Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013658 Carpinus fangiana HOM05D004580 ORTHO05D005917 8.5e-229 796.6 384 100.0
Haze_22292 Corylus avellana HOM05D004580 ORTHO05D005917 1.0e-218 763.1 387 95.1
CiPaw.07G178200 Carya illinoinensis HOM05D004580 ORTHO05D005917 1.1e-194 683.3 386 85.8
Manes.18G065933 Manihot esculenta HOM05D004580 ORTHO05D005917 4.9e-184 647.9 382 80.6
Ciclev10001487m.g Citrus clementina HOM05D004580 ORTHO05D005917 1.1e-180 636.7 385 79.2
QL12p037342 Quercus lobata HOM05D004580 ORTHO05D005917 1.1e-180 636.7 359 83.3
Lsat_1_v5_gn_4_64561 Lactuca sativa HOM05D004580 ORTHO05D005917 6.2e-179 630.9 364 81.3
Atru.chr13.1137 Acer truncatum HOM05D004580 ORTHO05D005917 1.8e-178 629.4 385 78.4
Duzib093G0091 Durio zibethinus HOM05D004580 ORTHO05D005917 3.1e-178 628.6 369 79.9
Hma1.2p1_0044F.1_g026170 Hydrangea macrophylla HOM05D004580 ORTHO05D005917 9.0e-178 627.1 380 78.7
Dinv17643 Davidia involucrata HOM05D004580 ORTHO05D005917 6.4e-176 620.9 346 85.0
CsaV3_2G029780 Cucumis sativus L. HOM05D004580 ORTHO05D005917 8.4e-176 620.5 377 79.6
THA.LOC104813113 Tarenaya hassleriana HOM05D004580 ORTHO05D005917 8.4e-176 620.5 374 79.9
Nn5g30036 Nelumbo nucifera HOM05D004580 ORTHO05D005917 1.9e-175 619.4 372 79.3
Eucgr.B00032 Eucalyptus grandis HOM05D004580 ORTHO05D005917 2.4e-175 619.0 398 75.9
MELO3C011036.2 Cucumis melo HOM05D004580 ORTHO05D005917 3.2e-175 618.6 377 78.5
Gorai.010G039500 Gossypium raimondii HOM05D004580 ORTHO05D005917 9.3e-175 617.1 372 78.0
ClCG08G011200 Citrullus lanatus HOM05D004580 ORTHO05D005917 1.6e-174 616.3 362 81.2
Sed0021368 Sechium edule HOM05D004580 ORTHO05D005917 2.1e-174 615.9 375 78.7
TWI12G1022 Tripterygium wilfordii HOM05D004580 ORTHO05D005917 2.7e-174 615.5 384 76.0
Gohir.A06G034900 Gossypium hirsutum HOM05D004580 ORTHO05D005917 3.5e-174 615.1 372 77.7
COL.COLO4_12032 Corchorus olitorius HOM05D004580 ORTHO05D005917 6.0e-174 614.4 381 76.6
PGR031G1028 Punica granatum HOM05D004580 ORTHO05D005917 7.9e-174 614.0 396 74.7
Gohir.D06G035500 Gossypium hirsutum HOM05D004580 ORTHO05D005917 1.3e-173 613.2 372 77.7
Prupe.1G521000 Prunus persica HOM05D004580 ORTHO05D005917 1.5e-172 609.8 385 75.8
Potri.005G162900 Populus trichocarpa HOM05D004580 ORTHO05D005917 1.9e-172 609.4 390 75.4
TAR625G1360 Trochodendron aralioides HOM05D004580 ORTHO05D005917 2.5e-172 609.0 348 82.8
Actinidia04333 Actinidia chinensis HOM05D004580 ORTHO05D005917 3.3e-172 608.6 376 76.6
AT4G08960 Arabidopsis thaliana HOM05D004580 ORTHO05D005917 3.3e-172 608.6 379 77.0
AL6G41550 Arabidopsis lyrata HOM05D004580 ORTHO05D005917 5.6e-172 607.8 378 76.2
FvH4_6g23990 Fragaria vesca HOM05D004580 ORTHO05D005917 7.4e-172 607.4 386 76.4
FAN14G1039 Fragaria x ananassa HOM05D004580 ORTHO05D005917 7.4e-172 607.4 386 76.4
CANSAT25G2089 Cannabis sativa HOM05D004580 ORTHO05D005917 1.3e-171 606.7 395 75.2
Thecc.08G104300 Theobroma cacao HOM05D004580 ORTHO05D005917 1.6e-171 606.3 376 76.3
Carub.0006s2756 Capsella rubella HOM05D004580 ORTHO05D005917 4.8e-171 604.7 378 76.2
Duzib041G0230 Durio zibethinus HOM05D004580 ORTHO05D005917 4.8e-171 604.7 377 76.4
Thhalv10028722m.g Eutrema salsugineum HOM05D004580 ORTHO05D005917 4.8e-171 604.7 390 75.4
CARHR259970 Cardamine hirsuta HOM05D004580 ORTHO05D005917 8.1e-171 604.0 378 76.2
BcaB01g02381 Brassica carinata HOM05D004580 ORTHO05D005917 1.1e-170 603.6 376 76.6
Sp6g08660 Schrenkiella parvula HOM05D004580 ORTHO05D005917 1.1e-170 603.6 359 79.4
MD15G1419400 Malus domestica HOM05D004580 ORTHO05D005917 4.0e-170 601.7 362 77.3
Aa31LG9G14650 Aethionema arabicum HOM05D004580 ORTHO05D005917 5.3e-170 601.3 386 75.4
Sabra05G0123100 Salix brachista HOM05D004580 ORTHO05D005917 6.9e-170 600.9 384 75.3
ECA236G1081 Erigeron canadensis HOM05D004580 ORTHO05D005917 9.0e-170 600.5 376 75.5
arahy.Tifrunner.gnm1.ann1.UE4JHM Arachis hypogaea HOM05D004580 ORTHO05D005917 4.5e-169 598.2 348 80.5
BcaC01g04745 Brassica carinata HOM05D004580 ORTHO05D005917 5.8e-169 597.8 384 74.5
BcaB01g02835 Brassica carinata HOM05D004580 ORTHO05D005917 1.7e-168 596.3 384 74.2
MD08G1227100 Malus domestica HOM05D004580 ORTHO05D005917 2.9e-168 595.5 349 78.8
RcHm_v2.0_Chr1g0321971 Rosa chinensis HOM05D004580 ORTHO05D005917 2.9e-168 595.5 390 74.4
C09p37760 Brassica napus HOM05D004580 ORTHO05D005917 3.8e-168 595.1 373 75.9
BolC9t56609H Brassica oleracea HOM05D004580 ORTHO05D005917 3.8e-168 595.1 373 75.9
BcaB01g02823 Brassica carinata HOM05D004580 ORTHO05D005917 8.4e-168 594.0 384 74.0
RcHm_v2.0_Chr7g0243401 Rosa chinensis HOM05D004580 ORTHO05D005917 8.4e-168 594.0 359 78.8
arahy.Tifrunner.gnm1.ann1.T3Z839 Arachis hypogaea HOM05D004580 ORTHO05D005917 1.1e-167 593.6 345 80.6
C03p34240 Brassica napus HOM05D004580 ORTHO05D005917 4.2e-167 591.7 382 74.3
BolC3t15733H Brassica oleracea HOM05D004580 ORTHO05D005917 4.2e-167 591.7 382 74.3
A03p28330 Brassica napus HOM05D004580 ORTHO05D005917 9.3e-167 590.5 382 73.8
BraA03t12037Z Brassica rapa HOM05D004580 ORTHO05D005917 1.2e-166 590.1 382 74.1
TAR381G0740 Trochodendron aralioides HOM05D004580 ORTHO05D005917 1.6e-166 589.7 374 75.9
FAN05G1019 Fragaria x ananassa HOM05D004580 ORTHO05D005917 3.5e-166 588.6 348 79.6
Potri.002G099000 Populus trichocarpa HOM05D004580 ORTHO05D005917 1.0e-165 587.0 386 74.1
CSS0036827 Camellia sinensis var. sinensis HOM05D004580 ORTHO05D005917 2.3e-165 585.9 358 78.8
Phvul.011G102600 Phaseolus vulgaris HOM05D004580 ORTHO05D005917 3.0e-165 585.5 361 77.0
Nn5g30292 Nelumbo nucifera HOM05D004580 ORTHO05D005917 5.1e-165 584.7 340 81.5
VMungo1127G0933 Vigna mungo HOM05D004580 ORTHO05D005917 6.7e-165 584.3 359 77.2
CSS0039091 Camellia sinensis var. sinensis HOM05D004580 ORTHO05D005917 1.1e-164 583.6 357 78.7
PSO541G6503 Papaver somniferum HOM05D004580 ORTHO05D005917 1.4e-162 576.6 371 73.0
HanXRQChr04g0124871 Helianthus annuus HOM05D004580 ORTHO05D005917 5.3e-162 574.7 383 70.8
Sc10g0006870 Simmondsia chinensis HOM05D004580 ORTHO05D005917 9.0e-162 573.9 389 71.2
Cpa.g.sc36.160 Carica papaya HOM05D004580 ORTHO05D005917 1.5e-161 573.2 384 71.6
ClCG11G014220 Citrullus lanatus HOM05D004580 ORTHO05D005917 2.9e-160 568.9 373 74.8
vmacro15988 Vaccinium macrocarpon HOM05D004580 ORTHO05D005917 3.8e-160 568.5 361 73.7
GSVIVG01009068001 Vitis vinifera HOM05D004580 ORTHO05D005917 3.8e-160 568.5 346 78.9
Aqoxy7G04111 Aquilegia oxysepala HOM05D004580 ORTHO05D005917 8.4e-160 567.4 346 78.9
Nn1g05417 Nelumbo nucifera HOM05D004580 ORTHO05D005917 8.4e-160 567.4 332 80.1
BcaC04g20934 Brassica carinata HOM05D004580 ORTHO05D005917 1.1e-159 567.0 373 73.7
MELO3C003564.2 Cucumis melo HOM05D004580 ORTHO05D005917 1.4e-159 566.6 338 79.0
CsaV3_3G047600 Cucumis sativus L. HOM05D004580 ORTHO05D005917 4.2e-159 565.1 373 73.7
Hund08631 Selenicereus undatus HOM05D004580 ORTHO05D005917 5.5e-159 564.7 396 67.4
PSO781G0322 Papaver somniferum HOM05D004580 ORTHO05D005917 1.2e-158 563.5 359 72.4
Sabra02G0077800 Salix brachista HOM05D004580 ORTHO05D005917 1.6e-158 563.1 389 72.0
Medtr4g053370 Medicago truncatula HOM05D004580 ORTHO05D005917 2.7e-158 562.4 348 77.6
Sed0008659 Sechium edule HOM05D004580 ORTHO05D005917 6.0e-158 561.2 327 79.5
DCAR_023183 Daucus carota HOM05D004580 ORTHO05D005917 1.8e-157 559.7 370 72.4
Ca_19393_v3 Cicer arietinum L. HOM05D004580 ORTHO05D005917 8.7e-157 557.4 373 72.9
DCAR_002598 Daucus carota HOM05D004580 ORTHO05D005917 2.5e-156 555.8 372 71.0
Oeu036766.1 Olea europaea HOM05D004580 ORTHO05D005917 4.3e-156 555.1 360 74.2
Nitab4.5_0000069g0120 Nicotiana tabacum HOM05D004580 ORTHO05D005917 7.4e-156 554.3 379 69.9
Glyma.11G184601 Glycine max HOM05D004580 ORTHO05D005917 1.6e-155 553.1 342 77.8
Nitab4.5_0013217g0010 Nicotiana tabacum HOM05D004580 ORTHO05D005917 2.1e-155 552.7 379 69.9
CDE05G3003 Ceratophyllum demersum HOM05D004580 ORTHO05D005917 4.8e-155 551.6 361 71.2
Lalb_Chr03g0028011 Lupinus albus HOM05D004580 ORTHO05D005917 1.1e-154 550.4 385 70.1
Psat7g188520 Pisum sativum HOM05D004580 ORTHO05D005917 9.0e-154 547.4 387 70.3
PSO541G6453 Papaver somniferum HOM05D004580 ORTHO05D005917 1.3e-152 543.5 359 70.8
PGSC0003DMG402016396 Solanum tuberosum HOM05D004580 ORTHO05D005917 3.8e-152 542.0 361 71.5
Rhsim09G0069400 Rhododendron simsii HOM05D004580 ORTHO05D005917 6.5e-152 541.2 379 70.2
ATR0706G027 Amborella trichopoda HOM05D004580 ORTHO05D005917 8.4e-152 540.8 335 77.9
MBI05_g34722_MAGBIO Magnolia biondii HOM05D004580 ORTHO05D005917 1.4e-151 540.0 383 68.1
Solyc01g008280.4 Solanum lycopersicum HOM05D004580 ORTHO05D005917 1.4e-151 540.0 363 71.3
CSS0011251 Camellia sinensis var. sinensis HOM05D004580 ORTHO05D005917 1.9e-151 539.7 309 81.9
Sopen01g003800 Solanum pennellii HOM05D004580 ORTHO05D005917 2.5e-151 539.3 363 71.3
Lj3g0026440 Lotus japonicus HOM05D004580 ORTHO05D005917 5.5e-151 538.1 348 73.3
MSTRG.2066 Avicennia marina HOM05D004580 ORTHO05D005917 7.2e-151 537.7 383 68.7
Ah.01g012710 Amaranthus hybridus HOM05D004580 ORTHO05D005917 1.2e-150 537.0 380 67.1
MSTRG.13678 Avicennia marina HOM05D004580 ORTHO05D005917 1.5e-148 530.0 382 67.3
AUR62017729 Chenopodium quinoa HOM05D004580 ORTHO05D005917 2.2e-147 526.2 374 66.8
Migut.E00684 Erythranthe guttata HOM05D004580 ORTHO05D005917 7.7e-145 517.7 358 68.7
HPP92_004278 Vanilla planifolia HOM05D004580 ORTHO05D005917 7.7e-145 517.7 384 66.9
SEGI_24357 Sequoiadendron giganteum HOM05D004580 ORTHO05D005917 4.2e-143 511.9 377 66.0
FvH4_5g29380 Fragaria vesca HOM05D004580 ORTHO05D005917 1.6e-142 510.0 342 73.4
Lj3P847T35 Lonicera japonica HOM05D004580 ORTHO05D005917 4.6e-142 508.4 306 77.8
SGA_v2.0_scaffold358G49840 Striga asiatica HOM05D004580 ORTHO05D005917 7.9e-142 507.7 361 66.8
EL10Ac9g22979 Beta vulgaris HOM05D004580 ORTHO05D005917 6.9e-138 494.6 345 67.8
MBI02_g02175_MAGBIO Magnolia biondii HOM05D004580 ORTHO05D005917 1.6e-134 483.4 352 67.0
AagrBONN_evm.TU.Sc2ySwM_117.2526 Anthoceros agrestis HOM05D004580 ORTHO05D005917 5.1e-133 478.4 381 62.5
SHI33348 Sapria himalayana HOM05D004580 ORTHO05D005917 9.7e-132 474.2 372 63.7
Zm00001eb372770 Zea mays HOM05D004580 ORTHO05D005917 1.1e-130 470.7 390 61.3
Peaxi162Scf00021g02317 Petunia axillaris HOM05D004580 ORTHO05D005917 4.5e-129 465.3 361 63.7
Os06g0219800 Oryza sativa ssp. japonica HOM05D004580 ORTHO05D005917 8.5e-128 461.1 392 59.7
Pp3c1_41950 Physcomitrium patens HOM05D004580 ORTHO05D005917 4.7e-126 455.3 347 63.4
Mapoly0004s0171 Marchantia polymorpha HOM05D004580 ORTHO05D005917 2.3e-125 453.0 344 63.7
Pp3c2_670 Physcomitrium patens HOM05D004580 ORTHO05D005917 3.0e-125 452.6 302 69.2
Gorai.009G235200 Gossypium raimondii HOM05D004580 ORTHO05D005917 4.0e-125 452.2 324 68.8
FAN18G2046 Fragaria x ananassa HOM05D004580 ORTHO05D005917 1.5e-124 450.3 285 75.4
Lalb_Chr19g0136591 Lupinus albus HOM05D004580 ORTHO05D005917 5.3e-122 441.8 382 58.6
HPP92_016361 Vanilla planifolia HOM05D004580 ORTHO05D005917 1.2e-118 430.6 385 58.4
Gohir.D05G227500 Gossypium hirsutum HOM05D004580 ORTHO05D005917 1.4e-117 427.2 231 84.0
SMO329G0013 Selaginella moellendorffii HOM05D004580 ORTHO05D005917 1.4e-114 417.2 328 60.1
TPR.G17228 Trifolium pratense HOM05D004580 ORTHO05D005917 1.3e-112 410.6 316 64.6
Gohir.A05G224950 Gossypium hirsutum HOM05D004580 ORTHO05D005917 2.9e-112 409.5 304 67.1
CBR_g45439 Chara braunii HOM05D004580 ORTHO05D005917 1.1e-111 407.5 346 57.8
FAN02G1810 Fragaria x ananassa HOM05D004580 ORTHO05D005917 3.0e-101 372.9 198 86.9
Glyma.12G087751 Glycine max HOM05D004580 ORTHO05D005917 1.5e-100 370.5 203 85.7
Aqoxy6G00748 Aquilegia oxysepala HOM05D004580 ORTHO05D005917 2.3e-96 356.7 232 75.4
unitig_8.g3592 Utricularia gibba HOM05D004580 ORTHO05D005917 3.1e-93 346.3 198 79.3
BraA09t38542Z Brassica rapa HOM05D004580 ORTHO05D005917 1.9e-90 337.0 219 73.1
A09p29790 Brassica napus HOM05D004580 ORTHO05D005917 3.9e-88 329.3 177 85.9
SEGI_19435 Sequoiadendron giganteum HOM05D004580 ORTHO05D005917 6.6e-88 328.6 255 61.6
CAN.G282.45 Capsicum annuum HOM05D004580 ORTHO05D005917 1.2e-84 317.8 231 66.2
CDE05G0498 Ceratophyllum demersum HOM05D004580 ORTHO05D005917 6.2e-78 295.4 230 60.4
FAN24G1342 Fragaria x ananassa HOM05D004580 ORTHO05D005917 2.3e-77 293.5 229 64.2
Cre13.g580650 Chlamydomonas reinhardtii HOM05D004580 ORTHO05D005917 1.1e-74 284.6 401 38.9
PRCOL_00005481 Prasinoderma coloniale HOM05D004580 ORTHO05D005917 7.8e-73 278.5 344 41.0
MCO01G633 Micromonas commoda HOM05D004580 ORTHO05D005917 1.7e-72 277.3 304 45.1
FvH4_2g11953 Fragaria vesca HOM05D004580 ORTHO05D000007 1.1e-69 268.1 221 61.1
Oeu013193.1 Olea europaea HOM05D004580 ORTHO05D005917 2.5e-63 246.9 195 62.6
Cfa021829 Carpinus fangiana HOM05D004580 ORTHO05D011646 6.4e-59 232.3 356 38.2
Cfa001645 Carpinus fangiana HOM05D004580 ORTHO05D020348 2.4e-50 203.8 348 35.6
GSVIVG01009057001 Vitis vinifera HOM05D004580 ORTHO05D005917 4.2e-50 203.0 125 78.4
Cfa014845 Carpinus fangiana HOM05D000016 ORTHO05D000725 1.9e-47 194.1 139 72.7
Nn5g29558 Nelumbo nucifera HOM05D004580 ORTHO05D005917 1.1e-37 161.8 117 70.1
FAN24G1075 Fragaria x ananassa HOM05D004580 ORTHO05D005917 5.9e-36 156.0 148 56.8
Nn3g16512 Nelumbo nucifera HOM05D004580 ORTHO05D005917 1.5e-23 114.8 66 77.3
FvH4_4g06652 Fragaria vesca HOM05D004580 ORTHO05D000031 5.0e-19 99.8 57 75.4
GSVIVG01001056001 Vitis vinifera HOM05D004580 ORTHO05D439289 1.2e-09 68.6 84 46.4
Nitab4.5_0006124g0020 Nicotiana tabacum HOM05D000011 ORTHO05D036898 8.2e-06 55.8 43 65.1


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