 43.3
Oeu036079.1 Olea europaea HOM05D008876 ORTHO05D010747 1.9e-06 57.0 59 50.8
Cpa.g.sc83.91 Carica papaya HOM05D008876 ORTHO05D010747 7.4e-06 55.1 77 46.8
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 7.4e-06 55.1 181 34.3
Sabra11G0039600 Salix brachista HOM05D007160 ORTHO05D005331 9.7e-06 54.7 195 35.4


User provided reference genes

Program Settings