Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 6.5e-194 680.6 366 100.0
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 7.0e-180 634.0 396 88.6
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 2.2e-157 559.3 363 78.5
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 2.7e-155 552.4 366 75.4
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 4.2e-132 475.3 366 65.8
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 5.4e-132 474.9 365 65.8
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 1.5e-129 466.8 366 66.4
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 9.0e-127 457.6 368 64.4
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 9.0e-127 457.6 371 64.2
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 4.4e-126 455.3 365 63.3
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 7.6e-126 454.5 366 65.6
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 9.9e-126 454.1 365 63.6
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 1.3e-125 453.8 366 62.0
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 1.7e-125 453.4 365 63.0
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 1.4e-124 450.3 371 62.5
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 5.4e-124 448.4 368 62.5
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 1.2e-123 447.2 363 61.4
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 7.9e-123 444.5 367 61.3
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 1.7e-122 443.4 365 64.4
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 1.6e-120 436.8 367 62.7
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 1.6e-120 436.8 261 93.9
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 3.1e-119 432.6 369 61.5
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 1.2e-118 430.6 369 60.7
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 1.0e-114 417.5 363 62.5
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 1.8e-114 416.8 367 60.8
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 3.3e-113 412.5 371 58.2
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 9.6e-113 411.0 369 57.2
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 1.3e-112 410.6 356 61.0
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 8.1e-112 407.9 371 57.4
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 8.1e-112 407.9 360 61.1
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 9.0e-111 404.4 370 60.3
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 1.2e-110 404.1 363 62.0
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 2.0e-110 403.3 366 58.5
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 2.6e-110 402.9 363 61.4
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 3.4e-110 402.5 374 57.2
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 4.5e-110 402.1 358 60.3
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 4.5e-110 402.1 321 64.5
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 4.5e-110 402.1 371 58.5
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 7.6e-110 401.4 348 59.5
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 2.2e-109 399.8 348 60.6
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 6.5e-109 398.3 366 58.7
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 1.4e-108 397.1 368 55.7
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 3.2e-108 396.0 359 61.3
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 3.2e-108 396.0 374 56.4
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 7.1e-108 394.8 364 59.6
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 4.6e-107 392.1 248 71.4
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 7.9e-107 391.3 350 59.4
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 2.3e-106 389.8 361 58.4
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 3.0e-106 389.4 323 66.3
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 6.7e-106 388.3 390 55.9
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 6.7e-106 388.3 390 55.9
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 2.5e-105 386.3 365 57.0
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 1.6e-104 383.6 364 55.2
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 2.1e-104 383.3 367 56.7
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 8.2e-104 381.3 364 54.9
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 8.2e-104 381.3 364 54.9
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 8.2e-104 381.3 360 57.8
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 2.4e-103 379.8 356 56.7
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 4.1e-103 379.0 367 54.5
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 5.3e-103 378.6 362 56.9
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 5.3e-103 378.6 251 70.5
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 6.9e-103 378.3 364 54.9
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 9.0e-103 377.9 365 55.1
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 2.0e-102 376.7 251 70.5
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 2.6e-102 376.3 243 74.9
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 3.4e-102 375.9 369 59.1
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 7.6e-102 374.8 361 60.7
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 2.2e-101 373.2 363 54.8
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 5.0e-101 372.1 364 54.4
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 6.5e-101 371.7 356 57.0
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 8.5e-101 371.3 452 49.8
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 1.4e-100 370.5 290 61.7
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 3.2e-100 369.4 363 54.0
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 5.5e-100 368.6 368 54.1
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 1.9e-97 360.1 243 68.3
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 2.5e-97 359.8 365 58.1
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 9.7e-97 357.8 355 56.9
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 6.3e-96 355.1 249 65.9
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 6.3e-96 355.1 383 52.2
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 2.6e-94 349.7 240 68.8
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 1.3e-93 347.4 233 71.2
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 1.3e-93 347.4 358 52.0
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 3.8e-93 345.9 367 52.3
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 7.2e-92 341.7 221 70.1
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 6.1e-91 338.6 357 53.5
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 1.3e-88 330.9 223 71.7
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 1.1e-84 317.8 284 61.6
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 3.0e-82 309.7 369 48.8
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 6.7e-82 308.5 212 69.8
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 2.6e-81 306.6 261 63.2
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 4.1e-79 299.3 187 74.9
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 1.6e-78 297.4 338 48.5
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 4.5e-78 295.8 266 59.4
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 1.9e-76 290.4 298 54.0
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 3.1e-71 273.1 183 69.9
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 2.7e-70 270.0 312 47.8
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 5.9e-70 268.9 234 54.3
MD17G1118400 Malus domestica HOM05D006836 ORTHO05D008691 1.4e-66 257.7 264 55.3
MD07G1016400 Malus domestica HOM05D006836 ORTHO05D008691 3.0e-66 256.5 247 57.9
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 4.4e-65 252.7 229 53.3
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 9.8e-65 251.5 325 46.8
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 4.1e-63 246.1 235 52.3
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 5.4e-63 245.7 234 49.1
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 7.8e-46 188.7 238 43.7
FAN05G5431 Fragaria x ananassa HOM05D006836 ORTHO05D008691 2.4e-39 167.2 109 74.3
FAN09G0369 Fragaria x ananassa HOM05D006836 ORTHO05D008691 4.6e-38 162.9 109 73.4
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 1.3e-37 161.4 212 39.6
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 8.9e-34 148.7 201 42.3
HPP92_003031 Vanilla planifolia HOM05D006836 ORTHO05D008691 6.4e-32 142.5 97 67.0
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 2.7e-30 137.1 78 82.1
Haze_12595 Corylus avellana HOM05D006836 ORTHO05D008691 7.3e-20 102.4 50 98.0
Hma1.2p1_0599F.1_g187040 Hydrangea macrophylla HOM05D006836 ORTHO05D008691 2.8e-19 100.5 144 46.5
PRCOL_00003549 Prasinoderma coloniale HOM05D006836 ORTHO05D008691 1.5e-17 94.7 180 36.7
arahy.Tifrunner.gnm1.ann1.FY93PX Arachis hypogaea HOM05D006836 ORTHO05D000230 6.6e-13 79.3 45 75.6
Oeu037217.1 Olea europaea HOM05D006836 ORTHO05D049434 6.9e-10 69.3 150 44.0
Oeu037216.1 Olea europaea HOM05D006836 ORTHO05D049434 9.0e-10 68.9 150 44.0
MCO08G347 Micromonas commoda HOM05D006836 ORTHO05D008691 3.4e-09 67.0 235 29.4
Mapoly0098s0053 Marchantia polymorpha HOM05D001007 ORTHO05D008005 1.2e-06 58.5 141 31.2


User provided reference genes

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