Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014376 Carpinus fangiana HOM05D000480 ORTHO05D000313 5.5e-69 264.2 139 100.0
Haze_12822 Corylus avellana HOM05D000480 ORTHO05D000313 2.3e-38 162.5 143 67.8
Cfa014370 Carpinus fangiana HOM05D000480 ORTHO05D000313 1.9e-32 142.9 143 62.2
Haze_12829 Corylus avellana HOM05D000480 ORTHO05D000313 9.5e-29 130.6 143 60.8
Cfa014373 Carpinus fangiana HOM05D000180 ORTHO05D000313 3.7e-25 118.6 149 51.0
Cfa014365 Carpinus fangiana HOM05D000480 ORTHO05D000313 6.4e-25 117.9 143 57.3
Haze_12833 Corylus avellana HOM05D000480 ORTHO05D000313 8.4e-25 117.5 110 68.2
Cfa014364 Carpinus fangiana HOM05D000480 ORTHO05D000313 1.4e-24 116.7 97 70.1
Haze_12836 Corylus avellana HOM05D000480 ORTHO05D000313 2.7e-23 112.5 147 53.1
Haze_12841 Corylus avellana HOM05D000480 ORTHO05D000313 5.6e-21 104.8 125 54.4
Cfa014598 Carpinus fangiana HOM05D000480 ORTHO05D000313 1.8e-19 99.8 145 46.9
GSVIVG01030638001 Vitis vinifera HOM05D000480 ORTHO05D000313 2.6e-18 95.9 134 45.5
Cfa014368 Carpinus fangiana HOM05D000480 ORTHO05D000313 2.9e-17 92.4 144 44.4
Cfa017739 Carpinus fangiana HOM05D000480 ORTHO05D000313 1.1e-16 90.5 144 50.7
Haze_12835 Corylus avellana HOM05D000480 ORTHO05D000313 7.8e-15 84.3 96 58.3
Cfa014369 Carpinus fangiana HOM05D000480 ORTHO05D000313 1.0e-14 84.0 99 58.6
Haze_12840 Corylus avellana HOM05D000480 ORTHO05D000313 2.8e-12 75.9 98 53.1
Haze_12832 Corylus avellana HOM05D000480 ORTHO05D000313 3.1e-11 72.4 93 51.6
Eucgr.L00452 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.7e-09 66.6 83 42.2
Potri.014G051100 Populus trichocarpa HOM05D000448 ORTHO05D000313 1.7e-09 66.6 92 42.4
Cc09_g09270 Coffea canephora HOM05D000009 ORTHO05D000313 3.8e-09 65.5 126 35.7
Eucgr.C03604 Eucalyptus grandis HOM05D000448 ORTHO05D000291 8.4e-09 64.3 93 40.9
Eucgr.L00448 Eucalyptus grandis HOM05D000448 ORTHO05D000291 8.4e-09 64.3 92 37.0
TAR375G1115 Trochodendron aralioides HOM05D000480 ORTHO05D000313 1.4e-08 63.5 87 41.4
Haze_12826 Corylus avellana HOM05D000480 ORTHO05D000313 1.9e-08 63.2 36 91.7
CAN.G1585.3 Capsicum annuum HOM05D000480 ORTHO05D000313 2.4e-08 62.8 126 31.0
Thecc.01G400000 Theobroma cacao HOM05D000480 ORTHO05D000313 2.4e-08 62.8 132 33.3
AUR62004076 Chenopodium quinoa HOM05D000480 ORTHO05D000313 4.2e-08 62.0 122 36.9
ECA248G3422 Erigeron canadensis HOM05D000480 ORTHO05D000313 5.4e-08 61.6 136 32.4
TAR375G0700 Trochodendron aralioides HOM05D000480 ORTHO05D000313 7.1e-08 61.2 82 41.5
TAR375G1019 Trochodendron aralioides HOM05D000480 ORTHO05D000313 7.1e-08 61.2 100 41.0
Eucgr.L00453 Eucalyptus grandis HOM05D000448 ORTHO05D000291 9.3e-08 60.8 102 34.3
CiPaw.04G146800 Carya illinoinensis HOM05D000448 ORTHO05D000291 1.2e-07 60.5 101 35.6
Nn6g35571 Nelumbo nucifera HOM05D000448 ORTHO05D000291 1.2e-07 60.5 95 34.7
TWI23G1224 Tripterygium wilfordii HOM05D000480 ORTHO05D000313 1.2e-07 60.5 99 35.4
Actinidia21630 Actinidia chinensis HOM05D000480 ORTHO05D000313 1.6e-07 60.1 93 35.5
Thecc.01G399500 Theobroma cacao HOM05D000480 ORTHO05D000313 2.1e-07 59.7 92 39.1
Cfa012961 Carpinus fangiana HOM05D000012 ORTHO05D008823 2.7e-07 59.3 36 83.3
Cfa012962 Carpinus fangiana HOM05D000480 ORTHO05D000313 2.7e-07 59.3 36 83.3
Duzib138G0994 Durio zibethinus HOM05D000480 ORTHO05D000291 2.7e-07 59.3 92 39.1
Thecc.01G398300 Theobroma cacao HOM05D000480 ORTHO05D000313 2.7e-07 59.3 92 40.2
AUR62007589 Chenopodium quinoa HOM05D000480 ORTHO05D000313 3.5e-07 58.9 88 40.9
PSO210G7802 Papaver somniferum HOM05D000448 ORTHO05D000291 3.5e-07 58.9 93 37.6
PSO063G0367 Papaver somniferum HOM05D000480 ORTHO05D000313 4.6e-07 58.5 135 37.0
Nn6g33764 Nelumbo nucifera HOM05D000448 ORTHO05D000291 6.0e-07 58.2 96 32.3
PGR044G2433 Punica granatum HOM05D000448 ORTHO05D000291 6.0e-07 58.2 93 36.6
TAR479G0002 Trochodendron aralioides HOM05D000448 ORTHO05D000291 6.0e-07 58.2 119 31.1
CiPaw.15G088600 Carya illinoinensis HOM05D000448 ORTHO05D000291 7.9e-07 57.8 103 37.9
Eucgr.L02912 Eucalyptus grandis HOM05D000448 ORTHO05D000291 7.9e-07 57.8 77 42.9
Hma1.2p1_0632F.1_g192470 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 7.9e-07 57.8 86 34.9
MBI18_g43125_MAGBIO Magnolia biondii HOM05D000454 ORTHO05D002637 7.9e-07 57.8 89 31.5
Sc09g0009380 Simmondsia chinensis HOM05D000448 ORTHO05D000291 7.9e-07 57.8 81 39.5
Thecc.01G398800 Theobroma cacao HOM05D000480 ORTHO05D000313 7.9e-07 57.8 105 38.1
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 7.9e-07 57.8 98 37.8
CANSAT25G0074 Cannabis sativa HOM05D000480 ORTHO05D000313 1.0e-06 57.4 108 38.0
AUR62007588 Chenopodium quinoa HOM05D000480 ORTHO05D000313 1.0e-06 57.4 126 31.7
PSO170G4483 Papaver somniferum HOM05D000448 ORTHO05D000291 1.0e-06 57.4 79 45.6
SalBow4G1636 Salvia bowleyana HOM05D000448 ORTHO05D000291 1.0e-06 57.4 60 50.0
TAR383G0566 Trochodendron aralioides HOM05D000448 ORTHO05D000313 1.0e-06 57.4 85 37.6
vmacro10493 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 1.0e-06 57.4 94 35.1
CANSAT25G3728 Cannabis sativa HOM05D000480 ORTHO05D000313 1.3e-06 57.0 60 48.3
CiPaw.14G019000 Carya illinoinensis HOM05D000448 ORTHO05D015936 1.3e-06 57.0 92 39.1
Nn1g04187 Nelumbo nucifera HOM05D000448 ORTHO05D000291 1.3e-06 57.0 82 37.8
GSVIVG01024471001 Vitis vinifera HOM05D000480 ORTHO05D000313 1.3e-06 57.0 131 32.1
Cpa.g.sc13.223 Carica papaya HOM05D000480 ORTHO05D000313 1.7e-06 56.6 120 34.2
Dinv34537 Davidia involucrata HOM05D016153 ORTHO05D013372 1.7e-06 56.6 87 41.4
Eucgr.C00845 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.7e-06 56.6 80 42.5
QL02p061382 Quercus lobata HOM05D000448 ORTHO05D000291 1.7e-06 56.6 88 35.2
Atru.chr6.1977 Acer truncatum HOM05D000448 ORTHO05D000313 2.3e-06 56.2 88 34.1
Actinidia02166 Actinidia chinensis HOM05D000480 ORTHO05D000313 2.3e-06 56.2 101 37.6
Actinidia25704 Actinidia chinensis HOM05D000448 ORTHO05D000291 2.3e-06 56.2 81 43.2
CiPaw.14G019200 Carya illinoinensis HOM05D000480 ORTHO05D000313 2.3e-06 56.2 101 35.6
COL.COLO4_37309 Corchorus olitorius HOM05D000448 ORTHO05D000291 2.3e-06 56.2 121 36.4
Eucgr.C03074 Eucalyptus grandis HOM05D000448 ORTHO05D000291 2.3e-06 56.2 126 34.1
Potri.013G017254 Populus trichocarpa HOM05D000480 ORTHO05D000313 2.3e-06 56.2 78 44.9
PGR044G1390 Punica granatum HOM05D000448 ORTHO05D000291 2.3e-06 56.2 95 32.6
Thecc.03G241100 Theobroma cacao HOM05D000480 ORTHO05D000313 2.3e-06 56.2 109 36.7
Thecc.09G311100 Theobroma cacao HOM05D000480 ORTHO05D000313 2.3e-06 56.2 109 35.8
Gohir.A12G213100 Gossypium hirsutum HOM05D000480 ORTHO05D000313 3.0e-06 55.8 108 30.6
Nn1g04194 Nelumbo nucifera HOM05D000448 ORTHO05D000291 3.0e-06 55.8 82 37.8
RcHm_v2.0_Chr2g0094191 Rosa chinensis HOM05D000448 ORTHO05D000291 3.0e-06 55.8 105 34.3
SalBow4G3166 Salvia bowleyana HOM05D000448 ORTHO05D000291 3.0e-06 55.8 60 48.3
TAR121G0001 Trochodendron aralioides HOM05D000448 ORTHO05D000291 3.0e-06 55.8 89 37.1
TAR375G1069 Trochodendron aralioides HOM05D000480 ORTHO05D000313 3.0e-06 55.8 92 37.0
vmacro03794 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 3.0e-06 55.8 94 34.0
Duzib168G1606 Durio zibethinus HOM05D000448 ORTHO05D000291 3.9e-06 55.5 101 36.6
ECA248G2383 Erigeron canadensis HOM05D000480 ORTHO05D000313 3.9e-06 55.5 122 32.0
PSO210G1616 Papaver somniferum HOM05D000448 ORTHO05D000291 3.9e-06 55.5 88 40.9
PGSC0003DMG400001695 Solanum tuberosum HOM05D012202 ORTHO05D013097 3.9e-06 55.5 93 38.7
GSVIVG01015126001 Vitis vinifera HOM05D000448 ORTHO05D000291 3.9e-06 55.5 80 42.5
CiPaw.14G018700 Carya illinoinensis HOM05D000480 ORTHO05D000313 5.1e-06 55.1 92 38.0
Gohir.D12G215600 Gossypium hirsutum HOM05D000480 ORTHO05D000313 5.1e-06 55.1 108 30.6
Gorai.008G231200 Gossypium raimondii HOM05D000480 ORTHO05D000313 5.1e-06 55.1 108 30.6
PSO782G5375 Papaver somniferum HOM05D000480 ORTHO05D000313 5.1e-06 55.1 135 36.3
PGR142G3845 Punica granatum HOM05D000448 ORTHO05D000291 5.1e-06 55.1 82 40.2
Rhsim05G0013100 Rhododendron simsii HOM05D000448 ORTHO05D000291 6.6e-06 54.7 82 36.6
Sabra06G0172800 Salix brachista HOM05D000448 ORTHO05D000291 6.6e-06 54.7 89 36.0
vmacro17172 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 6.6e-06 54.7 83 34.9
BcaC01g06095 Brassica carinata HOM05D000448 ORTHO05D000291 8.7e-06 54.3 113 34.5
BolC3t14303H Brassica oleracea HOM05D000448 ORTHO05D000291 8.7e-06 54.3 113 34.5
Lsat_1_v5_gn_5_29501 Lactuca sativa HOM05D000448 ORTHO05D000291 8.7e-06 54.3 102 34.3
Manes.08G063800 Manihot esculenta HOM05D000480 ORTHO05D000313 8.7e-06 54.3 93 36.6
Oeu019260.1 Olea europaea HOM05D007843 ORTHO05D003639 8.7e-06 54.3 130 30.0
Sc09g0009410 Simmondsia chinensis HOM05D000448 ORTHO05D000291 8.7e-06 54.3 50 48.0
TAR626G0633 Trochodendron aralioides HOM05D000448 ORTHO05D000291 8.7e-06 54.3 84 38.1


User provided reference genes

Program Settings