Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014334 Carpinus fangiana HOM05D009830 ORTHO05D011381 8.3e-35 149.8 76 100.0
Haze_12789 Corylus avellana HOM05D009830 ORTHO05D011381 3.3e-31 137.9 76 93.4
CiPaw.03G157300 Carya illinoinensis HOM05D009830 ORTHO05D011381 5.6e-15 84.0 77 63.6
Prupe.3G212800 Prunus persica HOM05D009830 ORTHO05D011381 1.3e-11 72.8 77 62.3
Nn1g03405 Nelumbo nucifera HOM05D009830 ORTHO05D011381 5.4e-10 67.4 78 59.0
Potri.014G156600 Populus trichocarpa HOM05D009830 ORTHO05D011381 9.2e-10 66.6 78 56.4
Phvul.008G211300 Phaseolus vulgaris HOM05D009830 ORTHO05D011381 1.2e-09 66.2 76 53.9
Glyma.14G046400 Glycine max HOM05D009830 ORTHO05D011381 2.1e-09 65.5 76 52.6
CSS0039796 Camellia sinensis var. sinensis HOM05D009830 ORTHO05D011381 2.7e-09 65.1 75 54.7
Gohir.D11G160600 Gossypium hirsutum HOM05D013710 ORTHO05D011381 2.7e-09 65.1 84 53.6
Gorai.007G171200 Gossypium raimondii HOM05D013710 ORTHO05D011381 2.7e-09 65.1 84 53.6
Gohir.A11G153800 Gossypium hirsutum HOM05D013710 ORTHO05D011381 3.5e-09 64.7 84 53.6
Glyma.02G270600 Glycine max HOM05D009830 ORTHO05D011381 4.6e-09 64.3 76 52.6
Lalb_Chr04g0249881 Lupinus albus HOM05D009830 ORTHO05D011381 4.6e-09 64.3 76 47.4
Thecc.01G179900 Theobroma cacao HOM05D013710 ORTHO05D011381 6.0e-09 63.9 84 54.8
COL.COLO4_21851 Corchorus olitorius HOM05D013710 ORTHO05D011381 1.0e-08 63.2 90 53.3
Potri.002G226300 Populus trichocarpa HOM05D009830 ORTHO05D011381 1.3e-08 62.8 78 53.8
TPR.G13535 Trifolium pratense HOM05D009830 ORTHO05D011381 3.9e-08 61.2 76 51.3
Sabra02G0173100 Salix brachista HOM05D009830 ORTHO05D011381 1.5e-07 59.3 79 54.4
Lalb_Chr10g0105701 Lupinus albus HOM05D009830 ORTHO05D011381 1.9e-07 58.9 76 50.0
Medtr5g085990 Medicago truncatula HOM05D009830 ORTHO05D011381 7.3e-07 57.0 81 49.4
CSS0039346 Camellia sinensis var. sinensis HOM05D009830 ORTHO05D011381 1.6e-06 55.8 76 50.0
CiPaw.04G112100 Carya illinoinensis HOM05D009830 ORTHO05D011381 1.6e-06 55.8 76 55.3
Medtr3g080060 Medicago truncatula HOM05D009830 ORTHO05D011381 1.6e-06 55.8 76 51.3
Nn1g07260 Nelumbo nucifera HOM05D009830 ORTHO05D011381 1.6e-06 55.8 79 46.8
TPR.G14443 Trifolium pratense HOM05D009830 ORTHO05D011381 2.1e-06 55.5 75 45.3
CSS0034930 Camellia sinensis var. sinensis HOM05D009830 ORTHO05D011381 4.7e-06 54.3 76 48.7
DCAR_012933 Daucus carota HOM05D009830 ORTHO05D011381 6.2e-06 53.9 98 45.9
Gohir.D08G060250 Gossypium hirsutum HOM05D032174 ORTHO05D046927 6.2e-06 53.9 79 46.8
Gorai.004G062300 Gossypium raimondii HOM05D032174 ORTHO05D046927 6.2e-06 53.9 79 46.8


User provided reference genes

Program Settings