Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013823 Carpinus fangiana HOM05D006739 ORTHO05D008402 1.6e-104 384.4 255 100.0
Haze_22495 Corylus avellana HOM05D006739 ORTHO05D008402 1.5e-97 361.3 255 95.7
CiPaw.08G057600 Carya illinoinensis HOM05D006739 ORTHO05D008402 8.2e-64 249.2 265 75.5
QL12p039876 Quercus lobata HOM05D006739 ORTHO05D008402 4.8e-56 223.4 180 66.7
MD08G1206600 Malus domestica HOM05D006739 ORTHO05D008402 4.2e-52 210.3 182 61.5
RcHm_v2.0_Chr7g0233521 Rosa chinensis HOM05D006739 ORTHO05D008402 8.8e-50 202.6 255 63.9
MD15G1390100 Malus domestica HOM05D006739 ORTHO05D008402 1.7e-48 198.4 178 60.1
Ciclev10000605m.g Citrus clementina HOM05D006739 ORTHO05D008402 1.7e-45 188.3 180 56.1
FAN08G0673 Fragaria x ananassa HOM05D006739 ORTHO05D008402 1.5e-44 185.3 167 58.1
Prupe.1G539000 Prunus persica HOM05D006739 ORTHO05D008402 1.9e-44 184.9 169 58.6
FvH4_5g34030 Fragaria vesca HOM05D006739 ORTHO05D008402 1.2e-43 182.2 167 56.9
FAN18G3137 Fragaria x ananassa HOM05D006739 ORTHO05D008402 1.2e-43 182.2 167 56.9
Eucgr.F02164 Eucalyptus grandis HOM05D006739 ORTHO05D008402 1.6e-43 181.8 180 57.8
CSS0036090 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 5.2e-42 176.8 180 54.4
Atru.chr13.953 Acer truncatum HOM05D006739 ORTHO05D008402 1.1e-41 175.6 186 54.3
Hma1.2p1_0010F.1_g006410 Hydrangea macrophylla HOM05D006739 ORTHO05D008402 2.6e-41 174.5 182 56.0
Dinv44882 Davidia involucrata HOM05D006739 ORTHO05D008402 2.8e-40 171.0 170 56.5
CSS0033703 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 5.9e-38 163.3 171 53.8
Sabra02G0086200 Salix brachista HOM05D006739 ORTHO05D008402 1.2e-35 155.6 169 53.3
TWI56G0071 Tripterygium wilfordii HOM05D006739 ORTHO05D008402 4.7e-35 153.7 170 49.4
TAR152G0001 Trochodendron aralioides HOM05D006739 ORTHO05D008402 4.7e-35 153.7 192 47.9
TAR628G0153 Trochodendron aralioides HOM05D006739 ORTHO05D008402 1.8e-34 151.8 175 52.6
Potri.002G109500 Populus trichocarpa HOM05D006739 ORTHO05D008402 1.5e-33 148.7 169 54.4
Duzib093G0111 Durio zibethinus HOM05D006739 ORTHO05D008402 2.2e-32 144.8 179 48.0
Manes.05G187600 Manihot esculenta HOM05D006739 ORTHO05D008402 4.1e-31 140.6 176 48.9
Thecc.08G075400 Theobroma cacao HOM05D006739 ORTHO05D008402 4.1e-31 140.6 168 51.2
DCAR_019326 Daucus carota HOM05D006739 ORTHO05D008402 7.0e-31 139.8 177 45.8
ClCG08G011830 Citrullus lanatus HOM05D006739 ORTHO05D008402 1.2e-30 139.0 162 51.9
Nitab4.5_0002667g0060 Nicotiana tabacum HOM05D006739 ORTHO05D008402 7.7e-30 136.3 172 48.3
Rhsim07G0214200 Rhododendron simsii HOM05D006739 ORTHO05D008402 7.7e-30 136.3 170 49.4
EL10Ac1g00466 Beta vulgaris HOM05D006739 ORTHO05D008402 1.3e-29 135.6 168 47.0
VMungo1309G0048 Vigna mungo HOM05D006739 ORTHO05D008402 1.3e-29 135.6 177 49.7
VMungo0647G0534 Vigna mungo HOM05D006739 ORTHO05D008402 2.2e-29 134.8 262 42.0
COL.COLO4_35303 Corchorus olitorius HOM05D006739 ORTHO05D008402 5.0e-29 133.7 165 50.3
Migut.N00013 Erythranthe guttata HOM05D006739 ORTHO05D008402 1.1e-28 132.5 173 48.0
Nitab4.5_0002667g0050 Nicotiana tabacum HOM05D006739 ORTHO05D008402 1.5e-28 132.1 167 48.5
Sc15g0003370 Simmondsia chinensis HOM05D006739 ORTHO05D008402 1.5e-28 132.1 104 66.3
THA.LOC104816789 Tarenaya hassleriana HOM05D006739 ORTHO05D008402 2.5e-28 131.3 169 46.2
Phvul.009G145100 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 7.2e-28 129.8 177 47.5
Carub.0001s0928 Capsella rubella HOM05D006739 ORTHO05D008402 1.6e-27 128.6 174 46.6
CsaV3_2G030450 Cucumis sativus L. HOM05D006739 ORTHO05D008402 1.6e-27 128.6 171 46.2
MELO3C011106.2 Cucumis melo HOM05D006739 ORTHO05D008402 4.7e-27 127.1 171 46.8
MBI16_g36544_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 1.0e-26 125.9 171 46.8
Glyma.06G092600 Glycine max HOM05D006739 ORTHO05D008402 2.3e-26 124.8 173 50.3
MSTRG.24837 Avicennia marina HOM05D006739 ORTHO05D008402 4.0e-26 124.0 171 46.8
AT1G09900 Arabidopsis thaliana HOM05D006739 ORTHO05D008402 1.2e-25 122.5 172 43.6
Cpa.g.sc177.11 Carica papaya HOM05D006739 ORTHO05D008402 1.2e-25 122.5 132 51.5
Lsat_1_v5_gn_1_781 Lactuca sativa HOM05D006739 ORTHO05D008402 1.5e-25 122.1 169 46.2
VMungo0647G1229 Vigna mungo HOM05D006739 ORTHO05D008402 1.5e-25 122.1 138 48.6
Sp1g08530 Schrenkiella parvula HOM05D006739 ORTHO05D008402 3.4e-25 120.9 172 44.2
vmacro04630 Vaccinium macrocarpon HOM05D006739 ORTHO05D008402 3.4e-25 120.9 173 46.2
ECA247G1663 Erigeron canadensis HOM05D006739 ORTHO05D008402 4.4e-25 120.6 167 43.1
Duzib116G0618 Durio zibethinus HOM05D006739 ORTHO05D008402 5.7e-25 120.2 165 44.8
Phvul.008G183900 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 7.5e-25 119.8 139 48.2
Glyma.04G090900 Glycine max HOM05D006739 ORTHO05D008402 1.3e-24 119.0 177 45.8
AL1G20500 Arabidopsis lyrata HOM05D006739 ORTHO05D008402 2.2e-24 118.2 172 43.0
arahy.Tifrunner.gnm1.ann1.CH37P4 Arachis hypogaea HOM05D006739 ORTHO05D008402 2.8e-24 117.9 192 40.1
Phvul.008G184000 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 2.8e-24 117.9 134 51.5
Sed0004950 Sechium edule HOM05D006739 ORTHO05D008402 2.8e-24 117.9 167 47.3
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 3.7e-24 117.5 185 44.9
Aa31LG1G4990 Aethionema arabicum HOM05D006739 ORTHO05D008402 4.9e-24 117.1 170 42.9
Peaxi162Scf01212g00003 Petunia axillaris HOM05D006739 ORTHO05D008402 1.8e-23 115.2 166 44.0
Ah.05g171720 Amaranthus hybridus HOM05D006739 ORTHO05D008402 3.1e-23 114.4 164 43.3
TAR381G0861 Trochodendron aralioides HOM05D006739 ORTHO05D008402 3.1e-23 114.4 181 43.6
Gorai.010G032500 Gossypium raimondii HOM05D006739 ORTHO05D008402 5.4e-23 113.6 164 45.7
CARHR009960 Cardamine hirsuta HOM05D006739 ORTHO05D008402 9.1e-23 112.8 171 43.9
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 1.2e-22 112.5 143 46.9
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 1.2e-22 112.5 143 46.9
Glyma.02G216900 Glycine max HOM05D006739 ORTHO05D008402 1.2e-22 112.5 129 49.6
Gohir.A06G030375 Gossypium hirsutum HOM05D006739 ORTHO05D008402 1.2e-22 112.5 164 45.1
arahy.Tifrunner.gnm1.ann1.M3C1JT Arachis hypogaea HOM05D006739 ORTHO05D008402 2.7e-22 111.3 192 39.1
Glyma.14G184200 Glycine max HOM05D006739 ORTHO05D008402 3.5e-22 110.9 132 49.2
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 7.7e-22 109.8 210 48.6
Hund26833 Selenicereus undatus HOM05D006739 ORTHO05D008402 1.0e-21 109.4 166 44.0
Lj1g0027306 Lotus japonicus HOM05D006739 ORTHO05D008402 2.9e-21 107.8 168 44.0
Sopen06g003030 Solanum pennellii HOM05D006739 ORTHO05D008402 2.9e-21 107.8 179 41.3
Hund26854 Selenicereus undatus HOM05D006739 ORTHO05D008402 3.8e-21 107.5 178 42.7
Actinidia19611 Actinidia chinensis HOM05D006739 ORTHO05D008402 5.0e-21 107.1 156 45.5
DCAR_012846 Daucus carota HOM05D006739 ORTHO05D008402 6.6e-21 106.7 177 40.7
PGSC0003DMG400014713 Solanum tuberosum HOM05D006739 ORTHO05D008402 7.2e-20 103.2 201 38.3
PGSC0003DMG400027357 Solanum tuberosum HOM05D006739 ORTHO05D008402 7.2e-20 103.2 201 38.3
BcaC05g24834 Brassica carinata HOM05D006739 ORTHO05D008402 1.2e-19 102.4 174 40.2
A06p06610 Brassica napus HOM05D006739 ORTHO05D008402 2.1e-19 101.7 168 38.1
BraA06t23875Z Brassica rapa HOM05D006739 ORTHO05D008402 4.7e-19 100.5 168 37.5
HanXRQChr11g0324241 Helianthus annuus HOM05D006739 ORTHO05D008402 4.7e-19 100.5 169 40.2
C05p08020 Brassica napus HOM05D006739 ORTHO05D008402 8.0e-19 99.8 168 38.7
CANSAT25G1844 Cannabis sativa HOM05D006739 ORTHO05D008402 1.8e-18 98.6 164 40.2
Aqoxy5G01872 Aquilegia oxysepala HOM05D006739 ORTHO05D008402 2.3e-18 98.2 89 55.1
BolC5t29554H Brassica oleracea HOM05D006739 ORTHO05D008402 3.0e-18 97.8 168 40.5
Gohir.D06G029600 Gossypium hirsutum HOM05D006739 ORTHO05D008402 3.0e-18 97.8 94 58.5
PSO761G0270 Papaver somniferum HOM05D006739 ORTHO05D008402 3.0e-18 97.8 168 39.9
Oeu020282.1 Olea europaea HOM05D006739 ORTHO05D008402 6.8e-18 96.7 64 67.2
PGR042G0142 Punica granatum HOM05D006739 ORTHO05D008402 8.9e-18 96.3 78 62.8
AUR62019126 Chenopodium quinoa HOM05D006739 ORTHO05D008402 1.2e-17 95.9 77 59.7
Hund26853 Selenicereus undatus HOM05D006739 ORTHO05D008402 2.6e-17 94.7 162 40.7
ATR0800G015 Amborella trichopoda HOM05D006739 ORTHO05D008402 3.4e-17 94.4 112 48.2
AUR62014385 Chenopodium quinoa HOM05D006739 ORTHO05D008402 4.4e-17 94.0 117 47.9
PSO700G0042 Papaver somniferum HOM05D006739 ORTHO05D008402 1.7e-16 92.0 129 45.7
Glyma.14G184300 Glycine max HOM05D006739 ORTHO05D008402 6.3e-16 90.1 209 35.4
Ca_15539_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 5.4e-15 87.0 90 47.8
SalBow5G4649 Salvia bowleyana HOM05D006739 ORTHO05D008402 2.0e-14 85.1 98 52.0
Hund26842 Selenicereus undatus HOM05D006739 ORTHO05D008402 7.3e-12 76.6 132 43.9
CAN.G941.26 Capsicum annuum HOM05D006739 ORTHO05D008402 9.5e-12 76.3 43 81.4
Actinidia19612 Actinidia chinensis HOM05D006739 ORTHO05D008402 1.2e-11 75.9 109 82.6
CDE04G0064 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 8.0e-11 73.2 96 44.8
Dinv22007 Davidia involucrata HOM05D006739 ORTHO05D008402 1.4e-10 72.4 109 81.7
Oeu012210.1 Olea europaea HOM05D006739 ORTHO05D008402 1.4e-10 72.4 38 81.6
Cc10_g08260 Coffea canephora HOM05D008425 ORTHO05D010555 2.3e-10 71.6 109 78.0
CDE06G1140 Ceratophyllum demersum HOM05D002753 ORTHO05D003097 5.2e-10 70.5 96 43.8
CDE07G2071 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 8.9e-10 69.7 90 45.6
Psat5g018720 Pisum sativum HOM05D006739 ORTHO05D008402 1.5e-09 68.9 86 47.7
SGA_v2.0_scaffold123G33426 Striga asiatica HOM05D006739 ORTHO05D008402 1.5e-09 68.9 93 44.1
HPP92_004375 Vanilla planifolia HOM05D006739 ORTHO05D008402 3.7e-08 64.3 60 51.7
CDE01G0171 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 4.9e-08 63.9 57 45.6
MBI16_g14339_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 8.3e-08 63.2 109 75.2
TPR.G12357 Trifolium pratense HOM05D006739 ORTHO05D008402 8.3e-08 63.2 96 37.5
TPR.G15758 Trifolium pratense HOM05D000069 ORTHO05D001849 1.9e-07 62.0 60 48.3
Phvul.008G151824 Phaseolus vulgaris HOM05D007620 ORTHO05D009568 5.4e-07 60.5 80 42.5
Glyma.20G222800 Glycine max HOM05D007620 ORTHO05D009568 9.2e-07 59.7 83 38.6
ATR0736G141 Amborella trichopoda HOM05D007620 ORTHO05D009568 2.7e-06 58.2 103 35.0
VMungo0720G2663 Vigna mungo HOM05D007620 ORTHO05D009568 2.7e-06 58.2 80 40.0
HPP92_004376 Vanilla planifolia HOM05D006739 ORTHO05D008402 3.5e-06 57.8 60 48.3


User provided reference genes

Program Settings