Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014612 Carpinus fangiana HOM05D005953 ORTHO05D004056 1.8e-23 112.1 73 100.0
CiPaw.04G125700 Carya illinoinensis HOM05D005953 ORTHO05D004056 8.3e-16 86.7 74 83.8
CiPaw.03G176600 Carya illinoinensis HOM05D005953 ORTHO05D004056 5.4e-15 84.0 73 84.9
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 7.3e-12 73.6 76 59.2
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 7.3e-12 73.6 76 59.2
MD17G1240800 Malus domestica HOM05D005953 ORTHO05D004056 4.0e-10 67.8 77 70.1
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 1.2e-09 66.2 78 52.6
Gohir.A04G103800 Gossypium hirsutum HOM05D005953 ORTHO05D004056 2.0e-09 65.5 73 49.3
Manes.12G089522 Manihot esculenta HOM05D005953 ORTHO05D004056 2.0e-09 65.5 76 63.2
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 3.4e-09 64.7 73 49.3
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 3.4e-09 64.7 73 49.3
Manes.13G147000 Manihot esculenta HOM05D005953 ORTHO05D004056 3.4e-09 64.7 77 71.4
Oeu045817.1 Olea europaea HOM05D005953 ORTHO05D004056 3.4e-09 64.7 79 58.2
Prupe.3G137400 Prunus persica HOM05D005953 ORTHO05D004056 7.5e-09 63.5 83 66.3
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 1.3e-08 62.8 73 49.3
Potri.019G100601 Populus trichocarpa HOM05D005953 ORTHO05D004056 1.3e-08 62.8 73 52.1
GSVIVG01020541001 Vitis vinifera HOM05D005953 ORTHO05D004056 2.2e-08 62.0 79 50.6
MD09G1247900 Malus domestica HOM05D005953 ORTHO05D004056 2.9e-08 61.6 81 59.3
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 2.9e-08 61.6 75 50.7
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 6.4e-08 60.5 76 51.3
Psat0s741g0120 Pisum sativum HOM05D005953 ORTHO05D004056 8.3e-08 60.1 73 60.3
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 1.1e-07 59.7 78 47.4
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 1.9e-07 58.9 75 50.7
Potri.019G111501 Populus trichocarpa HOM05D005953 ORTHO05D004056 3.2e-07 58.2 73 60.3
ECA246G2973 Erigeron canadensis HOM05D005953 ORTHO05D004056 5.4e-07 57.4 80 45.0
ClCG02G017620 Citrullus lanatus HOM05D005953 ORTHO05D004056 7.0e-07 57.0 74 59.5
Lsat_1_v5_gn_3_37261 Lactuca sativa HOM05D005953 ORTHO05D004056 7.0e-07 57.0 76 60.5
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 7.0e-07 57.0 76 50.0
DCAR_013006 Daucus carota HOM05D005953 ORTHO05D004056 9.2e-07 56.6 87 42.5
Lsat_1_v5_gn_8_134201 Lactuca sativa HOM05D005953 ORTHO05D004056 1.2e-06 56.2 78 46.2
TAR626G0584 Trochodendron aralioides HOM05D005953 ORTHO05D004056 1.2e-06 56.2 78 44.9
MELO3C018738.2 Cucumis melo HOM05D005953 ORTHO05D004056 1.6e-06 55.8 81 44.4
Potri.013G131900 Populus trichocarpa HOM05D005953 ORTHO05D004056 1.6e-06 55.8 73 58.9
CsaV3_7G004410 Cucumis sativus L. HOM05D005953 ORTHO05D004056 2.0e-06 55.5 80 41.2
Eucgr.A01816 Eucalyptus grandis HOM05D005953 ORTHO05D004056 2.0e-06 55.5 79 58.2
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 2.0e-06 55.5 76 44.7
Lj3g0009023 Lotus japonicus HOM05D005953 ORTHO05D004056 2.0e-06 55.5 76 46.1
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 2.0e-06 55.5 76 46.1
arahy.Tifrunner.gnm1.ann1.XD6XV6 Arachis hypogaea HOM05D005953 ORTHO05D004056 2.7e-06 55.1 73 45.2
CARHR236000 Cardamine hirsuta HOM05D005953 ORTHO05D004056 2.7e-06 55.1 36 72.2
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 2.7e-06 55.1 79 44.3
Sed0013976 Sechium edule HOM05D005953 ORTHO05D004056 2.7e-06 55.1 74 45.9
Actinidia09855 Actinidia chinensis HOM05D005953 ORTHO05D004056 3.5e-06 54.7 73 46.6
Oeu002560.3 Olea europaea HOM05D005953 ORTHO05D004056 3.5e-06 54.7 80 58.8
ClCG07G002930 Citrullus lanatus HOM05D005953 ORTHO05D004056 4.6e-06 54.3 80 41.2
Dinv23644 Davidia involucrata HOM05D005953 ORTHO05D004056 4.6e-06 54.3 80 66.2
arahy.Tifrunner.gnm1.ann1.GJ3E3V Arachis hypogaea HOM05D005953 ORTHO05D004056 6.0e-06 53.9 73 63.0
arahy.Tifrunner.gnm1.ann1.RLZ54R Arachis hypogaea HOM05D005953 ORTHO05D004056 6.0e-06 53.9 73 45.2
Gohir.A03G156801 Gossypium hirsutum HOM05D025024 ORTHO05D004056 6.0e-06 53.9 73 43.8
Phvul.004G108400 Phaseolus vulgaris HOM05D025024 ORTHO05D004056 6.0e-06 53.9 41 63.4
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 6.0e-06 53.9 45 60.0
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 6.0e-06 53.9 79 44.3
Sed0010329 Sechium edule HOM05D005953 ORTHO05D004056 7.8e-06 53.5 79 64.6
TAR627G0894 Trochodendron aralioides HOM05D005953 ORTHO05D004056 7.8e-06 53.5 44 59.1


User provided reference genes

Program Settings