Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014129 Carpinus fangiana HOM05D005680 ORTHO05D006334 4.4e-33 144.1 73 100.0
Haze_22851 Corylus avellana HOM05D005680 ORTHO05D006334 2.3e-26 121.7 76 86.8
QL02p015306 Quercus lobata HOM05D005680 ORTHO05D006334 1.0e-13 79.7 73 61.6
Atru.chr13.75 Acer truncatum HOM05D005680 ORTHO05D006334 6.6e-13 77.0 64 60.9
TAR376G0914 Trochodendron aralioides HOM05D005680 ORTHO05D006334 1.1e-12 76.3 64 62.5
TAR628G1700 Trochodendron aralioides HOM05D005680 ORTHO05D006334 5.6e-12 73.9 74 58.1
Sabra02G0004200 Salix brachista HOM05D005680 ORTHO05D006334 2.8e-11 71.6 66 56.1
Potri.002G006000 Populus trichocarpa HOM05D005680 ORTHO05D006334 4.7e-11 70.9 66 56.1
SHI12592 Sapria himalayana HOM05D005680 ORTHO05D006334 4.7e-11 70.9 64 54.7
CsaV3_4G037560 Cucumis sativus L. HOM05D005680 ORTHO05D006334 1.8e-10 68.9 58 65.5
Nn1g04629 Nelumbo nucifera HOM05D005680 ORTHO05D006334 2.3e-10 68.6 72 54.2
MELO3C017050.2 Cucumis melo HOM05D005680 ORTHO05D006334 3.1e-10 68.2 57 66.7
Aqoxy507s001 Aquilegia oxysepala HOM05D005680 ORTHO05D006334 2.6e-09 65.1 63 55.6
Aqoxy5G00968 Aquilegia oxysepala HOM05D005680 ORTHO05D006334 2.6e-09 65.1 63 55.6
ClCG11G018960 Citrullus lanatus HOM05D005680 ORTHO05D006334 2.6e-09 65.1 59 61.0
Ca_13933_v3 Cicer arietinum L. HOM05D005680 ORTHO05D006334 3.4e-09 64.7 72 47.2
Gohir.A11G217600 Gossypium hirsutum HOM05D005680 ORTHO05D006334 4.4e-09 64.3 69 49.3
CsaV3_6G043830 Cucumis sativus L. HOM05D005680 ORTHO05D006334 5.8e-09 63.9 71 50.7
Gohir.D11G205900 Gossypium hirsutum HOM05D005680 ORTHO05D006334 7.5e-09 63.5 72 48.6
Gorai.007G221000 Gossypium raimondii HOM05D005680 ORTHO05D006334 7.5e-09 63.5 72 48.6
PGR031G2681 Punica granatum HOM05D005680 ORTHO05D006334 1.3e-08 62.8 57 54.4
Sed0000508 Sechium edule HOM05D005680 ORTHO05D006334 1.3e-08 62.8 60 55.0
PSO063G6705 Papaver somniferum HOM05D005680 ORTHO05D006334 1.7e-08 62.4 66 50.0
Potri.005G145200 Populus trichocarpa HOM05D005680 ORTHO05D006334 2.2e-08 62.0 69 50.7
Thecc.01G068000 Theobroma cacao HOM05D005680 ORTHO05D006334 2.2e-08 62.0 66 51.5
arahy.Tifrunner.gnm1.ann1.C6RKPL Arachis hypogaea HOM05D005680 ORTHO05D006334 3.7e-08 61.2 65 49.2
Glyma.05G103100 Glycine max HOM05D005680 ORTHO05D006334 3.7e-08 61.2 67 47.8
Manes.12G112300 Manihot esculenta HOM05D005680 ORTHO05D006334 3.7e-08 61.2 73 46.6
Medtr4g095330 Medicago truncatula HOM05D005680 ORTHO05D006334 4.9e-08 60.8 80 43.8
CDE04G1110 Ceratophyllum demersum HOM05D005680 ORTHO05D006334 6.4e-08 60.5 69 49.3
MELO3C007608.2 Cucumis melo HOM05D005680 ORTHO05D006334 6.4e-08 60.5 58 58.6
TWI09G1440 Tripterygium wilfordii HOM05D005680 ORTHO05D006334 6.4e-08 60.5 74 45.9
Aqoxy7G01353 Aquilegia oxysepala HOM05D005680 ORTHO05D006334 8.3e-08 60.1 59 50.8
Haze_15319 Corylus avellana HOM05D005680 ORTHO05D006334 8.3e-08 60.1 63 47.6
COL.COLO4_17729 Corchorus olitorius HOM05D005680 ORTHO05D006334 1.1e-07 59.7 61 52.5
Nn1g04362 Nelumbo nucifera HOM05D005680 ORTHO05D006334 1.1e-07 59.7 65 52.3
Rhsim10G0104100 Rhododendron simsii HOM05D003166 ORTHO05D003605 1.1e-07 59.7 57 54.4
Sabra05G0114900 Salix brachista HOM05D005680 ORTHO05D006334 1.1e-07 59.7 64 46.9
Thecc.02G019100 Theobroma cacao HOM05D005680 ORTHO05D006334 1.1e-07 59.7 68 48.5
Duzib147G0030 Durio zibethinus HOM05D005680 ORTHO05D006334 1.4e-07 59.3 66 48.5
AL4G29360 Arabidopsis lyrata HOM05D005680 ORTHO05D006334 1.9e-07 58.9 55 52.7
Cpa.g.sc88.61 Carica papaya HOM05D005680 ORTHO05D006334 1.9e-07 58.9 67 49.3
TPR.G23854 Trifolium pratense HOM05D005680 ORTHO05D006334 1.9e-07 58.9 79 43.0
Carub.0004s1530 Capsella rubella HOM05D005680 ORTHO05D006334 2.4e-07 58.5 55 50.9
ClCG01G017300 Citrullus lanatus HOM05D005680 ORTHO05D006334 2.4e-07 58.5 67 49.3
Ciclev10026786m.g Citrus clementina HOM05D005680 ORTHO05D006334 2.4e-07 58.5 67 46.3
CARHR127690 Cardamine hirsuta HOM05D005680 ORTHO05D006334 4.1e-07 57.8 55 50.9
Duzib052G1168 Durio zibethinus HOM05D005680 ORTHO05D006334 4.1e-07 57.8 63 52.4
TAR625G0576 Trochodendron aralioides HOM05D005680 ORTHO05D006334 4.1e-07 57.8 61 49.2
Ah.03g146390 Amaranthus hybridus HOM05D005680 ORTHO05D006334 5.4e-07 57.4 56 51.8
Phvul.003G237400 Phaseolus vulgaris HOM05D005680 ORTHO05D006334 5.4e-07 57.4 70 44.3
BcaB06g28712 Brassica carinata HOM05D005680 ORTHO05D006334 7.0e-07 57.0 49 55.1
A04p25910 Brassica napus HOM05D005680 ORTHO05D006334 7.0e-07 57.0 49 55.1
BraA04t18094Z Brassica rapa HOM05D005680 ORTHO05D006334 7.0e-07 57.0 49 55.1
Psat7g075160 Pisum sativum HOM05D005680 ORTHO05D006334 7.0e-07 57.0 79 40.5
Sabra05G0116000 Salix brachista HOM05D005680 ORTHO05D006334 7.0e-07 57.0 64 45.3
BcaC01g05829 Brassica carinata HOM05D005680 ORTHO05D006334 9.2e-07 56.6 54 51.9
C03p22000 Brassica napus HOM05D005680 ORTHO05D006334 9.2e-07 56.6 54 51.9
Medtr8g081540 Medicago truncatula HOM05D005680 ORTHO05D006334 9.2e-07 56.6 75 42.7
BcaB01g03924 Brassica carinata HOM05D005680 ORTHO05D006334 1.2e-06 56.2 54 51.9
Thhalv10017732m.g Eutrema salsugineum HOM05D005680 ORTHO05D006334 1.2e-06 56.2 54 50.0
Glyma.17G164200 Glycine max HOM05D005680 ORTHO05D006334 1.2e-06 56.2 68 47.1
HPP92_012496 Vanilla planifolia HOM05D005680 ORTHO05D006334 1.2e-06 56.2 70 51.4
Lj2g0023086 Lotus japonicus HOM05D005680 ORTHO05D006334 1.6e-06 55.8 70 45.7
Sp4g16030 Schrenkiella parvula HOM05D005680 ORTHO05D006334 1.6e-06 55.8 54 50.0
THA.LOC104806914 Tarenaya hassleriana HOM05D005680 ORTHO05D006334 1.6e-06 55.8 57 54.4
arahy.Tifrunner.gnm1.ann1.Y5V9TA Arachis hypogaea HOM05D005680 ORTHO05D006334 2.0e-06 55.5 65 47.7
Aa31LG9G13590 Aethionema arabicum HOM05D005680 ORTHO05D006334 2.7e-06 55.1 52 51.9
EL10Ac6g15662 Beta vulgaris HOM05D005680 ORTHO05D006334 2.7e-06 55.1 56 48.2
Eucgr.H02278 Eucalyptus grandis HOM05D005680 ORTHO05D006334 2.7e-06 55.1 63 41.3
Lj4g0022522 Lotus japonicus HOM05D005680 ORTHO05D006334 2.7e-06 55.1 68 42.6
Lalb_Chr05g0226041 Lupinus albus HOM05D005680 ORTHO05D006334 2.7e-06 55.1 67 43.3
Lalb_Chr23g0265551 Lupinus albus HOM05D005680 ORTHO05D006334 2.7e-06 55.1 57 56.1
Dinv38141 Davidia involucrata HOM05D000032 ORTHO05D004656 3.5e-06 54.7 68 50.0
PGR102G2721 Punica granatum HOM05D005680 ORTHO05D006334 3.5e-06 54.7 51 54.9
Cpa.g.sc6.54 Carica papaya HOM05D005680 ORTHO05D006334 4.6e-06 54.3 69 50.7
Oeu013277.1 Olea europaea HOM05D005680 ORTHO05D006334 6.0e-06 53.9 62 46.8


User provided reference genes

Program Settings