Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014230 Carpinus fangiana HOM05D008806 ORTHO05D003654 1.1e-105 386.7 201 100.0
Haze_12634 Corylus avellana HOM05D008806 ORTHO05D003654 1.5e-75 286.6 200 78.5
CiPaw.03G281200 Carya illinoinensis HOM05D005871 ORTHO05D003654 1.4e-52 210.3 213 58.2
Cfa017914 Carpinus fangiana HOM05D000074 ORTHO05D000220 7.8e-48 194.5 104 92.3
QL06p003419 Quercus lobata HOM05D008806 ORTHO05D003654 1.3e-39 167.2 211 55.5
QL08p028006 Quercus lobata HOM05D008806 ORTHO05D003654 1.2e-35 154.1 210 52.4
FAN02G3820 Fragaria x ananassa HOM05D005871 ORTHO05D003654 8.9e-28 127.9 190 45.8
TAR626G0615 Trochodendron aralioides HOM05D005871 ORTHO05D003654 2.2e-26 123.2 203 41.4
Prupe.3G198500 Prunus persica HOM05D008806 ORTHO05D003654 3.2e-25 119.4 211 43.1
FAN09G0572 Fragaria x ananassa HOM05D008806 ORTHO05D003654 1.7e-23 113.6 154 48.7
FvH4_6g40700 Fragaria vesca HOM05D008806 ORTHO05D003654 5.1e-23 112.1 189 42.3
FAN05G0544 Fragaria x ananassa HOM05D008806 ORTHO05D003654 2.5e-22 109.8 152 46.7
Duzib138G0120 Durio zibethinus HOM05D008806 ORTHO05D003654 4.7e-21 105.5 196 39.8
Duzib133G1309 Durio zibethinus HOM05D008806 ORTHO05D003654 9.0e-20 101.3 203 39.4
Thecc.01G195400 Theobroma cacao HOM05D008806 ORTHO05D003654 4.4e-19 99.0 184 39.7
Ciclev10016749m.g Citrus clementina HOM05D008806 ORTHO05D003654 1.7e-18 97.1 200 39.0
Nn1g07488 Nelumbo nucifera HOM05D005871 ORTHO05D003654 4.9e-18 95.5 180 40.0
FAN14G2730 Fragaria x ananassa HOM05D008806 ORTHO05D003654 1.1e-17 94.4 156 41.7
Dinv26612 Davidia involucrata HOM05D008806 ORTHO05D003654 1.2e-16 90.9 151 41.7
Gohir.D07G198000 Gossypium hirsutum HOM05D008806 ORTHO05D003654 2.1e-16 90.1 174 40.2
Gorai.001G221600 Gossypium raimondii HOM05D008806 ORTHO05D003654 2.1e-16 90.1 174 40.2
Gohir.A07G191701 Gossypium hirsutum HOM05D008806 ORTHO05D003654 1.7e-15 87.0 174 39.7
Nn1g03208 Nelumbo nucifera HOM05D005871 ORTHO05D003654 3.0e-15 86.3 190 36.3
Nitab4.5_0001701g0160 Nicotiana tabacum HOM05D016037 ORTHO05D003654 3.0e-15 86.3 194 35.6
TAR629G2179 Trochodendron aralioides HOM05D005871 ORTHO05D003654 1.5e-14 84.0 156 36.5
Sed0022932 Sechium edule HOM05D008806 ORTHO05D003654 3.3e-14 82.8 182 40.7
Manes.12G064700 Manihot esculenta HOM05D008806 ORTHO05D003654 4.3e-14 82.4 179 38.5
Gohir.A07G191600 Gossypium hirsutum HOM05D008806 ORTHO05D003654 1.3e-13 80.9 176 39.2
Gohir.D08G035400 Gossypium hirsutum HOM05D005871 ORTHO05D003654 1.6e-13 80.5 185 35.1
Gorai.004G033400 Gossypium raimondii HOM05D005871 ORTHO05D003654 2.1e-13 80.1 189 34.4
Lj6g0021132 Lotus japonicus HOM05D005871 ORTHO05D003654 2.8e-13 79.7 233 30.9
CiPaw.11G202600 Carya illinoinensis HOM05D005871 ORTHO05D003654 4.8e-13 79.0 194 34.5
MD03G1184900 Malus domestica HOM05D005871 ORTHO05D003654 4.8e-13 79.0 216 33.8
Rhsim06G0176100 Rhododendron simsii HOM05D008806 ORTHO05D003654 4.8e-13 79.0 202 34.7
TWI38G0819 Tripterygium wilfordii HOM05D005871 ORTHO05D003654 8.1e-13 78.2 210 30.5
COL.COLO4_09813 Corchorus olitorius HOM05D005871 ORTHO05D003654 1.8e-12 77.0 229 32.8
Sabra14G0126900 Salix brachista HOM05D008806 ORTHO05D003654 1.8e-12 77.0 171 40.4
Hma1.2p1_0657F.1_g196840 Hydrangea macrophylla HOM05D005871 ORTHO05D003654 4.0e-12 75.9 236 32.2
LjContig00081g0024091 Lotus japonicus HOM05D014380 ORTHO05D017040 4.0e-12 75.9 189 34.9
Gohir.D07G197900 Gossypium hirsutum HOM05D008806 ORTHO05D003654 5.3e-12 75.5 174 34.5
Gorai.001G221500 Gossypium raimondii HOM05D008806 ORTHO05D003654 5.3e-12 75.5 174 35.1
Gohir.A04G006400 Gossypium hirsutum HOM05D005871 ORTHO05D003654 6.9e-12 75.1 225 32.4
Potri.001G366500 Populus trichocarpa HOM05D005871 ORTHO05D003654 1.2e-11 74.3 262 29.4
Glyma.18G078200 Glycine max HOM05D005871 ORTHO05D003654 2.0e-11 73.6 231 32.5
QL05p068166 Quercus lobata HOM05D005871 ORTHO05D003654 2.0e-11 73.6 200 32.0
Phvul.008G278200 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 2.6e-11 73.2 208 32.7
Thecc.07G015800 Theobroma cacao HOM05D005871 ORTHO05D003654 2.6e-11 73.2 251 33.5
TWI36G1583 Tripterygium wilfordii HOM05D008806 ORTHO05D003654 2.6e-11 73.2 178 35.4
Haze_09808 Corylus avellana HOM05D005871 ORTHO05D003654 4.5e-11 72.4 200 36.5
Gorai.009G449600 Gossypium raimondii HOM05D005871 ORTHO05D003654 5.8e-11 72.0 228 28.9
Duzib170G1062 Durio zibethinus HOM05D005871 ORTHO05D003654 7.6e-11 71.6 225 32.9
Phvul.006G056300 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 9.9e-11 71.2 222 31.1
Glyma.02G299500 Glycine max HOM05D005871 ORTHO05D003654 1.3e-10 70.9 226 28.8
Gohir.D05G383000 Gossypium hirsutum HOM05D005871 ORTHO05D003654 1.3e-10 70.9 218 28.9
Prupe.4G241600 Prunus persica HOM05D005871 ORTHO05D003654 1.3e-10 70.9 208 33.2
QL08p004709 Quercus lobata HOM05D005871 ORTHO05D003654 1.3e-10 70.9 230 32.2
Potri.014G166900 Populus trichocarpa HOM05D008806 ORTHO05D003654 1.7e-10 70.5 210 34.3
Cfa020208 Carpinus fangiana HOM05D005871 ORTHO05D003654 2.9e-10 69.7 202 32.2
Glyma.08G328600 Glycine max HOM05D005871 ORTHO05D003654 2.9e-10 69.7 220 33.2
Gohir.D05G383100 Gossypium hirsutum HOM05D005871 ORTHO05D003654 2.9e-10 69.7 234 29.1
Lalb_Chr04g0247911 Lupinus albus HOM05D005871 ORTHO05D003654 2.9e-10 69.7 223 31.8
Manes.03G140300 Manihot esculenta HOM05D005871 ORTHO05D003654 2.9e-10 69.7 257 33.5
PGSC0003DMG400017373 Solanum tuberosum HOM05D016037 ORTHO05D003654 2.9e-10 69.7 186 31.7
VMungo0647G1579 Vigna mungo HOM05D005871 ORTHO05D003654 2.9e-10 69.7 226 30.1
Eucgr.F02056 Eucalyptus grandis HOM05D005871 ORTHO05D003654 4.9e-10 68.9 239 31.0
TWI39G0465 Tripterygium wilfordii HOM05D005871 ORTHO05D003654 4.9e-10 68.9 222 29.7
Ah.09g234010 Amaranthus hybridus HOM05D005871 ORTHO05D003654 6.4e-10 68.6 201 33.8
Phvul.008G289200 Phaseolus vulgaris HOM05D014380 ORTHO05D017040 6.4e-10 68.6 183 35.0
PGR083G2866 Punica granatum HOM05D005871 ORTHO05D003654 6.4e-10 68.6 231 29.9
SalBow7G0966 Salvia bowleyana HOM05D005871 ORTHO05D003654 6.4e-10 68.6 202 31.2
CiPaw.12G137100 Carya illinoinensis HOM05D005871 ORTHO05D003654 8.4e-10 68.2 218 33.9
TPR.G35473 Trifolium pratense HOM05D005871 ORTHO05D003654 8.4e-10 68.2 193 31.6
Gohir.A08G024900 Gossypium hirsutum HOM05D005871 ORTHO05D003654 1.1e-09 67.8 187 33.2
Atru.chr6.3383_Atru.chr6.3384 Acer truncatum HOM05D008806 ORTHO05D003654 1.9e-09 67.0 180 33.9
Gorai.009G449400 Gossypium raimondii HOM05D005871 ORTHO05D003654 1.9e-09 67.0 205 29.8
Manes.03G140301 Manihot esculenta HOM05D005871 ORTHO05D003654 1.9e-09 67.0 231 32.9
SGA_v2.0_scaffold73G24498 Striga asiatica HOM05D016037 ORTHO05D003654 1.9e-09 67.0 216 29.6
Eucgr.F02055 Eucalyptus grandis HOM05D005871 ORTHO05D003654 2.4e-09 66.6 238 31.9
Glyma.14G014200 Glycine max HOM05D005871 ORTHO05D003654 2.4e-09 66.6 233 28.3
Gohir.D05G382900 Gossypium hirsutum HOM05D005871 ORTHO05D003654 2.4e-09 66.6 208 29.8
Lj6g0021470 Lotus japonicus HOM05D005871 ORTHO05D003654 3.2e-09 66.2 239 28.9
TAR629G1912 Trochodendron aralioides HOM05D005871 ORTHO05D003654 3.2e-09 66.2 182 33.5
ClCG02G002830 Citrullus lanatus HOM05D008806 ORTHO05D003654 4.2e-09 65.9 181 36.5
Manes.13G062200 Manihot esculenta HOM05D008806 ORTHO05D003654 4.2e-09 65.9 199 33.2
Medtr5g098580 Medicago truncatula HOM05D014380 ORTHO05D017040 4.2e-09 65.9 189 31.7
Sp3g11300 Schrenkiella parvula HOM05D010616 ORTHO05D003654 4.2e-09 65.9 184 34.2
TWI38G1492 Tripterygium wilfordii HOM05D005871 ORTHO05D003654 4.2e-09 65.9 186 29.0
Solyc07g045530.2 Solanum lycopersicum HOM05D016037 ORTHO05D003654 7.1e-09 65.1 212 30.7
Manes.15G061300 Manihot esculenta HOM05D005871 ORTHO05D003654 1.6e-08 63.9 195 31.8
Lalb_Chr18g0057151 Lupinus albus HOM05D005871 ORTHO05D003654 3.5e-08 62.8 215 29.3
TPR.G8596 Trifolium pratense HOM05D005871 ORTHO05D003654 3.5e-08 62.8 218 28.4
Glyma.02G309000 Glycine max HOM05D014380 ORTHO05D017040 4.6e-08 62.4 182 32.4
Sed0025236 Sechium edule HOM05D008806 ORTHO05D003654 4.6e-08 62.4 161 34.8
MSTRG.6638 Avicennia marina HOM05D016037 ORTHO05D003654 6.0e-08 62.0 182 30.8
Psat0s4683g0040 Pisum sativum HOM05D005871 ORTHO05D003654 6.0e-08 62.0 227 27.8
Cpa.g.sc1092.4 Carica papaya HOM05D005871 ORTHO05D003654 7.9e-08 61.6 216 27.3
Peaxi162Scf00802g10028 Petunia axillaris HOM05D016037 ORTHO05D003654 7.9e-08 61.6 212 27.8
Medtr5g095630 Medicago truncatula HOM05D005871 ORTHO05D003654 1.3e-07 60.8 221 29.0
Psat1g173400 Pisum sativum HOM05D005871 ORTHO05D003654 1.3e-07 60.8 191 28.8
THA.LOC104822734 Tarenaya hassleriana HOM05D010616 ORTHO05D003654 1.3e-07 60.8 171 31.6
Atru.chr2.3672 Acer truncatum HOM05D005871 ORTHO05D003654 1.8e-07 60.5 64 53.1
Rhsim06G0176000 Rhododendron simsii HOM05D005871 ORTHO05D003654 1.8e-07 60.5 194 31.4
VMungo0540G0718 Vigna mungo HOM05D005871 ORTHO05D003654 1.8e-07 60.5 219 32.0
Phvul.006G140600 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 2.3e-07 60.1 220 30.0
THA.LOC104810289 Tarenaya hassleriana HOM05D010616 ORTHO05D003654 2.3e-07 60.1 189 33.9
VMungo0540G2170 Vigna mungo HOM05D005871 ORTHO05D003654 2.3e-07 60.1 225 29.3
CANSAT64G0243 Cannabis sativa HOM05D008806 ORTHO05D003654 3.0e-07 59.7 201 31.8
TPR.G8607 Trifolium pratense HOM05D005871 ORTHO05D003654 3.0e-07 59.7 228 28.5
Thecc.06G238200 Theobroma cacao HOM05D005871 ORTHO05D003654 3.9e-07 59.3 190 28.9
CANSAT11G0434 Cannabis sativa HOM05D005871 ORTHO05D003654 5.1e-07 58.9 63 52.4
MELO3C028684.2 Cucumis melo HOM05D008806 ORTHO05D003654 5.1e-07 58.9 194 33.0
Migut.M00045 Erythranthe guttata HOM05D005871 ORTHO05D003654 6.7e-07 58.5 182 31.9
Thhalv10021559m.g Eutrema salsugineum HOM05D010616 ORTHO05D003654 6.7e-07 58.5 170 28.8
Manes.12G066000 Manihot esculenta HOM05D008806 ORTHO05D003654 8.7e-07 58.2 71 49.3
Psat2g007960 Pisum sativum HOM05D005871 ORTHO05D003654 8.7e-07 58.2 118 36.4
Actinidia02292 Actinidia chinensis HOM05D005871 ORTHO05D003654 1.5e-06 57.4 211 28.0
Oeu029962.1 Olea europaea HOM05D016037 ORTHO05D003654 2.5e-06 56.6 166 26.5
Sabra16G0239800 Salix brachista HOM05D005871 ORTHO05D003654 3.3e-06 56.2 234 29.1
Ah.04g166520 Amaranthus hybridus HOM05D005871 ORTHO05D003654 5.6e-06 55.5 223 28.7
Gohir.D06G162300 Gossypium hirsutum HOM05D005871 ORTHO05D003654 5.6e-06 55.5 197 26.9
Psat2g008040 Pisum sativum HOM05D005871 ORTHO05D003654 5.6e-06 55.5 119 32.8
PGR083G1770 Punica granatum HOM05D008806 ORTHO05D003654 7.4e-06 55.1 192 27.1
Sed0014857 Sechium edule HOM05D005871 ORTHO05D003654 7.4e-06 55.1 196 32.7
Gorai.009G449500 Gossypium raimondii HOM05D005871 ORTHO05D003654 9.6e-06 54.7 196 29.6
Gorai.010G189400 Gossypium raimondii HOM05D005871 ORTHO05D003654 9.6e-06 54.7 222 26.1


User provided reference genes

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