Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014130 Carpinus fangiana HOM05D009126 ORTHO05D011285 1.9e-47 192.2 100 100.0
Cfa003654 Carpinus fangiana HOM05D009126 ORTHO05D011285 2.4e-13 79.0 44 95.5
CiPaw.07G134400 Carya illinoinensis HOM05D009126 ORTHO05D011285 7.6e-12 73.9 43 88.4
Thecc.08G064400 Theobroma cacao HOM05D009126 ORTHO05D011285 1.1e-10 70.1 44 79.5
Rhsim06G0003900 Rhododendron simsii HOM05D009126 ORTHO05D011285 3.2e-10 68.6 55 69.1
CSS0000199 Camellia sinensis var. sinensis HOM05D009126 ORTHO05D011285 4.2e-10 68.2 40 85.0
Hma1.2p1_0699F.1_g205690 Hydrangea macrophylla HOM05D009126 ORTHO05D011285 7.1e-10 67.4 41 82.9
Ciclev10003083m.g Citrus clementina HOM05D009126 ORTHO05D011285 1.2e-09 66.6 44 72.7
CiPaw.08G076800 Carya illinoinensis HOM05D009126 ORTHO05D011285 2.1e-09 65.9 43 79.1
ClCG11G018970 Citrullus lanatus HOM05D009126 ORTHO05D011285 3.5e-09 65.1 37 86.5
Manes.18G002601 Manihot esculenta HOM05D009126 ORTHO05D011285 1.3e-08 63.2 41 80.5
vmacro21775 Vaccinium macrocarpon HOM05D009126 ORTHO05D011285 1.3e-08 63.2 52 67.3
QL07p035122 Quercus lobata HOM05D009126 ORTHO05D011285 2.3e-08 62.4 39 79.5
Aa31sc158G30 Aethionema arabicum HOM05D009126 ORTHO05D011285 3.0e-08 62.0 42 78.6
CsaV3_4G037570 Cucumis sativus L. HOM05D009126 ORTHO05D011285 5.1e-08 61.2 43 67.4
Sed0014859 Sechium edule HOM05D009126 ORTHO05D011285 5.1e-08 61.2 37 78.4
Solyc01g088040.3 Solanum lycopersicum HOM05D009126 ORTHO05D011285 6.7e-08 60.8 39 71.8
Atru.chr13.74 Acer truncatum HOM05D009126 ORTHO05D011285 1.5e-07 59.7 40 75.0
Carub.0005s1498 Capsella rubella HOM05D009126 ORTHO05D011285 1.5e-07 59.7 43 67.4
Migut.N02982 Erythranthe guttata HOM05D009126 ORTHO05D011285 4.3e-07 58.2 43 62.8
Migut.O00885 Erythranthe guttata HOM05D009126 ORTHO05D011285 4.3e-07 58.2 43 62.8
Lj3g0009895 Lotus japonicus HOM05D009126 ORTHO05D011285 7.4e-07 57.4 44 65.9
SGA_v2.0_scaffold54G19626 Striga asiatica HOM05D009126 ORTHO05D011285 1.6e-06 56.2 38 73.7
Gohir.A01G102266 Gossypium hirsutum HOM05D009126 ORTHO05D011285 2.1e-06 55.8 44 56.8
Gohir.D01G087401 Gossypium hirsutum HOM05D009126 ORTHO05D011285 2.1e-06 55.8 44 56.8
COL.COLO4_07461 Corchorus olitorius HOM05D009126 ORTHO05D011285 2.8e-06 55.5 37 75.7
Oeu035754.1 Olea europaea HOM05D009126 ORTHO05D011285 6.2e-06 54.3 39 66.7


User provided reference genes

Program Settings