Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014528 Carpinus fangiana HOM05D004655 ORTHO05D005567 6.6e-171 604.0 314 100.0
Haze_13070 Corylus avellana HOM05D004655 ORTHO05D005567 9.6e-154 547.0 375 80.3
QL08p036998 Quercus lobata HOM05D004655 ORTHO05D005567 1.4e-128 463.4 295 83.7
CiPaw.04G122300 Carya illinoinensis HOM05D004655 ORTHO05D005567 5.0e-126 454.9 295 82.7
CiPaw.03G168300 Carya illinoinensis HOM05D004655 ORTHO05D005567 1.2e-124 450.3 295 82.4
MD09G1097200 Malus domestica HOM05D004655 ORTHO05D005567 2.6e-122 442.6 298 78.2
Duzib132G0437 Durio zibethinus HOM05D004655 ORTHO05D005567 9.7e-122 440.7 296 80.1
Duzib132G0466 Durio zibethinus HOM05D004655 ORTHO05D005567 9.7e-122 440.7 296 80.1
MELO3C018772.2 Cucumis melo HOM05D004655 ORTHO05D005567 1.3e-121 440.3 298 78.2
Ciclev10016098m.g Citrus clementina HOM05D004655 ORTHO05D005567 2.0e-119 433.0 297 77.8
Glyma.12G200200 Glycine max HOM05D004655 ORTHO05D005567 2.6e-119 432.6 295 77.6
Lj3g0013026 Lotus japonicus HOM05D004655 ORTHO05D005567 2.6e-119 432.6 294 79.3
Manes.13G152400 Manihot esculenta HOM05D004655 ORTHO05D005567 3.5e-119 432.2 295 78.0
ClCG00G002920 Citrullus lanatus HOM05D004655 ORTHO05D005567 1.0e-118 430.6 298 77.2
ClCG02G001360 Citrullus lanatus HOM05D004655 ORTHO05D005567 1.0e-118 430.6 298 77.2
RcHm_v2.0_Chr2g0161411 Rosa chinensis HOM05D004655 ORTHO05D005567 1.0e-118 430.6 293 78.5
CSS0017466 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 1.7e-118 429.9 294 78.6
CsaV3_7G004070 Cucumis sativus L. HOM05D004655 ORTHO05D005567 1.7e-118 429.9 302 75.5
MD17G1085500 Malus domestica HOM05D004655 ORTHO05D005567 2.2e-118 429.5 295 76.3
Dinv13829 Davidia involucrata HOM05D004655 ORTHO05D005567 3.8e-118 428.7 294 77.6
FAN14G2207 Fragaria x ananassa HOM05D004655 ORTHO05D005567 5.0e-118 428.3 293 77.5
Thecc.02G170400 Theobroma cacao HOM05D004655 ORTHO05D005567 5.0e-118 428.3 295 79.3
Prupe.3G228700 Prunus persica HOM05D004655 ORTHO05D005567 6.5e-118 427.9 290 79.0
FvH4_6g44420 Fragaria vesca HOM05D004655 ORTHO05D005567 2.5e-117 426.0 293 77.1
FAN02G3511 Fragaria x ananassa HOM05D004655 ORTHO05D005567 4.2e-117 425.2 294 77.6
FAN05G4368 Fragaria x ananassa HOM05D004655 ORTHO05D005567 4.2e-117 425.2 294 77.6
Glyma.13G302100 Glycine max HOM05D004655 ORTHO05D005567 4.2e-117 425.2 295 76.3
TAR629G1482 Trochodendron aralioides HOM05D004655 ORTHO05D005567 1.6e-116 423.3 295 75.6
Gorai.012G132100 Gossypium raimondii HOM05D004655 ORTHO05D005567 2.1e-116 422.9 296 77.4
TWI36G0222 Tripterygium wilfordii HOM05D004655 ORTHO05D005567 2.7e-116 422.5 296 76.4
Actinidia12466 Actinidia chinensis HOM05D004655 ORTHO05D005567 3.6e-116 422.2 295 75.9
Sed0025834 Sechium edule HOM05D004655 ORTHO05D005567 4.7e-116 421.8 299 76.6
Gohir.D04G146200 Gossypium hirsutum HOM05D004655 ORTHO05D005567 6.1e-116 421.4 296 77.0
FAN02G1121 Fragaria x ananassa HOM05D004655 ORTHO05D005567 8.0e-116 421.0 294 76.5
Actinidia18535 Actinidia chinensis HOM05D004655 ORTHO05D005567 1.0e-115 420.6 295 75.6
Psat7g149680 Pisum sativum HOM05D004655 ORTHO05D005567 1.4e-115 420.2 291 77.0
Gohir.A04G106100 Gossypium hirsutum HOM05D004655 ORTHO05D005567 1.8e-115 419.9 296 76.7
Potri.019G117900 Populus trichocarpa HOM05D004655 ORTHO05D005567 3.0e-115 419.1 296 76.4
CANSAT64G1156 Cannabis sativa HOM05D004655 ORTHO05D005567 8.8e-115 417.5 295 74.9
TAR627G0814 Trochodendron aralioides HOM05D004655 ORTHO05D005567 8.8e-115 417.5 302 74.8
VMungo1080G0396 Vigna mungo HOM05D004655 ORTHO05D005567 8.8e-115 417.5 295 76.3
COL.COLO4_13659 Corchorus olitorius HOM05D004655 ORTHO05D005567 1.5e-114 416.8 297 75.8
arahy.Tifrunner.gnm1.ann1.81TW8H Arachis hypogaea HOM05D004655 ORTHO05D005567 3.4e-114 415.6 302 73.8
arahy.Tifrunner.gnm1.ann1.S2JPPU Arachis hypogaea HOM05D004655 ORTHO05D005567 5.7e-114 414.8 302 74.2
Medtr4g045980 Medicago truncatula HOM05D004655 ORTHO05D005567 7.5e-114 414.5 296 75.0
Atru.chr6.3084 Acer truncatum HOM05D004655 ORTHO05D005567 2.2e-113 412.9 298 75.2
Phvul.005G108600 Phaseolus vulgaris HOM05D004655 ORTHO05D005567 2.8e-113 412.5 295 75.6
Lj3g0017119 Lotus japonicus HOM05D004655 ORTHO05D005567 3.7e-113 412.1 295 74.2
CSS0020863 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 4.8e-113 411.8 296 74.7
Lalb_Chr22g0356311 Lupinus albus HOM05D004655 ORTHO05D005567 6.3e-113 411.4 288 76.0
arahy.Tifrunner.gnm1.ann1.YR7HYJ Arachis hypogaea HOM05D004655 ORTHO05D005567 8.3e-113 411.0 298 75.2
CSS0004933 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 1.1e-112 410.6 296 74.3
TWI75G0473 Tripterygium wilfordii HOM05D004655 ORTHO05D005567 3.1e-112 409.1 296 74.3
arahy.Tifrunner.gnm1.ann1.XZ54ZU Arachis hypogaea HOM05D004655 ORTHO05D005567 5.4e-112 408.3 298 74.5
PGR042G1100 Punica granatum HOM05D004655 ORTHO05D005567 2.0e-111 406.4 296 75.0
Glyma.06G299100 Glycine max HOM05D004655 ORTHO05D005567 2.7e-111 406.0 287 75.6
Potri.013G148400 Populus trichocarpa HOM05D004655 ORTHO05D005567 2.7e-111 406.0 296 74.3
VMungo1127G2245 Vigna mungo HOM05D004655 ORTHO05D005567 4.5e-111 405.2 290 75.9
Nn1g03859 Nelumbo nucifera HOM05D004655 ORTHO05D005567 1.5e-109 400.2 295 70.8
Lalb_Chr01g0005451 Lupinus albus HOM05D004655 ORTHO05D005567 1.9e-109 399.8 295 72.9
Phvul.011G110700 Phaseolus vulgaris HOM05D004655 ORTHO05D005567 1.9e-109 399.8 290 76.2
TPR.G21652 Trifolium pratense HOM05D004655 ORTHO05D005567 2.5e-109 399.4 277 75.5
Glyma.12G106600 Glycine max HOM05D004655 ORTHO05D005567 5.5e-109 398.3 287 74.9
Ca_01544_v3 Cicer arietinum L. HOM05D004655 ORTHO05D005567 7.2e-109 397.9 294 72.4
EL10Ac9g20731 Beta vulgaris HOM05D004655 ORTHO05D005567 9.4e-109 397.5 290 74.5
Psat5g269080 Pisum sativum HOM05D004655 ORTHO05D005567 1.6e-108 396.7 277 74.4
Ca_20707_v3 Cicer arietinum L. HOM05D004655 ORTHO05D005567 3.6e-108 395.6 312 68.6
TPR.G18073 Trifolium pratense HOM05D004655 ORTHO05D005567 3.6e-108 395.6 297 72.4
MBI18_g27693_MAGBIO Magnolia biondii HOM05D004655 ORTHO05D005567 8.0e-108 394.4 292 72.6
Ah.01g005210 Amaranthus hybridus HOM05D004655 ORTHO05D005567 1.8e-107 393.3 296 73.6
Eucgr.A01774 Eucalyptus grandis HOM05D004655 ORTHO05D005567 2.3e-107 392.9 303 70.3
Nn1g06795 Nelumbo nucifera HOM05D004655 ORTHO05D005567 2.3e-107 392.9 273 76.6
Nn1g06798 Nelumbo nucifera HOM05D004655 ORTHO05D005567 2.3e-107 392.9 273 76.6
Hma1.2p1_0662F.1_g198360 Hydrangea macrophylla HOM05D004655 ORTHO05D005567 6.8e-107 391.3 294 72.8
vmacro12257 Vaccinium macrocarpon HOM05D004655 ORTHO05D005567 1.2e-106 390.6 296 73.0
MSTRG.14176 Avicennia marina HOM05D004655 ORTHO05D005567 2.6e-106 389.4 294 70.7
Migut.H01014 Erythranthe guttata HOM05D004655 ORTHO05D005567 9.8e-106 387.5 294 71.4
Sabra19G0135300 Salix brachista HOM05D004655 ORTHO05D005567 9.8e-106 387.5 344 64.2
Sabra19G0118300 Salix brachista HOM05D004655 ORTHO05D005567 1.7e-105 386.7 344 64.2
AUR62032763 Chenopodium quinoa HOM05D004655 ORTHO05D005567 2.2e-105 386.3 290 73.8
Hma1.2p1_0565F.1_g179650 Hydrangea macrophylla HOM05D004655 ORTHO05D005567 2.2e-105 386.3 296 73.6
Lsat_1_v5_gn_3_40720 Lactuca sativa HOM05D004655 ORTHO05D005567 4.9e-105 385.2 313 68.1
GSVIVG01029990001 Vitis vinifera HOM05D004655 ORTHO05D005567 8.3e-105 384.4 237 81.9
AUR62037119 Chenopodium quinoa HOM05D004655 ORTHO05D005567 1.1e-104 384.0 293 72.0
Medtr2g089795 Medicago truncatula HOM05D004655 ORTHO05D005567 1.8e-104 383.3 288 71.2
PGSC0003DMG400018330 Solanum tuberosum HOM05D004655 ORTHO05D005567 1.8e-104 383.3 296 70.9
HanXRQChr06g0171121 Helianthus annuus HOM05D004655 ORTHO05D005567 2.4e-104 382.9 291 71.8
Sc12g0002690 Simmondsia chinensis HOM05D004655 ORTHO05D005567 2.4e-104 382.9 291 74.6
Sopen07g028730 Solanum pennellii HOM05D004655 ORTHO05D005567 4.1e-104 382.1 296 70.3
Lj1C737G5 Lonicera japonica HOM05D004655 ORTHO05D005567 5.4e-104 381.7 332 65.4
PSO675G0243 Papaver somniferum HOM05D004655 ORTHO05D005567 7.7e-103 377.9 296 68.2
THA.LOC104804073 Tarenaya hassleriana HOM05D004655 ORTHO05D005567 7.7e-103 377.9 293 70.0
BcaB08g34948 Brassica carinata HOM05D004655 ORTHO05D005567 1.0e-102 377.5 296 67.2
Cc05_g06070 Coffea canephora HOM05D004655 ORTHO05D005567 1.0e-102 377.5 275 73.8
BcaC07g41186 Brassica carinata HOM05D004655 ORTHO05D005567 2.9e-102 375.9 246 76.8
BolC8t51757H Brassica oleracea HOM05D004655 ORTHO05D005567 2.9e-102 375.9 246 76.8
Duzib052G1220 Durio zibethinus HOM05D004655 ORTHO05D005567 2.9e-102 375.9 291 71.1
Rhsim06G0153100 Rhododendron simsii HOM05D004655 ORTHO05D005567 8.6e-102 374.4 321 66.7
Sp3g34160 Schrenkiella parvula HOM05D004655 ORTHO05D005567 8.6e-102 374.4 242 78.1
A09p58650 Brassica napus HOM05D004655 ORTHO05D005567 1.1e-101 374.0 243 77.4
C08p41940 Brassica napus HOM05D004655 ORTHO05D005567 1.1e-101 374.0 246 76.4
BraA09t41251Z Brassica rapa HOM05D004655 ORTHO05D005567 1.1e-101 374.0 243 77.4
PSO541G1277 Papaver somniferum HOM05D004655 ORTHO05D005567 1.1e-101 374.0 298 68.1
Thhalv10002049m.g Eutrema salsugineum HOM05D004655 ORTHO05D005567 1.5e-101 373.6 293 68.9
Aa31LG8G17800 Aethionema arabicum HOM05D004655 ORTHO05D005567 1.9e-101 373.2 293 70.0
ATR0693G119 Amborella trichopoda HOM05D004655 ORTHO05D005567 3.3e-101 372.5 296 67.2
CARHR111640 Cardamine hirsuta HOM05D004655 ORTHO05D005567 1.2e-100 370.5 279 70.3
DCAR_012973 Daucus carota HOM05D004655 ORTHO05D005567 4.7e-100 368.6 296 67.9
AL3G54160 Arabidopsis lyrata HOM05D004655 ORTHO05D005567 6.1e-100 368.2 242 76.4
Carub.0003s3556 Capsella rubella HOM05D004655 ORTHO05D005567 2.3e-99 366.3 295 68.1
ECA246G4617 Erigeron canadensis HOM05D004655 ORTHO05D005567 1.5e-98 363.6 243 76.5
AT2G20890 Arabidopsis thaliana HOM05D004655 ORTHO05D005567 1.7e-97 360.1 280 68.2
Sabra13G0119700 Salix brachista HOM05D004655 ORTHO05D005567 2.2e-97 359.8 297 67.7
HPP92_012362 Vanilla planifolia HOM05D004655 ORTHO05D005567 8.3e-97 357.8 296 65.9
SGA_v2.0_scaffold70G23458 Striga asiatica HOM05D004655 ORTHO05D005567 1.2e-95 354.0 271 71.2
Os07g0558500 Oryza sativa ssp. japonica HOM05D004655 ORTHO05D005567 5.9e-95 351.7 235 77.0
unitig_21.g20001 Utricularia gibba HOM05D004655 ORTHO05D005567 5.9e-95 351.7 246 71.5
Aqoxy1G03905 Aquilegia oxysepala HOM05D004655 ORTHO05D005567 1.0e-94 350.9 291 67.4
Zm00001eb324100 Zea mays HOM05D004655 ORTHO05D005567 1.0e-94 350.9 244 75.0
SalBow1G2826 Salvia bowleyana HOM05D004655 ORTHO05D005567 5.0e-94 348.6 229 76.9
SGA_v2.0_scaffold34G13911 Striga asiatica HOM05D004655 ORTHO05D005567 8.6e-94 347.8 354 58.8
DCAR_019200 Daucus carota HOM05D004655 ORTHO05D005567 1.1e-93 347.4 229 77.7
SalBow7G2858 Salvia bowleyana HOM05D004655 ORTHO05D005567 1.2e-92 344.0 267 68.2
Peaxi162Scf00007g02516 Petunia axillaris HOM05D004655 ORTHO05D005567 5.2e-91 338.6 330 61.2
Duzib248G0290 Durio zibethinus HOM05D004655 ORTHO05D005567 1.2e-90 337.4 198 87.9
CAN.G508.2 Capsicum annuum HOM05D004655 ORTHO05D005567 2.6e-90 336.3 223 77.6
Nitab4.5_0000769g0070 Nicotiana tabacum HOM05D004655 ORTHO05D005567 4.1e-88 328.9 295 64.4
FAN09G1462 Fragaria x ananassa HOM05D004655 ORTHO05D005567 2.3e-86 323.2 294 62.9
Lj8C118T0 Lonicera japonica HOM05D004655 ORTHO05D005567 3.9e-86 322.4 224 77.2
Ah.01g014420 Amaranthus hybridus HOM05D004655 ORTHO05D005567 8.1e-84 314.7 230 73.0
Pp3c19_17570 Physcomitrium patens HOM05D004655 ORTHO05D005567 3.1e-83 312.8 230 69.6
Nitab4.5_0001019g0090 Nicotiana tabacum HOM05D004655 ORTHO05D005567 9.8e-82 307.8 218 73.9
Mapoly0010s0156 Marchantia polymorpha HOM05D004655 ORTHO05D005567 1.3e-81 307.4 239 67.8
Pp3c21_14540 Physcomitrium patens HOM05D004655 ORTHO05D005567 2.2e-81 306.6 234 67.5
AagrBONN_evm.TU.Sc2ySwM_344.251 Anthoceros agrestis HOM05D004655 ORTHO05D005567 3.2e-80 302.8 273 59.3
Sc12g0003940 Simmondsia chinensis HOM05D004655 ORTHO05D005567 1.2e-79 300.8 233 71.2
SMO266G0053 Selaginella moellendorffii HOM05D004655 ORTHO05D005567 1.3e-78 297.4 198 73.7
AUR62037125 Chenopodium quinoa HOM05D001718 ORTHO05D008006 5.2e-75 285.4 266 62.8
Zm00001eb106830 Zea mays HOM05D004655 ORTHO05D005567 5.2e-75 285.4 194 77.3
AUR62032764 Chenopodium quinoa HOM05D001718 ORTHO05D008006 4.9e-73 278.9 266 61.3
Cpa.g.sc34.80 Carica papaya HOM05D004655 ORTHO05D005567 2.4e-67 260.0 198 68.7
Dinv15502 Davidia involucrata HOM05D004655 ORTHO05D005567 2.2e-65 253.4 187 72.2
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 5.8e-58 228.8 217 53.9
CBR_g78876 Chara braunii HOM05D004655 ORTHO05D005567 1.7e-54 217.2 224 52.2
Cre13.g562850 Chlamydomonas reinhardtii HOM05D004655 ORTHO05D005567 1.8e-51 207.2 244 49.2
CDE05G0433 Ceratophyllum demersum HOM05D004655 ORTHO05D005567 1.4e-48 197.6 166 61.4
CDE05G0437 Ceratophyllum demersum HOM05D004655 ORTHO05D005567 2.1e-47 193.7 146 67.1
SEGI_32441 Sequoiadendron giganteum HOM05D004655 ORTHO05D005567 1.4e-40 171.0 153 58.2
MCO07G428 Micromonas commoda HOM05D004655 ORTHO05D005567 3.2e-40 169.9 238 40.3
Sed0002097 Sechium edule HOM05D004655 ORTHO05D005567 2.1e-23 114.0 292 35.6
VMungo0720G1089 Vigna mungo HOM05D004655 ORTHO05D005567 8.8e-22 108.6 59 91.5
Cpa.g.sc34.79 Carica papaya HOM05D004655 ORTHO05D005567 8.2e-20 102.1 68 79.4
ClCG02G001370 Citrullus lanatus HOM05D004655 ORTHO05D005567 4.1e-19 99.8 68 79.4
Sabra19G0118700 Salix brachista HOM05D004655 ORTHO05D005567 9.7e-13 78.6 115 47.8
Oeu029438.1 Olea europaea HOM05D004655 ORTHO05D005567 4.1e-11 73.2 42 78.6
Hma1.2p1_0479F.1_g161430 Hydrangea macrophylla HOM05D001315 ORTHO05D001618 1.2e-10 71.6 52 73.1
Glyma.15G250600 Glycine max HOM05D004655 ORTHO05D215793 5.2e-06 56.2 32 81.2
Oeu037167.1 Olea europaea HOM05D004655 ORTHO05D005567 8.8e-06 55.5 28 85.7


User provided reference genes

Program Settings