Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013733 Carpinus fangiana HOM05D007224 ORTHO05D009169 3.0e-129 465.3 257 100.0
Haze_22381 Corylus avellana HOM05D007224 ORTHO05D009169 4.1e-118 428.3 247 93.9
CiPaw.07G171700 Carya illinoinensis HOM05D007224 ORTHO05D009169 1.6e-109 399.8 258 79.8
GSVIVG01009296001 Vitis vinifera HOM05D007224 ORTHO05D009169 5.2e-89 331.6 268 67.2
Prupe.1G418700 Prunus persica HOM05D007224 ORTHO05D009169 1.1e-86 323.9 273 70.7
MD15G1064800 Malus domestica HOM05D007224 ORTHO05D009169 1.9e-86 323.2 278 67.6
RcHm_v2.0_Chr6g0310081 Rosa chinensis HOM05D007224 ORTHO05D009169 1.9e-86 323.2 274 67.5
MD08G1077300 Malus domestica HOM05D007224 ORTHO05D009169 1.2e-85 320.5 279 67.4
CsaV3_2G025920 Cucumis sativus L. HOM05D007224 ORTHO05D009169 7.8e-85 317.8 265 64.2
Haze_22389 Corylus avellana HOM05D007224 ORTHO05D009169 1.3e-84 317.0 186 94.1
Atru.chr13.874 Acer truncatum HOM05D007224 ORTHO05D009169 1.7e-84 316.6 270 63.7
TAR628G0831 Trochodendron aralioides HOM05D007224 ORTHO05D009169 6.6e-84 314.7 263 67.7
CANSAT56G0920 Cannabis sativa HOM05D007224 ORTHO05D009169 8.6e-84 314.3 276 65.2
TWI56G1112 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 8.6e-84 314.3 267 66.3
MELO3C010785.2 Cucumis melo HOM05D007224 ORTHO05D009169 1.5e-83 313.5 265 63.4
TWI12G0175 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 7.3e-83 311.2 273 65.2
FAN27G0962 Fragaria x ananassa HOM05D007224 ORTHO05D009169 8.1e-82 307.8 264 64.4
FvH4_2g32650 Fragaria vesca HOM05D007224 ORTHO05D009169 3.1e-81 305.8 269 66.5
FAN20G0095 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.7e-79 300.1 271 62.4
Gorai.010G028000 Gossypium raimondii HOM05D007224 ORTHO05D009169 2.9e-79 299.3 272 59.6
ClCG08G016710 Citrullus lanatus HOM05D007224 ORTHO05D009169 6.4e-79 298.1 255 63.1
Ciclev10002194m.g Citrus clementina HOM05D007224 ORTHO05D009169 1.4e-78 297.0 269 61.3
Gohir.D06G023300 Gossypium hirsutum HOM05D007224 ORTHO05D009169 1.4e-78 297.0 274 58.8
Lj4A752T19 Lonicera japonica HOM05D007224 ORTHO05D009169 1.4e-78 297.0 277 61.4
Gohir.A06G026200 Gossypium hirsutum HOM05D007224 ORTHO05D009169 4.1e-78 295.4 268 59.3
Hund05274 Selenicereus undatus HOM05D007224 ORTHO05D009169 1.2e-77 293.9 278 60.4
CAN.G1239.16 Capsicum annuum HOM05D007224 ORTHO05D009169 2.7e-77 292.7 277 58.5
Dinv44928 Davidia involucrata HOM05D007224 ORTHO05D009169 1.7e-76 290.0 272 65.1
Duzib116G0584 Durio zibethinus HOM05D007224 ORTHO05D009169 1.7e-76 290.0 269 59.1
Nn5g30669 Nelumbo nucifera HOM05D007224 ORTHO05D009169 2.3e-76 289.7 272 61.8
PSO541G3785 Papaver somniferum HOM05D007224 ORTHO05D009169 2.3e-76 289.7 272 59.9
FAN24G0100 Fragaria x ananassa HOM05D007224 ORTHO05D009169 3.0e-76 289.3 268 63.8
Manes.18G049850 Manihot esculenta HOM05D007224 ORTHO05D009169 3.0e-76 289.3 273 66.3
Potri.002G114900 Populus trichocarpa HOM05D007224 ORTHO05D009169 6.6e-76 288.1 271 64.6
Actinidia10224 Actinidia chinensis HOM05D007224 ORTHO05D009169 1.1e-75 287.3 263 59.7
Solyc04g077500.4 Solanum lycopersicum HOM05D007224 ORTHO05D009169 3.3e-75 285.8 288 54.9
Peaxi162Scf01161g00120 Petunia axillaris HOM05D007224 ORTHO05D009169 5.6e-75 285.0 276 59.4
AT1G44920 Arabidopsis thaliana HOM05D007224 ORTHO05D009169 9.5e-75 284.3 258 59.7
Nitab4.5_0001494g0030 Nicotiana tabacum HOM05D007224 ORTHO05D009169 9.5e-75 284.3 284 56.0
Sopen04g031100 Solanum pennellii HOM05D007224 ORTHO05D009169 9.5e-75 284.3 288 54.5
Thecc.08G084200 Theobroma cacao HOM05D007224 ORTHO05D009169 9.5e-75 284.3 276 62.0
BcaC08g42889 Brassica carinata HOM05D007224 ORTHO05D009169 1.6e-74 283.5 257 58.8
PGR083G2708 Punica granatum HOM05D007224 ORTHO05D009169 1.6e-74 283.5 266 64.3
THA.LOC104799830 Tarenaya hassleriana HOM05D007224 ORTHO05D009169 2.8e-74 282.7 273 57.1
PSO675G4824 Papaver somniferum HOM05D007224 ORTHO05D009169 3.6e-74 282.3 274 60.2
Lj5g0004917 Lotus japonicus HOM05D007224 ORTHO05D009169 1.4e-73 280.4 271 60.5
PGSC0003DMG400004920 Solanum tuberosum HOM05D007224 ORTHO05D009169 3.1e-73 279.3 291 54.3
Ah.11g039150 Amaranthus hybridus HOM05D007224 ORTHO05D009169 5.2e-73 278.5 275 61.1
Ca_06981_v3 Cicer arietinum L. HOM05D007224 ORTHO05D009169 5.2e-73 278.5 256 60.5
A10p07160 Brassica napus HOM05D007224 ORTHO05D009169 1.2e-72 277.3 257 58.0
AL1G52590 Arabidopsis lyrata HOM05D007224 ORTHO05D009169 2.6e-72 276.2 259 58.3
BcaB07g33899 Brassica carinata HOM05D007224 ORTHO05D009169 7.6e-72 274.6 267 58.8
MSTRG.22207 Avicennia marina HOM05D007224 ORTHO05D009169 1.7e-71 273.5 271 57.2
Sc26g0004240 Simmondsia chinensis HOM05D007224 ORTHO05D009169 1.7e-71 273.5 266 59.0
Phvul.001G031100 Phaseolus vulgaris HOM05D007224 ORTHO05D009169 3.8e-71 272.3 249 62.2
VMungo0647G2475 Vigna mungo HOM05D007224 ORTHO05D009169 3.8e-71 272.3 248 62.5
HanXRQChr04g0110471 Helianthus annuus HOM05D007224 ORTHO05D009169 8.4e-71 271.2 254 61.4
Sp1g33790 Schrenkiella parvula HOM05D007224 ORTHO05D009169 8.4e-71 271.2 260 57.7
Thhalv10011734m.g Eutrema salsugineum HOM05D007224 ORTHO05D009169 1.1e-70 270.8 258 57.0
CSS0049759 Camellia sinensis var. sinensis HOM05D007224 ORTHO05D009169 1.4e-70 270.4 270 58.5
Glyma.17G232300 Glycine max HOM05D007224 ORTHO05D009169 1.4e-70 270.4 266 63.5
EL10Ac1g02348 Beta vulgaris HOM05D007224 ORTHO05D009169 2.4e-70 269.6 253 61.7
CARHR036150 Cardamine hirsuta HOM05D007224 ORTHO05D009169 3.2e-70 269.2 256 56.2
FAN15G3290 Fragaria x ananassa HOM05D007224 ORTHO05D009169 4.1e-70 268.9 209 67.5
BolC6t35243H Brassica oleracea HOM05D007224 ORTHO05D009169 5.4e-70 268.5 275 54.2
Aqoxy6G02448 Aquilegia oxysepala HOM05D007224 ORTHO05D009169 7.1e-70 268.1 267 64.0
TPR.G13169 Trifolium pratense HOM05D007224 ORTHO05D009169 7.1e-70 268.1 268 56.3
C06p01100 Brassica napus HOM05D007224 ORTHO05D009169 9.2e-70 267.7 248 57.7
SalBow7G4028 Salvia bowleyana HOM05D007224 ORTHO05D009169 1.2e-69 267.3 255 60.0
Carub.0001s3542 Capsella rubella HOM05D007224 ORTHO05D009169 2.1e-69 266.5 261 57.5
Rhsim06G0064800 Rhododendron simsii HOM05D007224 ORTHO05D009169 2.1e-69 266.5 253 62.5
SGA_v2.0_scaffold238G43907 Striga asiatica HOM05D007224 ORTHO05D009169 3.5e-69 265.8 266 60.9
vmacro21415 Vaccinium macrocarpon HOM05D007224 ORTHO05D009169 3.5e-69 265.8 273 57.9
Lsat_1_v5_gn_0_47281 Lactuca sativa HOM05D007224 ORTHO05D009169 4.6e-69 265.4 253 56.9
Migut.C00453 Erythranthe guttata HOM05D007224 ORTHO05D009169 6.0e-69 265.0 270 60.7
Lalb_Chr22g0355811 Lupinus albus HOM05D007224 ORTHO05D009169 6.0e-69 265.0 267 58.8
Cc10_g07670 Coffea canephora HOM05D007224 ORTHO05D009169 1.7e-68 263.5 271 57.6
Sabra02G0090900 Salix brachista HOM05D007224 ORTHO05D009169 5.1e-68 261.9 318 52.8
DCAR_009866 Daucus carota HOM05D007224 ORTHO05D009169 6.6e-68 261.5 256 55.9
Medtr1g017450 Medicago truncatula HOM05D007224 ORTHO05D009169 1.9e-67 260.0 250 57.2
CDE04G2175 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 2.5e-67 259.6 265 55.1
COL.COLO4_28456 Corchorus olitorius HOM05D007224 ORTHO05D009169 3.3e-67 259.2 257 59.1
Psat6g017040 Pisum sativum HOM05D007224 ORTHO05D009169 4.7e-66 255.4 258 55.0
BraA10t42965Z Brassica rapa HOM05D007224 ORTHO05D009169 1.1e-65 254.2 273 52.7
MBI16_g06074_MAGBIO Magnolia biondii HOM05D007224 ORTHO05D009169 8.9e-65 251.1 254 57.9
Nitab4.5_0010252g0010 Nicotiana tabacum HOM05D007224 ORTHO05D009169 8.9e-65 251.1 278 57.6
arahy.Tifrunner.gnm1.ann1.TQ0B6U Arachis hypogaea HOM05D007224 ORTHO05D009169 1.1e-62 244.2 244 58.2
Aa31LG7G10090 Aethionema arabicum HOM05D007224 ORTHO05D009169 1.4e-62 243.8 205 60.5
unitig_52.g17426 Utricularia gibba HOM05D007224 ORTHO05D009169 1.7e-60 236.9 187 63.6
Zm00001eb056020 Zea mays HOM05D007224 ORTHO05D009169 8.7e-60 234.6 270 49.3
ATR0739G089 Amborella trichopoda HOM05D007224 ORTHO05D009169 3.3e-59 232.6 261 52.1
HPP92_007712 Vanilla planifolia HOM05D007224 ORTHO05D009169 9.6e-59 231.1 261 50.6
arahy.Tifrunner.gnm1.ann1.XZQ8AB Arachis hypogaea HOM05D007224 ORTHO05D009169 5.1e-52 208.8 211 61.6
Os03g0729100 Oryza sativa ssp. japonica HOM05D007224 ORTHO05D009169 2.5e-51 206.5 180 58.3
ECA232G4225 Erigeron canadensis HOM05D007224 ORTHO05D009169 2.8e-50 203.0 138 69.6
Actinidia19293 Actinidia chinensis HOM05D007224 ORTHO05D009169 5.5e-46 188.7 200 60.0
Sed0020426 Sechium edule HOM05D007224 ORTHO05D009169 3.9e-44 182.6 186 53.8
Mapoly0039s0075 Marchantia polymorpha HOM05D007224 ORTHO05D009169 2.5e-43 179.9 180 50.0
Pp3c6_15140 Physcomitrium patens HOM05D007224 ORTHO05D009169 6.2e-42 175.3 185 47.0
SMO147G0155 Selaginella moellendorffii HOM05D007224 ORTHO05D009169 2.4e-41 173.3 183 46.4
CDE07G0245 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 4.9e-39 165.6 205 45.9
CBR_g45556 Chara braunii HOM05D000019 ORTHO05D000002 6.0e-37 158.7 180 45.0
Glyma.14G089100 Glycine max HOM05D007224 ORTHO05D009169 7.6e-32 141.7 92 72.8
Cre13.g569250 Chlamydomonas reinhardtii HOM05D007224 ORTHO05D009169 7.2e-30 135.2 197 40.6
Cpa.g.sc2059.2 Carica papaya HOM05D007224 ORTHO05D009169 8.7e-28 128.3 156 54.5
AUR62033890 Chenopodium quinoa HOM05D007224 ORTHO05D009169 5.7e-27 125.6 202 45.5
AUR62024535 Chenopodium quinoa HOM05D007224 ORTHO05D009169 5.3e-25 119.0 83 71.1
MCO05G240 Micromonas commoda HOM05D007224 ORTHO05D009169 3.0e-20 103.2 150 38.7
Zm00001eb035950 Zea mays HOM05D007224 ORTHO05D009169 1.5e-16 90.9 76 53.9
Zm00001eb141580 Zea mays HOM05D007224 ORTHO05D445531 1.4e-14 84.3 95 48.4
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 7.4e-11 72.0 41 85.4


User provided reference genes

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