Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013923 Carpinus fangiana HOM05D005344 ORTHO05D006444 1.6e-106 389.4 192 100.0
Duzib093G0333 Durio zibethinus HOM05D005344 ORTHO05D006444 2.9e-60 235.7 128 92.2
CiPaw.08G064300 Carya illinoinensis HOM05D005344 ORTHO05D006444 1.1e-59 233.8 128 91.4
Thecc.08G040900 Theobroma cacao HOM05D005344 ORTHO05D006444 1.9e-59 233.0 128 91.4
Gohir.D05G218100 Gossypium hirsutum HOM05D005344 ORTHO05D006444 1.6e-58 229.9 128 89.1
Gohir.A05G214800 Gossypium hirsutum HOM05D005344 ORTHO05D006444 2.7e-58 229.2 128 89.1
PGR083G0019 Punica granatum HOM05D005344 ORTHO05D006444 3.6e-58 228.8 128 89.8
QL02p011006 Quercus lobata HOM05D005344 ORTHO05D006444 1.0e-57 227.3 127 89.0
GSVIVG01009861001 Vitis vinifera HOM05D005344 ORTHO05D006444 2.3e-57 226.1 128 88.3
Haze_22604 Corylus avellana HOM05D005344 ORTHO05D006444 3.0e-57 225.7 118 94.9
CSS0034614 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 3.9e-57 225.3 128 88.3
Dinv39499 Davidia involucrata HOM05D005344 ORTHO05D006444 3.9e-57 225.3 128 88.3
QL03p018250 Quercus lobata HOM05D005344 ORTHO05D006444 8.8e-57 224.2 127 87.4
Nn6g32300 Nelumbo nucifera HOM05D005344 ORTHO05D006444 1.1e-56 223.8 128 87.5
PGR102G3231 Punica granatum HOM05D005344 ORTHO05D006444 1.5e-56 223.4 126 88.1
Potri.004G228566 Populus trichocarpa HOM05D005344 ORTHO05D006444 3.3e-56 222.2 128 86.7
Cc10_g01930 Coffea canephora HOM05D005344 ORTHO05D006444 4.3e-56 221.9 128 86.7
Manes.18G015800 Manihot esculenta HOM05D005344 ORTHO05D006444 4.3e-56 221.9 128 86.7
Prupe.1G182400 Prunus persica HOM05D005344 ORTHO05D006444 9.7e-56 220.7 128 86.7
CANSAT56G2098 Cannabis sativa HOM05D005344 ORTHO05D006444 1.3e-55 220.3 128 85.9
TWI75G1031 Tripterygium wilfordii HOM05D005344 ORTHO05D006444 1.3e-55 220.3 128 85.9
Sed0018322 Sechium edule HOM05D005344 ORTHO05D006444 1.7e-55 219.9 126 84.9
Cpa.g.sc116.53 Carica papaya HOM05D005344 ORTHO05D006444 2.2e-55 219.5 126 86.5
Prupe.1G368800 Prunus persica HOM05D005344 ORTHO05D006444 2.2e-55 219.5 128 85.9
TAR381G0484 Trochodendron aralioides HOM05D005344 ORTHO05D006444 2.8e-55 219.2 128 85.2
FAN15G2308 Fragaria x ananassa HOM05D005344 ORTHO05D006444 3.7e-55 218.8 128 85.2
RcHm_v2.0_Chr6g0302491 Rosa chinensis HOM05D005344 ORTHO05D006444 3.7e-55 218.8 128 85.2
CANSAT56G2754 Cannabis sativa HOM05D005344 ORTHO05D006444 4.8e-55 218.4 128 85.2
TWI31G0971 Tripterygium wilfordii HOM05D005344 ORTHO05D006444 4.8e-55 218.4 128 85.2
Atru.chr12.1135 Acer truncatum HOM05D005344 ORTHO05D006444 6.3e-55 218.0 126 84.1
arahy.Tifrunner.gnm1.ann1.Y8FRL8 Arachis hypogaea HOM05D005344 ORTHO05D006444 6.3e-55 218.0 128 82.0
MD02G1241500 Malus domestica HOM05D005344 ORTHO05D006444 1.4e-54 216.9 128 83.6
FvH4_2g38800 Fragaria vesca HOM05D005344 ORTHO05D006444 1.8e-54 216.5 128 84.4
MD07G1075400 Malus domestica HOM05D005344 ORTHO05D006444 3.1e-54 215.7 128 83.6
CSS0046173 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 9.1e-54 214.2 119 88.2
Gorai.009G225000 Gossypium raimondii HOM05D005344 ORTHO05D006444 9.1e-54 214.2 118 88.1
ECA236G2959 Erigeron canadensis HOM05D005344 ORTHO05D006444 2.0e-53 213.0 128 81.2
Eucgr.F01631 Eucalyptus grandis HOM05D005344 ORTHO05D006444 2.0e-53 213.0 123 85.4
HanXRQChr04g0119171 Helianthus annuus HOM05D005344 ORTHO05D006444 2.0e-53 213.0 136 78.7
HanXRQChr15g0480961 Helianthus annuus HOM05D005344 ORTHO05D006444 2.0e-53 213.0 128 83.6
Lsat_1_v5_gn_7_29421 Lactuca sativa HOM05D005344 ORTHO05D006444 2.0e-53 213.0 128 82.8
COL.COLO4_32025 Corchorus olitorius HOM05D005344 ORTHO05D006444 2.6e-53 212.6 118 88.1
CsaV3_3G045650 Cucumis sativus L. HOM05D005344 ORTHO05D006444 7.7e-53 211.1 126 82.5
CSS0046670 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 1.0e-52 210.7 120 85.0
Actinidia15404 Actinidia chinensis HOM05D005344 ORTHO05D006444 1.3e-52 210.3 122 82.8
Nitab4.5_0001988g0010 Nicotiana tabacum HOM05D005344 ORTHO05D006444 1.3e-52 210.3 128 82.0
PSO541G4852 Papaver somniferum HOM05D005344 ORTHO05D006444 1.3e-52 210.3 128 81.2
PSO675G5369 Papaver somniferum HOM05D005344 ORTHO05D006444 1.3e-52 210.3 128 81.2
Peaxi162Scf00287g01714 Petunia axillaris HOM05D005344 ORTHO05D006444 1.3e-52 210.3 128 81.2
Psat5g014400 Pisum sativum HOM05D005344 ORTHO05D006444 1.3e-52 210.3 128 81.2
Lj1g0020845 Lotus japonicus HOM05D005344 ORTHO05D006444 2.9e-52 209.1 128 80.5
Medtr3g113260 Medicago truncatula HOM05D005344 ORTHO05D006444 2.9e-52 209.1 128 79.7
Sabra01G0173600 Salix brachista HOM05D005344 ORTHO05D006444 2.9e-52 209.1 119 85.7
Solyc04g081220.3 Solanum lycopersicum HOM05D005344 ORTHO05D006444 2.9e-52 209.1 128 80.5
Sopen04g034830 Solanum pennellii HOM05D005344 ORTHO05D006444 2.9e-52 209.1 128 80.5
Medtr1g013440 Medicago truncatula HOM05D005344 ORTHO05D006444 3.8e-52 208.8 128 80.5
PGSC0003DMG400003723 Solanum tuberosum HOM05D005344 ORTHO05D006444 5.0e-52 208.4 128 80.5
SGA_v2.0_scaffold47G17494 Striga asiatica HOM05D005344 ORTHO05D006444 6.5e-52 208.0 128 80.5
Lalb_Chr11g0061991 Lupinus albus HOM05D005344 ORTHO05D006444 8.5e-52 207.6 128 81.2
Potri.012G106900 Populus trichocarpa HOM05D005344 ORTHO05D006444 8.5e-52 207.6 118 86.4
TPR.G38895 Trifolium pratense HOM05D005344 ORTHO05D006444 1.9e-51 206.5 128 79.7
ClCG05G018520 Citrullus lanatus HOM05D005344 ORTHO05D006444 2.5e-51 206.1 118 84.7
Rhsim07G0245900 Rhododendron simsii HOM05D005344 ORTHO05D006444 2.5e-51 206.1 118 83.9
CDE05G1229 Ceratophyllum demersum HOM05D005344 ORTHO05D006444 3.2e-51 205.7 128 78.1
Migut.N03145 Erythranthe guttata HOM05D005344 ORTHO05D006444 3.2e-51 205.7 128 78.9
Glyma.06G025600 Glycine max HOM05D005344 ORTHO05D006444 5.5e-51 204.9 128 79.7
Sc02g0008440 Simmondsia chinensis HOM05D005344 ORTHO05D006444 5.5e-51 204.9 128 76.6
MSTRG.24255 Avicennia marina HOM05D005344 ORTHO05D006444 7.2e-51 204.5 128 80.5
BcaB06g27347 Brassica carinata HOM05D005344 ORTHO05D006444 7.2e-51 204.5 128 78.1
BolC4t26183H Brassica oleracea HOM05D005344 ORTHO05D006444 7.2e-51 204.5 128 78.1
BraA04t16898Z Brassica rapa HOM05D005344 ORTHO05D006444 7.2e-51 204.5 128 78.1
Phvul.009G015400 Phaseolus vulgaris HOM05D005344 ORTHO05D006444 7.2e-51 204.5 128 80.5
Nitab4.5_0006992g0020 Nicotiana tabacum HOM05D005344 ORTHO05D006444 1.2e-50 203.8 128 78.9
vmacro04337 Vaccinium macrocarpon HOM05D005344 ORTHO05D006444 1.2e-50 203.8 118 83.1
FAN20G2570 Fragaria x ananassa HOM05D005344 ORTHO05D006444 1.6e-50 203.4 118 83.9
TPR.G5807 Trifolium pratense HOM05D005344 ORTHO05D006444 1.6e-50 203.4 129 79.1
Aa31LG9G16480 Aethionema arabicum HOM05D005344 ORTHO05D006444 2.1e-50 203.0 126 77.8
Thhalv10027992m.g Eutrema salsugineum HOM05D005344 ORTHO05D006444 2.1e-50 203.0 126 78.6
Sp7g02390 Schrenkiella parvula HOM05D005344 ORTHO05D006444 2.7e-50 202.6 126 77.0
Oeu024518.1 Olea europaea HOM05D005344 ORTHO05D006444 3.6e-50 202.2 118 83.1
AT5G39600 Arabidopsis thaliana HOM05D005344 ORTHO05D006444 4.7e-50 201.8 126 78.6
Ciclev10002838m.g Citrus clementina HOM05D005344 ORTHO05D006444 7.9e-50 201.1 126 79.4
DCAR_013854 Daucus carota HOM05D005344 ORTHO05D006444 7.9e-50 201.1 118 82.2
TAR625G0974 Trochodendron aralioides HOM05D005344 ORTHO05D006444 7.9e-50 201.1 128 76.6
Oeu031192.1 Olea europaea HOM05D005344 ORTHO05D006444 1.0e-49 200.7 118 82.2
arahy.Tifrunner.gnm1.ann1.0YI8WX Arachis hypogaea HOM05D005344 ORTHO05D006444 1.4e-49 200.3 118 79.7
Carub.0007s3634 Capsella rubella HOM05D005344 ORTHO05D006444 1.8e-49 199.9 126 77.0
CARHR262690 Cardamine hirsuta HOM05D005344 ORTHO05D006444 6.7e-49 198.0 126 77.8
arahy.Tifrunner.gnm1.ann1.2J2T1L Arachis hypogaea HOM05D005344 ORTHO05D006444 8.8e-49 197.6 121 77.7
AL7G50710 Arabidopsis lyrata HOM05D005344 ORTHO05D006444 2.6e-48 196.1 126 76.2
Glyma.04G025800 Glycine max HOM05D005344 ORTHO05D006444 2.6e-48 196.1 128 76.6
CDE05G1331 Ceratophyllum demersum HOM05D005344 ORTHO05D006444 3.3e-48 195.7 118 78.8
CAN.G1271.12 Capsicum annuum HOM05D005344 ORTHO05D006444 4.4e-48 195.3 118 80.5
MELO3C003771.2 Cucumis melo HOM05D005344 ORTHO05D006444 7.4e-48 194.5 118 81.4
SalBow8G2912 Salvia bowleyana HOM05D005344 ORTHO05D006444 1.7e-47 193.4 118 78.8
Aqoxy6G02944 Aquilegia oxysepala HOM05D005344 ORTHO05D006444 2.2e-47 193.0 118 80.5
Ca_16814_v3 Cicer arietinum L. HOM05D005344 ORTHO05D006444 2.2e-47 193.0 118 78.8
arahy.Tifrunner.gnm1.ann1.NGB00B Arachis hypogaea HOM05D005344 ORTHO05D006444 2.8e-47 192.6 118 78.0
A04p12340 Brassica napus HOM05D005344 ORTHO05D006444 1.1e-46 190.7 120 76.7
C04p46010 Brassica napus HOM05D005344 ORTHO05D006444 1.1e-46 190.7 120 76.7
FvH4_1g25620 Fragaria vesca HOM05D005344 ORTHO05D006444 1.1e-46 190.7 126 76.2
Aqoxy6G02319 Aquilegia oxysepala HOM05D005344 ORTHO05D006444 1.4e-46 190.3 128 74.2
Nitab4.5_0005425g0020 Nicotiana tabacum HOM05D005344 ORTHO05D006444 4.1e-46 188.7 118 77.1
VMungo1309G2030 Vigna mungo HOM05D005344 ORTHO05D006444 4.1e-46 188.7 121 77.7
EL10Ac1g02258 Beta vulgaris HOM05D005344 ORTHO05D006444 1.5e-45 186.8 127 70.1
TAR625G1223 Trochodendron aralioides HOM05D005344 ORTHO05D006444 1.5e-45 186.8 114 78.1
FAN23G0736 Fragaria x ananassa HOM05D005344 ORTHO05D006444 5.9e-45 184.9 130 75.4
HPP92_014936 Vanilla planifolia HOM05D005344 ORTHO05D006444 1.3e-44 183.7 127 74.0
unitig_899.g15276 Utricularia gibba HOM05D005344 ORTHO05D006444 2.2e-44 183.0 147 66.0
MBI05_g26505_MAGBIO Magnolia biondii HOM05D005344 ORTHO05D006444 2.9e-44 182.6 107 86.0
AUR62035723 Chenopodium quinoa HOM05D005344 ORTHO05D006444 6.5e-44 181.4 145 63.4
FAN26G0652 Fragaria x ananassa HOM05D005344 ORTHO05D006444 1.9e-43 179.9 121 73.6
arahy.Tifrunner.gnm1.ann1.3U1GZ3 Arachis hypogaea HOM05D005344 ORTHO05D006444 2.5e-43 179.5 107 81.3
SHI08085 Sapria himalayana HOM05D005344 ORTHO05D006444 5.5e-43 178.3 118 74.6
AUR62035436 Chenopodium quinoa HOM05D005344 ORTHO05D006444 9.4e-43 177.6 118 70.3
arahy.Tifrunner.gnm1.ann1.IGJ8TG Arachis hypogaea HOM05D005344 ORTHO05D006444 2.1e-42 176.4 105 81.9
FAN19G0275 Fragaria x ananassa HOM05D005344 ORTHO05D006444 6.1e-42 174.9 120 73.3
Manes.09G054100 Manihot esculenta HOM05D005344 ORTHO05D006444 1.0e-41 174.1 118 72.0
ATR0665G498 Amborella trichopoda HOM05D005344 ORTHO05D006444 1.3e-39 167.2 128 68.0
arahy.Tifrunner.gnm1.ann1.Y1NSFR Arachis hypogaea HOM05D005344 ORTHO05D006444 5.3e-38 161.8 96 82.3
Atru.chr4.1572 Acer truncatum HOM05D005344 ORTHO05D006444 7.0e-38 161.4 132 65.9
arahy.Tifrunner.gnm1.ann1.2QY3VR Arachis hypogaea HOM05D005344 ORTHO05D006444 1.6e-37 160.2 109 75.2
arahy.Tifrunner.gnm1.ann1.ZTTZ43 Arachis hypogaea HOM05D005344 ORTHO05D006444 2.6e-37 159.5 96 81.2
arahy.Tifrunner.gnm1.ann1.H9RICG Arachis hypogaea HOM05D005344 ORTHO05D006444 4.5e-37 158.7 95 81.1
Gorai.005G111500 Gossypium raimondii HOM05D005344 ORTHO05D006444 7.2e-35 151.4 100 76.0
MSTRG.22330 Avicennia marina HOM05D005344 ORTHO05D006444 1.0e-33 147.5 97 75.3
Pp3c9_11020 Physcomitrium patens HOM05D005344 ORTHO05D006444 5.7e-32 141.7 128 57.8
MBI07_g11722_MAGBIO Magnolia biondii HOM05D005344 ORTHO05D006444 2.8e-31 139.4 85 82.4
Os02g0282100 Oryza sativa ssp. japonica HOM05D005344 ORTHO05D006444 8.2e-31 137.9 142 52.1
Mapoly0151s0020 Marchantia polymorpha HOM05D005344 ORTHO05D006444 1.8e-30 136.7 110 57.3
Zm00001eb237200 Zea mays HOM05D005344 ORTHO05D006444 8.5e-28 127.9 140 48.6
AagrBONN_evm.TU.Sc2ySwM_117.1156 Anthoceros agrestis HOM05D005344 ORTHO05D006444 1.5e-27 127.1 95 61.1
Hund00462 Selenicereus undatus HOM05D005344 ORTHO05D006444 1.9e-27 126.7 112 56.2
ATR0605G109 Amborella trichopoda HOM05D005344 ORTHO05D006444 1.6e-26 123.6 91 69.2
arahy.Tifrunner.gnm1.ann1.3DP3ZG Arachis hypogaea HOM05D005344 ORTHO05D006444 3.5e-13 79.3 50 76.0
CSS0040415 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 2.1e-10 70.1 39 79.5
CSS0035037 Camellia sinensis var. sinensis HOM05D005344 ORTHO05D006444 1.5e-08 63.9 39 79.5
CBR_g48744 Chara braunii HOM05D005344 ORTHO05D006444 1.4e-06 57.4 66 40.9
Nn5g29273 Nelumbo nucifera HOM05D005344 ORTHO05D006444 1.4e-06 57.4 32 81.2


User provided reference genes

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