Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 7.2e-195 683.7 344 100.0
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 1.0e-188 663.3 343 96.5
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 8.1e-162 573.9 347 83.0
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 3.0e-148 528.9 342 76.0
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 9.9e-136 487.3 344 70.1
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 1.7e-135 486.5 345 68.4
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 2.7e-133 479.2 342 68.1
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 1.8e-132 476.5 346 68.2
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 1.1e-131 473.8 346 68.5
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 1.9e-131 473.0 346 69.4
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 1.3e-130 470.3 340 68.2
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 1.6e-130 469.9 342 67.3
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 1.6e-130 469.9 354 66.7
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 4.8e-130 468.4 347 66.6
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 1.4e-129 466.8 342 67.0
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 1.8e-129 466.5 344 66.9
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 5.3e-129 464.9 342 67.3
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 3.0e-124 449.1 343 65.9
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 3.0e-124 449.1 345 64.9
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 3.3e-123 445.7 345 65.8
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 1.1e-121 440.7 342 65.2
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 9.0e-121 437.6 345 64.6
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 2.0e-120 436.4 347 64.0
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.1e-118 430.6 349 62.2
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 3.2e-118 429.1 343 64.1
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 5.5e-118 428.3 345 62.6
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 5.5e-118 428.3 345 62.3
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 5.5e-118 428.3 349 62.5
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 2.1e-117 426.4 345 62.6
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 3.5e-117 425.6 346 63.3
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 7.9e-117 424.5 343 63.3
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 1.0e-116 424.1 341 62.2
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 3.3e-115 419.1 349 62.5
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.6e-114 416.8 361 59.6
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 5.3e-113 411.8 349 57.9
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 8.5e-111 404.4 341 62.2
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 3.2e-110 402.5 349 61.3
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 1.4e-108 397.1 276 69.2
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 3.0e-108 396.0 344 59.3
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 3.0e-108 396.0 342 57.6
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 2.0e-107 393.3 277 69.7
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 2.0e-107 393.3 344 60.2
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 2.5e-107 392.9 346 59.5
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 1.3e-106 390.6 343 59.2
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 1.3e-106 390.6 335 60.0
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 2.8e-106 389.4 344 59.6
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 3.1e-105 386.0 343 59.2
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 4.1e-105 385.6 352 57.7
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 9.1e-105 384.4 344 59.0
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 3.4e-104 382.5 341 58.7
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 4.5e-104 382.1 345 58.6
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 7.7e-104 381.3 342 58.5
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 1.0e-103 380.9 343 58.9
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 1.9e-102 376.7 340 57.1
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 5.5e-102 375.2 345 56.8
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 5.5e-102 375.2 350 56.9
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 1.6e-101 373.6 427 48.2
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 4.7e-101 372.1 341 56.9
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 6.1e-101 371.7 343 58.9
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 1.0e-100 370.9 340 55.3
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 2.3e-100 369.8 340 56.8
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 2.3e-100 369.8 340 57.1
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 3.0e-100 369.4 383 52.7
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 3.9e-100 369.0 337 57.0
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 2.6e-99 366.3 343 55.1
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 5.7e-99 365.2 339 56.6
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 7.4e-99 364.8 345 56.8
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 1.3e-98 364.0 355 56.1
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 1.7e-95 353.6 352 52.6
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 2.2e-95 353.2 345 54.8
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 6.5e-95 351.7 354 52.0
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 1.1e-94 350.9 343 55.4
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 4.2e-94 349.0 333 57.7
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 4.2e-94 349.0 344 53.2
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 1.6e-93 347.1 334 56.0
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 6.1e-93 345.1 355 54.1
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 8.0e-93 344.7 353 53.5
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 6.7e-92 341.7 334 54.5
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 9.7e-91 337.8 348 52.6
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 1.7e-90 337.0 343 54.8
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 2.0e-88 330.1 336 53.6
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 3.5e-88 329.3 276 58.7
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 3.5e-88 329.3 309 56.0
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 1.3e-87 327.4 338 51.2
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 3.4e-83 312.8 338 49.4
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 1.3e-82 310.8 346 50.6
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 1.8e-81 307.0 283 57.6
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 2.9e-79 299.7 212 69.3
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 2.8e-74 283.1 342 45.6
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 3.7e-74 282.7 212 67.5
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 1.2e-59 234.6 250 51.6
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 4.4e-51 206.1 298 45.6
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 3.2e-49 199.9 175 56.0
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 2.7e-48 196.8 326 35.0
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 3.5e-48 196.4 176 56.2
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 2.6e-43 180.3 185 51.9
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 1.9e-38 164.1 93 88.2
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea HOM05D006958 ORTHO05D008814 3.3e-38 163.3 269 39.0
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 4.0e-36 156.4 195 47.7
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 4.2e-33 146.4 265 34.3
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 5.6e-30 136.0 331 30.5
Os07g0586000 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 7.3e-30 135.6 169 44.4
SEGI_02529 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 1.8e-28 131.0 165 40.6
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 3.1e-28 130.2 132 53.8
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 9.9e-27 125.2 126 55.6
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 7.1e-25 119.0 113 53.1
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 5.1e-23 112.8 149 43.6
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 1.6e-21 107.8 110 51.8
Psat7g107960 Pisum sativum HOM05D006958 ORTHO05D008814 3.8e-18 96.7 107 46.7
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 1.2e-16 91.7 87 47.1
Glyma.07G264001 Glycine max HOM05D006958 ORTHO05D008814 2.6e-11 73.9 75 53.3
Nn5g30604 Nelumbo nucifera HOM05D006958 ORTHO05D008814 4.2e-09 66.6 74 50.0
Ah.09g227430 Amaranthus hybridus HOM05D006958 ORTHO05D008814 1.2e-08 65.1 71 46.5
Psat0s3396g0160 Pisum sativum HOM05D006958 ORTHO05D008814 3.0e-07 60.5 40 67.5
EL10Ac1g02376 Beta vulgaris HOM05D006958 ORTHO05D008814 8.7e-07 58.9 66 51.5


User provided reference genes

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