Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 2.5e-160 568.9 328 100.0
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 8.8e-150 533.9 327 78.3
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 2.8e-148 528.9 328 92.1
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 1.9e-144 516.2 330 77.0
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 2.7e-143 512.3 326 90.2
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 8.0e-143 510.8 328 89.3
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 2.0e-141 506.1 328 89.0
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 2.2e-140 502.7 328 88.4
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 3.7e-140 501.9 328 87.8
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 4.9e-140 501.5 328 86.3
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 1.8e-139 499.6 327 88.4
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 5.4e-139 498.0 326 88.3
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 7.0e-139 497.7 328 87.5
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 2.0e-138 496.1 328 87.2
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 1.0e-137 493.8 326 87.7
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 1.3e-137 493.4 326 77.6
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 3.8e-137 491.9 326 87.7
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 5.0e-137 491.5 326 87.4
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 1.9e-136 489.6 328 86.0
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 2.5e-136 489.2 326 86.5
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 2.1e-135 486.1 324 71.9
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 3.6e-135 485.3 324 83.0
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 3.6e-135 485.3 324 86.1
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 4.7e-135 485.0 328 72.0
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 6.1e-135 484.6 327 86.2
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 8.0e-135 484.2 328 85.1
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 1.4e-134 483.4 328 84.8
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 1.4e-134 483.4 324 71.6
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 1.4e-134 483.4 326 69.9
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 1.8e-134 483.0 324 85.5
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 2.3e-134 482.6 328 78.0
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 2.3e-134 482.6 328 86.0
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 3.0e-134 482.3 324 85.5
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 4.0e-134 481.9 328 72.3
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 5.2e-134 481.5 328 84.8
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 8.9e-134 480.7 322 70.5
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 2.0e-133 479.6 328 86.3
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 2.0e-133 479.6 328 70.1
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 2.0e-133 479.6 325 70.5
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 4.4e-133 478.4 328 73.2
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 5.7e-133 478.0 328 85.4
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 1.3e-132 476.9 327 72.8
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 1.7e-132 476.5 328 84.5
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 2.9e-132 475.7 324 81.5
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 3.7e-132 475.3 327 83.8
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 3.7e-132 475.3 328 81.4
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 1.1e-131 473.8 325 71.4
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 3.2e-131 472.2 328 85.1
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 3.2e-131 472.2 324 69.4
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 4.1e-131 471.9 328 84.8
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 4.1e-131 471.9 328 69.5
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 7.0e-131 471.1 328 68.3
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 7.0e-131 471.1 328 81.4
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 9.2e-131 470.7 324 85.2
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 2.0e-130 469.5 327 83.2
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 4.6e-130 468.4 328 68.6
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 1.0e-129 467.2 328 81.7
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 6.6e-129 464.5 237 90.3
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 1.1e-128 463.8 324 68.8
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 1.5e-128 463.4 328 80.5
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 1.5e-128 463.4 324 83.6
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 7.3e-128 461.1 328 81.7
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 9.5e-128 460.7 326 66.0
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 9.5e-128 460.7 237 88.2
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 1.0e-126 457.2 325 81.2
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 1.2e-125 453.8 325 65.8
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 2.6e-125 452.6 325 66.5
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 3.4e-125 452.2 325 80.3
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 5.8e-125 451.4 325 73.2
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 5.8e-125 451.4 323 66.3
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 7.5e-125 451.1 326 66.6
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 9.8e-125 450.7 325 79.7
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.7e-124 449.9 325 79.7
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 9.2e-123 444.1 236 85.6
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 1.7e-121 439.9 323 72.8
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 5.0e-121 438.3 237 86.1
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 1.1e-120 437.2 369 69.1
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 1.5e-120 436.8 333 78.1
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 1.9e-120 436.4 322 77.6
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 5.6e-120 434.9 325 77.8
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 6.2e-119 431.4 323 78.0
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 1.8e-118 429.9 329 76.3
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 5.2e-118 428.3 323 67.8
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 8.9e-118 427.6 323 62.5
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 4.4e-117 425.2 323 62.2
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 5.8e-117 424.9 323 62.5
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 7.5e-117 424.5 323 61.9
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 1.9e-115 419.9 323 61.3
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 8.6e-113 411.0 324 61.4
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 5.6e-112 408.3 317 77.6
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 7.3e-112 407.9 335 62.4
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 2.1e-111 406.4 324 61.4
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 8.9e-110 401.0 328 75.9
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 9.9e-109 397.5 319 60.5
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 3.2e-107 392.5 232 75.9
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 4.6e-106 388.7 311 74.3
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 8.4e-100 367.9 325 54.8
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 3.5e-98 362.5 260 68.5
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 8.7e-97 357.8 263 84.4
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 5.6e-96 355.1 281 81.9
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 2.1e-95 353.2 320 68.8
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 5.8e-93 345.1 323 68.1
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 2.4e-91 339.7 261 80.5
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 1.3e-89 334.0 246 67.9
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 5.1e-81 305.4 249 81.1
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 9.3e-75 284.6 247 75.3
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 3.4e-69 266.2 374 38.2
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 1.8e-65 253.8 251 68.9
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 4.8e-63 245.7 329 46.2
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 1.1e-62 244.6 191 63.9
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 1.4e-62 244.2 228 53.1
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 2.0e-61 240.4 138 81.9
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 5.1e-57 225.7 189 57.1
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 1.4e-54 217.6 126 80.2
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 1.6e-50 204.1 124 73.4
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 2.1e-42 177.2 94 85.1
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 1.1e-19 101.7 87 64.4
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 5.2e-17 92.8 85 51.8
Actinidia08259 Actinidia chinensis HOM05D006600 ORTHO05D008446 6.8e-09 65.9 42 69.0
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 9.8e-08 62.0 57 56.1
GSVIVG01038121001 Vitis vinifera HOM05D006600 ORTHO05D008446 9.8e-08 62.0 43 67.4
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 5.4e-06 56.2 153 30.1
MELO3C023799.2 Cucumis melo HOM05D006600 ORTHO05D168989 7.0e-06 55.8 40 70.0


User provided reference genes

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