Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 1.0e-75 286.6 140 100.0
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 3.4e-58 228.4 114 97.4
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 2.4e-48 195.7 118 80.5
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 3.5e-47 191.8 114 82.5
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 4.3e-45 184.9 118 78.0
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 1.8e-43 179.5 118 72.9
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 2.4e-43 179.1 118 74.6
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 1.2e-42 176.8 119 75.6
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 1.2e-42 176.8 118 73.7
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 1.2e-42 176.8 119 74.8
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 9.9e-42 173.7 119 73.9
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 9.9e-42 173.7 119 73.9
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 2.9e-41 172.2 119 73.9
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 2.4e-40 169.1 119 71.4
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 7.1e-40 167.5 121 70.2
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 2.7e-39 165.6 118 72.9
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 4.6e-39 164.9 119 69.7
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 7.8e-39 164.1 124 70.2
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 2.3e-38 162.5 118 68.6
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 5.1e-38 161.4 118 68.6
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 6.6e-38 161.0 123 68.3
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 6.6e-38 161.0 125 67.2
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 5.6e-37 157.9 118 68.6
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 5.6e-37 157.9 121 68.6
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 9.6e-37 157.1 118 67.8
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 1.3e-36 156.8 118 67.8
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.3e-36 156.8 118 67.8
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.3e-36 156.8 118 67.8
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 1.6e-36 156.4 120 69.2
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 1.6e-36 156.4 123 68.3
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 2.1e-36 156.0 122 65.6
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 3.6e-36 155.2 118 66.9
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 4.8e-36 154.8 118 66.9
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 6.2e-36 154.5 119 67.2
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 1.8e-35 152.9 121 64.5
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 4.0e-35 151.8 122 63.1
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 4.0e-35 151.8 119 66.4
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 9.0e-35 150.6 130 63.8
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 2.0e-34 149.4 119 64.7
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 4.5e-34 148.3 121 67.8
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 5.8e-34 147.9 119 63.9
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 7.6e-34 147.5 121 66.1
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 7.6e-34 147.5 161 49.7
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 1.7e-33 146.4 119 63.9
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 2.2e-33 146.0 118 66.1
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 3.8e-33 145.2 110 66.4
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 6.4e-33 144.4 123 61.8
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 6.4e-33 144.4 123 61.0
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 6.4e-33 144.4 129 62.0
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 6.4e-33 144.4 119 63.0
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 8.4e-33 144.1 115 64.3
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 8.4e-33 144.1 119 63.9
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 1.1e-32 143.7 118 67.8
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 3.2e-32 142.1 110 65.5
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 5.4e-32 141.4 126 61.1
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 5.4e-32 141.4 126 61.1
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 5.4e-32 141.4 119 63.9
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 7.1e-32 141.0 125 60.8
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 2.1e-31 139.4 126 60.3
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 2.1e-31 139.4 129 57.4
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 2.7e-31 139.0 125 60.0
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 2.7e-31 139.0 96 69.8
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 3.5e-31 138.7 73 87.7
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 4.6e-31 138.3 131 58.0
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 6.0e-31 137.9 110 64.5
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 7.9e-31 137.5 113 63.7
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 7.9e-31 137.5 118 59.3
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 1.3e-30 136.7 125 57.6
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 1.8e-30 136.3 112 63.4
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 1.8e-30 136.3 125 59.2
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 2.3e-30 136.0 126 57.9
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 2.3e-30 136.0 98 68.4
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 5.1e-30 134.8 123 59.3
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 8.7e-30 134.0 119 62.2
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 1.5e-29 133.3 98 67.3
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 1.9e-29 132.9 122 60.7
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 5.6e-29 131.3 130 54.6
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 9.6e-29 130.6 82 79.3
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 9.6e-29 130.6 119 62.2
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 1.3e-28 130.2 119 63.0
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 4.8e-28 128.3 73 82.2
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 6.2e-28 127.9 111 60.4
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 1.1e-27 127.1 77 77.9
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 1.4e-27 126.7 109 62.4
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 5.3e-27 124.8 72 80.6
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 6.9e-27 124.4 118 57.6
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 9.0e-27 124.0 67 82.1
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 2.0e-26 122.9 107 60.7
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 9.9e-26 120.6 127 55.1
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 3.2e-24 115.5 123 52.0
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 2.3e-22 109.4 71 73.2
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 2.8e-20 102.4 70 62.9
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 3.7e-20 102.1 70 64.3
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 3.4e-18 95.5 47 91.5
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 1.3e-17 93.6 48 85.4
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 1.0e-14 84.0 69 55.1
CSS0040675 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 6.7e-14 81.3 72 61.1
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 1.6e-12 76.6 124 38.7
COL.COLO4_33329 Corchorus olitorius HOM05D007442 ORTHO05D009284 2.1e-12 76.3 74 60.8
MELO3C025961.2 Cucumis melo HOM05D007442 ORTHO05D009284 1.4e-11 73.6 77 57.1
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 1.2e-10 70.5 85 42.4
Atru.chr6.3394 Acer truncatum HOM05D007442 ORTHO05D009284 3.2e-08 62.4 77 50.6
AUR62029117 Chenopodium quinoa HOM05D005849 ORTHO05D004704 7.9e-07 57.8 75 54.7


User provided reference genes

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