Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014252 Carpinus fangiana HOM05D007219 ORTHO05D008995 2.9e-79 298.5 153 100.0
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 3.5e-64 248.4 138 89.9
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 8.0e-53 210.7 138 76.1
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 1.6e-48 196.4 138 71.7
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 1.1e-46 190.3 137 67.9
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 1.9e-46 189.5 143 63.6
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 1.9e-46 189.5 143 63.6
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 1.9e-46 189.5 137 67.9
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 2.5e-46 189.1 137 67.9
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 4.2e-46 188.3 137 67.2
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 5.5e-46 188.0 137 65.7
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 1.2e-45 186.8 137 65.7
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 6.1e-45 184.5 133 68.4
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 1.0e-44 183.7 132 67.4
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 3.0e-44 182.2 133 69.2
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 3.0e-44 182.2 132 66.7
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 3.0e-44 182.2 133 66.2
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 4.0e-44 181.8 133 67.7
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 8.8e-44 180.6 131 69.5
AUR62017530 Chenopodium quinoa HOM05D007219 ORTHO05D008995 1.2e-43 180.3 134 65.7
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 1.2e-43 180.3 136 62.5
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 1.5e-43 179.9 134 67.2
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 1.5e-43 179.9 138 65.2
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 2.6e-43 179.1 136 63.2
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 2.6e-43 179.1 133 65.4
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 2.6e-43 179.1 133 66.2
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 3.4e-43 178.7 136 64.7
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 7.5e-43 177.6 133 64.7
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 9.8e-43 177.2 136 61.8
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 1.3e-42 176.8 133 64.7
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 1.3e-42 176.8 133 66.2
SGA_v2.0_scaffold73G24522 Striga asiatica HOM05D007219 ORTHO05D008995 2.2e-42 176.0 133 61.7
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 2.8e-42 175.6 133 64.7
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 2.8e-42 175.6 134 63.4
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 6.3e-42 174.5 133 64.7
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 8.3e-42 174.1 133 66.2
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 8.3e-42 174.1 135 64.4
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 8.3e-42 174.1 131 66.4
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 1.1e-41 173.7 138 63.0
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 1.1e-41 173.7 133 66.2
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 1.1e-41 173.7 132 63.6
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 1.1e-41 173.7 133 62.4
Gohir.D07G173000 Gossypium hirsutum HOM05D007219 ORTHO05D008995 1.4e-41 173.3 133 64.7
Gorai.001G193200 Gossypium raimondii HOM05D007219 ORTHO05D008995 1.4e-41 173.3 133 64.7
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 1.8e-41 172.9 137 62.8
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 1.8e-41 172.9 133 63.9
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 2.4e-41 172.6 133 64.7
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 2.4e-41 172.6 133 63.9
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 4.1e-41 171.8 133 60.2
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 4.1e-41 171.8 133 60.2
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 9.2e-41 170.6 133 60.9
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 1.2e-40 170.2 132 61.4
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 1.6e-40 169.9 136 61.8
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 1.6e-40 169.9 133 60.2
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 1.6e-40 169.9 138 63.0
Sc21g0000880 Simmondsia chinensis HOM05D007219 ORTHO05D008995 2.7e-40 169.1 135 60.7
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 3.5e-40 168.7 133 60.2
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 3.5e-40 168.7 133 62.4
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 3.5e-40 168.7 132 62.1
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 3.5e-40 168.7 133 60.2
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 1.3e-39 166.8 133 60.2
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 1.7e-39 166.4 134 61.2
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 1.7e-39 166.4 133 60.9
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 2.9e-39 165.6 133 61.7
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 2.9e-39 165.6 135 59.3
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 3.8e-39 165.2 137 57.7
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 5.0e-39 164.9 133 59.4
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 6.6e-39 164.5 135 57.8
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 6.6e-39 164.5 133 58.6
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 6.6e-39 164.5 133 59.4
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 1.9e-38 162.9 132 59.8
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 3.3e-38 162.2 133 59.4
PSO302G0207 Papaver somniferum HOM05D007219 ORTHO05D008995 3.3e-38 162.2 133 60.2
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 5.6e-38 161.4 138 57.2
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 1.2e-37 160.2 136 56.6
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 1.6e-37 159.8 135 56.3
HPP92_020392 Vanilla planifolia HOM05D007219 ORTHO05D008995 3.6e-37 158.7 131 59.5
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 4.7e-37 158.3 134 57.5
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 1.0e-36 157.1 135 57.8
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 2.3e-36 156.0 120 64.2
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 1.5e-35 153.3 120 61.7
FAN05G4854 Fragaria x ananassa HOM05D007219 ORTHO05D008995 2.9e-34 149.1 140 55.7
Zm00001eb401150 Zea mays HOM05D007219 ORTHO05D008995 2.4e-33 146.0 129 55.8
Os03g0194400 Oryza sativa ssp. japonica HOM05D007219 ORTHO05D008995 3.5e-32 142.1 136 52.9
MD17G1111700 Malus domestica HOM05D007219 ORTHO05D008995 1.3e-31 140.2 142 52.8
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 3.0e-31 139.0 109 64.2
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 6.6e-31 137.9 131 51.9
SMO115G0308 Selaginella moellendorffii HOM05D007219 ORTHO05D008995 9.8e-27 124.0 133 47.4
EL10Ac9g22747 Beta vulgaris HOM05D007219 ORTHO05D008995 1.7e-26 123.2 133 51.9
SEGI_01956 Sequoiadendron giganteum HOM05D007219 ORTHO05D008995 7.0e-25 117.9 108 52.8
Mapoly0089s0028 Marchantia polymorpha HOM05D007219 ORTHO05D008995 1.7e-23 113.2 137 43.8
VMungo0540G0477 Vigna mungo HOM05D007219 ORTHO05D008995 3.6e-21 105.5 61 78.7
MCO15G116 Micromonas commoda HOM05D007219 ORTHO05D008995 1.7e-18 96.7 130 41.5
Ah.14g082820 Amaranthus hybridus HOM05D007219 ORTHO05D008995 7.1e-17 91.3 53 77.4
Actinidia09773 Actinidia chinensis HOM05D007219 ORTHO05D008995 4.6e-16 88.6 54 75.9
ClCG02G002620 Citrullus lanatus HOM05D007219 ORTHO05D008995 3.0e-15 85.9 53 77.4
AUR62015074 Chenopodium quinoa HOM05D007219 ORTHO05D008995 1.1e-14 84.0 52 73.1
Ca_16365_v3 Cicer arietinum L. HOM05D007219 ORTHO05D008995 2.5e-14 82.8 51 68.6
Rhsim06G0172900 Rhododendron simsii HOM05D007219 ORTHO05D008995 5.6e-14 81.6 80 53.8
CBR_g31837 Chara braunii HOM05D007219 ORTHO05D008995 1.3e-10 70.5 209 25.8
Nitab4.5_0002877g0050 Nicotiana tabacum HOM05D007219 ORTHO05D008995 1.5e-06 57.0 28 89.3


User provided reference genes

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