Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014061 Carpinus fangiana HOM05D008020 ORTHO05D010140 1.2e-32 142.5 68 100.0
Haze_22756 Corylus avellana HOM05D008020 ORTHO05D010140 1.4e-30 135.6 68 97.1
Glyma.06G019000 Glycine max HOM05D008020 ORTHO05D010140 3.8e-23 110.9 69 78.3
Rhsim06G0008300 Rhododendron simsii HOM05D008020 ORTHO05D010140 1.1e-22 109.4 68 75.0
Actinidia29785 Actinidia chinensis HOM05D008020 ORTHO05D010140 1.5e-22 109.0 67 76.1
Nn6g31749 Nelumbo nucifera HOM05D008020 ORTHO05D010140 1.5e-22 109.0 67 74.6
Glyma.04G018700 Glycine max HOM05D008020 ORTHO05D010140 3.2e-22 107.8 69 76.8
Gorai.002G118600 Gossypium raimondii HOM05D008020 ORTHO05D010140 7.2e-22 106.7 68 76.5
Medtr3g115170 Medicago truncatula HOM05D008020 ORTHO05D010140 7.2e-22 106.7 69 78.3
TAR625G0930 Trochodendron aralioides HOM05D008020 ORTHO05D010140 1.6e-21 105.5 68 73.5
Gohir.D01G093200 Gossypium hirsutum HOM05D008020 ORTHO05D010140 2.1e-21 105.1 68 75.0
VMungo1309G2936 Vigna mungo HOM05D008020 ORTHO05D010140 2.7e-21 104.8 68 76.5
Oeu056212.1 Olea europaea HOM05D008020 ORTHO05D010140 4.7e-21 104.0 69 76.8
COL.COLO4_00185 Corchorus olitorius HOM05D008020 ORTHO05D010140 1.0e-20 102.8 72 75.0
COL.COLO4_03997 Corchorus olitorius HOM05D008020 ORTHO05D010140 1.0e-20 102.8 72 75.0
Gohir.A01G106700 Gossypium hirsutum HOM05D008020 ORTHO05D010140 1.4e-20 102.4 68 73.5
ClCG11G018630 Citrullus lanatus HOM05D008020 ORTHO05D010140 2.3e-20 101.7 68 73.5
MD15G1003000 Malus domestica HOM05D008020 ORTHO05D010140 3.0e-20 101.3 70 74.3
TWI56G1414 Tripterygium wilfordii HOM05D008020 ORTHO05D010140 5.2e-20 100.5 68 69.1
Migut.C00948 Erythranthe guttata HOM05D008020 ORTHO05D010140 6.8e-20 100.1 69 73.9
Migut.C00952 Erythranthe guttata HOM05D008020 ORTHO05D010140 6.8e-20 100.1 69 73.9
Thecc.08G057500 Theobroma cacao HOM05D008020 ORTHO05D010140 8.8e-20 99.8 69 76.8
Manes.05G135100 Manihot esculenta HOM05D008020 ORTHO05D010140 1.5e-19 99.0 69 71.0
Lj1g0023017 Lotus japonicus HOM05D008020 ORTHO05D010140 2.6e-19 98.2 69 72.5
Phvul.009G021900 Phaseolus vulgaris HOM05D008020 ORTHO05D010140 2.6e-19 98.2 69 72.5
Duzib041G0109 Durio zibethinus HOM05D008020 ORTHO05D010140 1.3e-18 95.9 68 70.6
CDE05G0785 Ceratophyllum demersum HOM05D008020 ORTHO05D010140 4.8e-18 94.0 68 67.6
Lsat_1_v5_gn_9_44980 Lactuca sativa HOM05D008020 ORTHO05D010140 4.8e-18 94.0 70 68.6
Cpa.g.sc26.209 Carica papaya HOM05D008020 ORTHO05D010140 8.3e-18 93.2 69 72.5
Eucgr.F03547 Eucalyptus grandis HOM05D008020 ORTHO05D010140 8.3e-18 93.2 71 66.2
SalBow7G2452 Salvia bowleyana HOM05D008020 ORTHO05D010140 8.3e-18 93.2 68 67.6
unitig_0.g2104 Utricularia gibba HOM05D008020 ORTHO05D010140 1.1e-17 92.8 68 67.6
HanXRQChr15g0492771 Helianthus annuus HOM05D008020 ORTHO05D010140 1.4e-17 92.4 71 69.0
Os03g0133100 Oryza sativa ssp. japonica HOM05D008020 ORTHO05D010140 3.1e-17 91.3 68 66.2
PSO210G7351 Papaver somniferum HOM05D008020 ORTHO05D010140 4.1e-17 90.9 70 68.6
Psat5g011800 Pisum sativum HOM05D008020 ORTHO05D010140 4.1e-17 90.9 70 70.0
EL10Ac1g01981 Beta vulgaris HOM05D008020 ORTHO05D010140 5.3e-17 90.5 68 69.1
Ca_15441_v3 Cicer arietinum L. HOM05D008020 ORTHO05D010140 7.0e-17 90.1 70 71.4
MELO3C017014.2 Cucumis melo HOM05D008020 ORTHO05D010140 2.0e-16 88.6 70 67.1
ECA232G3495 Erigeron canadensis HOM05D008020 ORTHO05D010140 3.5e-16 87.8 74 66.2
CSS0004036 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 5.9e-16 87.0 67 62.7
SEGI_30631 Sequoiadendron giganteum HOM05D008020 ORTHO05D010140 1.3e-15 85.9 74 62.2
BolC3t15181H Brassica oleracea HOM05D008020 ORTHO05D010140 1.7e-15 85.5 85 56.5
Zm00001eb402590 Zea mays HOM05D008020 ORTHO05D010140 2.9e-15 84.7 72 62.5
BcaC01g05309 Brassica carinata HOM05D008020 ORTHO05D010140 5.0e-15 84.0 85 56.5
Sc26g0004630 Simmondsia chinensis HOM05D008020 ORTHO05D010140 5.0e-15 84.0 69 66.7
ATR0106G002 Amborella trichopoda HOM05D008020 ORTHO05D010140 8.5e-15 83.2 72 59.7
CARHR284890 Cardamine hirsuta HOM05D008020 ORTHO05D010140 1.1e-14 82.8 84 58.3
Lalb_Chr11g0061691 Lupinus albus HOM05D008020 ORTHO05D010140 1.1e-14 82.8 71 67.6
C03p28110 Brassica napus HOM05D008020 ORTHO05D010140 1.9e-14 82.0 85 55.3
Carub.0008s0691 Capsella rubella HOM05D008020 ORTHO05D010140 2.5e-14 81.6 76 61.8
BcaB01g03440 Brassica carinata HOM05D008020 ORTHO05D010140 3.2e-14 81.3 85 55.3
Ah.00g000390 Amaranthus hybridus HOM05D008020 ORTHO05D010140 4.2e-14 80.9 68 64.7
Sp7g08310 Schrenkiella parvula HOM05D008020 ORTHO05D010140 4.2e-14 80.9 85 60.0
arahy.Tifrunner.gnm1.ann1.IQ4KFY Arachis hypogaea HOM05D008020 ORTHO05D010140 9.4e-14 79.7 74 60.8
CsaV3_4G037160 Cucumis sativus L. HOM05D008020 ORTHO05D010140 1.4e-12 75.9 69 62.3
RcHm_v2.0_Chr6g0304161 Rosa chinensis HOM05D008020 ORTHO05D010140 1.4e-12 75.9 74 55.4
AT5G42290 Arabidopsis thaliana HOM05D008020 ORTHO05D010140 2.3e-12 75.1 83 51.8
QL02p013929 Quercus lobata HOM05D008020 ORTHO05D010140 2.3e-12 75.1 51 76.5
FAN15G1770 Fragaria x ananassa HOM05D008020 ORTHO05D010140 4.0e-12 74.3 81 49.4
AUR62036888 Chenopodium quinoa HOM05D008020 ORTHO05D010140 6.8e-12 73.6 69 62.3
AUR62043558 Chenopodium quinoa HOM05D008020 ORTHO05D010140 6.8e-12 73.6 69 62.3
Atru.chr13.153 Acer truncatum HOM05D008020 ORTHO05D010140 1.2e-11 72.8 57 68.4
AL8G19330 Arabidopsis lyrata HOM05D008020 ORTHO05D010140 2.0e-11 72.0 83 51.8
Thhalv10009649m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 2.0e-11 72.0 85 52.9
FvH4_2g37570 Fragaria vesca HOM05D008020 ORTHO05D010140 4.4e-11 70.9 82 47.6
Thhalv10028031m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 9.8e-11 69.7 85 51.8
CSS0008844 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 7.0e-09 63.5 67 52.2
AagrBONN_evm.TU.Sc2ySwM_368.1603 Anthoceros agrestis HOM05D008020 ORTHO05D010140 1.0e-07 59.7 74 52.7
Aa31LG9G12400 Aethionema arabicum HOM05D008020 ORTHO05D010140 8.6e-07 56.6 71 50.7
Ciclev10003459m.g Citrus clementina HOM05D008020 ORTHO05D010140 8.6e-07 56.6 49 67.3
Pp3c20_23510 Physcomitrium patens HOM05D008020 ORTHO05D010140 1.9e-06 55.5 69 49.3


User provided reference genes

Program Settings