Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013637 Carpinus fangiana HOM05D007557 ORTHO05D009573 3.4e-53 211.5 110 100.0
CiPaw.07G179800 Carya illinoinensis HOM05D007557 ORTHO05D009573 2.1e-39 165.6 110 72.7
QL12p036790 Quercus lobata HOM05D007557 ORTHO05D009573 1.2e-37 159.8 110 73.6
Prupe.1G517300 Prunus persica HOM05D007557 ORTHO05D009573 1.7e-36 156.0 111 70.3
MD15G1369400 Malus domestica HOM05D007557 ORTHO05D009573 1.1e-35 153.3 111 71.2
MD08G1183000 Malus domestica HOM05D007557 ORTHO05D009573 1.9e-35 152.5 111 70.3
Prupe.1G519000 Prunus persica HOM05D007557 ORTHO05D009573 5.4e-35 151.0 111 69.4
Cpa.g.sc36.133 Carica papaya HOM05D007557 ORTHO05D009573 2.7e-34 148.7 110 65.5
Haze_22270 Corylus avellana HOM05D007557 ORTHO05D009573 1.0e-33 146.7 109 73.4
FAN08G0381 Fragaria x ananassa HOM05D007557 ORTHO05D009573 3.9e-33 144.8 112 65.2
Duzib041G0047 Durio zibethinus HOM05D007557 ORTHO05D009573 1.9e-32 142.5 110 61.8
RcHm_v2.0_Chr7g0238961 Rosa chinensis HOM05D007557 ORTHO05D009573 1.9e-32 142.5 112 65.2
FvH4_5g37320 Fragaria vesca HOM05D007557 ORTHO05D009573 5.6e-32 141.0 112 63.4
FAN18G1226 Fragaria x ananassa HOM05D007557 ORTHO05D009573 5.6e-32 141.0 112 63.4
FAN04G0616 Fragaria x ananassa HOM05D007557 ORTHO05D009573 1.6e-31 139.4 111 62.2
TWI12G0426 Tripterygium wilfordii HOM05D007557 ORTHO05D009573 2.1e-31 139.0 110 61.8
Duzib093G0460 Durio zibethinus HOM05D007557 ORTHO05D009573 2.8e-31 138.7 110 61.8
TAR625G0198 Trochodendron aralioides HOM05D007557 ORTHO05D009573 3.6e-31 138.3 110 56.4
CANSAT25G0704 Cannabis sativa HOM05D007557 ORTHO05D009573 8.1e-31 137.1 111 64.0
Duzib093G1199 Durio zibethinus HOM05D007557 ORTHO05D009573 8.1e-31 137.1 110 61.8
Eucgr.F00324 Eucalyptus grandis HOM05D007557 ORTHO05D009573 8.1e-31 137.1 110 61.8
Sed0005506 Sechium edule HOM05D007557 ORTHO05D009573 8.1e-31 137.1 111 63.1
ClCG11G014080 Citrullus lanatus HOM05D007557 ORTHO05D009573 1.1e-30 136.7 111 62.2
Duzib116G0255 Durio zibethinus HOM05D007557 ORTHO05D009573 2.3e-30 135.6 110 59.1
MELO3C003576.2 Cucumis melo HOM05D007557 ORTHO05D009573 3.1e-30 135.2 111 62.2
COL.COLO4_16396 Corchorus olitorius HOM05D007557 ORTHO05D009573 5.2e-30 134.4 111 60.4
Glyma.04G102200 Glycine max HOM05D007557 ORTHO05D009573 5.2e-30 134.4 112 65.2
Lj1g0024074 Lotus japonicus HOM05D007557 ORTHO05D009573 1.5e-29 132.9 110 62.7
Gohir.A05G267100 Gossypium hirsutum HOM05D007557 ORTHO05D009573 3.4e-29 131.7 110 54.5
Thecc.08G106600 Theobroma cacao HOM05D007557 ORTHO05D009573 3.4e-29 131.7 111 57.7
Glyma.06G103500 Glycine max HOM05D007557 ORTHO05D009573 7.5e-29 130.6 112 64.3
Gorai.009G281300 Gossypium raimondii HOM05D007557 ORTHO05D009573 7.5e-29 130.6 110 54.5
Lalb_Chr23g0270571 Lupinus albus HOM05D007557 ORTHO05D009573 7.5e-29 130.6 106 60.4
Phvul.009G031100 Phaseolus vulgaris HOM05D007557 ORTHO05D009573 7.5e-29 130.6 111 63.1
BcaB03g13675 Brassica carinata HOM05D007557 ORTHO05D009573 9.9e-29 130.2 110 55.5
Aqoxy6G00779 Aquilegia oxysepala HOM05D007557 ORTHO05D009573 1.3e-28 129.8 107 57.9
VMungo1309G0845 Vigna mungo HOM05D007557 ORTHO05D009573 2.9e-28 128.6 111 63.1
arahy.Tifrunner.gnm1.ann1.JHL0SX Arachis hypogaea HOM05D007557 ORTHO05D009573 4.9e-28 127.9 110 57.3
PSO447G0314 Papaver somniferum HOM05D007557 ORTHO05D009573 8.3e-28 127.1 110 58.2
TPR.G34528 Trifolium pratense HOM05D007557 ORTHO05D009573 8.3e-28 127.1 111 57.7
arahy.Tifrunner.gnm1.ann1.VD5D9J Arachis hypogaea HOM05D007557 ORTHO05D009573 1.1e-27 126.7 110 57.3
BraA05t21266Z Brassica rapa HOM05D007557 ORTHO05D009573 1.1e-27 126.7 111 55.9
Sp1g29760 Schrenkiella parvula HOM05D007557 ORTHO05D009573 1.1e-27 126.7 110 54.5
Atru.chr13.1185 Acer truncatum HOM05D007557 ORTHO05D009573 1.9e-27 125.9 110 56.4
Hund16904 Selenicereus undatus HOM05D007557 ORTHO05D009573 2.4e-27 125.6 108 57.4
AT1G34640 Arabidopsis thaliana HOM05D007557 ORTHO05D009573 3.2e-27 125.2 109 54.1
BcaC05g27757 Brassica carinata HOM05D007557 ORTHO05D009573 3.2e-27 125.2 110 53.6
Gohir.D05G268700 Gossypium hirsutum HOM05D007557 ORTHO05D009573 3.2e-27 125.2 110 53.6
PSO210G0208 Papaver somniferum HOM05D007557 ORTHO05D009573 3.2e-27 125.2 110 56.4
Thhalv10001839m.g Eutrema salsugineum HOM05D007557 ORTHO05D009573 9.2e-27 123.6 111 55.9
Hund26963 Selenicereus undatus HOM05D007557 ORTHO05D009573 9.2e-27 123.6 110 55.5
THA.LOC104816752 Tarenaya hassleriana HOM05D007557 ORTHO05D009573 9.2e-27 123.6 110 52.7
CDE06G2682 Ceratophyllum demersum HOM05D007557 ORTHO05D009573 1.2e-26 123.2 107 54.2
Manes.02G152600 Manihot esculenta HOM05D007557 ORTHO05D009573 1.2e-26 123.2 111 63.1
CARHR033940 Cardamine hirsuta HOM05D007557 ORTHO05D009573 2.7e-26 122.1 109 52.3
Carub.0001s3264 Capsella rubella HOM05D007557 ORTHO05D009573 3.5e-26 121.7 109 53.2
Dinv44776 Davidia involucrata HOM05D007557 ORTHO05D009573 3.5e-26 121.7 110 50.9
C05p37510 Brassica napus HOM05D007557 ORTHO05D009573 4.6e-26 121.3 111 53.2
BolC5t32491H Brassica oleracea HOM05D007557 ORTHO05D009573 4.6e-26 121.3 111 53.2
Cc10_g07180 Coffea canephora HOM05D007557 ORTHO05D009573 1.0e-25 120.2 112 52.7
Medtr3g074500 Medicago truncatula HOM05D007557 ORTHO05D009573 1.0e-25 120.2 105 58.1
Potri.002G096700 Populus trichocarpa HOM05D007557 ORTHO05D009573 1.3e-25 119.8 110 57.3
CDE03G0188 Ceratophyllum demersum HOM05D007557 ORTHO05D009573 5.1e-25 117.9 107 51.4
Nn1g05358 Nelumbo nucifera HOM05D007557 ORTHO05D009573 8.6e-25 117.1 111 53.2
DCAR_012735 Daucus carota HOM05D007557 ORTHO05D009573 3.3e-24 115.2 114 51.8
A05p23900 Brassica napus HOM05D007557 ORTHO05D009573 9.5e-24 113.6 101 54.5
Ah.05g169950 Amaranthus hybridus HOM05D007557 ORTHO05D009573 1.2e-23 113.2 110 50.9
Psat5g138560 Pisum sativum HOM05D007557 ORTHO05D009573 1.2e-23 113.2 108 52.8
Psat5g138640 Pisum sativum HOM05D007557 ORTHO05D009573 1.2e-23 113.2 108 52.8
HanXRQChr05g0162891 Helianthus annuus HOM05D007557 ORTHO05D009573 1.6e-23 112.8 109 47.7
MBI05_g37049_MAGBIO Magnolia biondii HOM05D007557 ORTHO05D009573 4.7e-23 111.3 109 48.6
Actinidia30774 Actinidia chinensis HOM05D007557 ORTHO05D009573 2.4e-22 109.0 110 50.9
Ciclev10003485m.g Citrus clementina HOM05D007557 ORTHO05D009573 2.4e-22 109.0 77 64.9
Lsat_1_v5_gn_6_103041 Lactuca sativa HOM05D007557 ORTHO05D009573 3.1e-22 108.6 111 49.5
vmacro21268 Vaccinium macrocarpon HOM05D007557 ORTHO05D009573 3.1e-22 108.6 111 45.9
HPP92_005842 Vanilla planifolia HOM05D007557 ORTHO05D009573 4.0e-22 108.2 110 47.3
Nitab4.5_0000232g0140 Nicotiana tabacum HOM05D007557 ORTHO05D009573 5.2e-22 107.8 109 45.0
Lj4A102T59 Lonicera japonica HOM05D007557 ORTHO05D009573 1.2e-21 106.7 112 48.2
Rhsim06G0081800 Rhododendron simsii HOM05D007557 ORTHO05D009573 3.4e-21 105.1 117 45.3
PGR042G1134 Punica granatum HOM05D007557 ORTHO05D009573 5.8e-21 104.4 85 61.2
Sc26g0000100 Simmondsia chinensis HOM05D007557 ORTHO05D009573 5.8e-21 104.4 108 45.4
Nitab4.5_0003631g0020 Nicotiana tabacum HOM05D007557 ORTHO05D009573 1.7e-20 102.8 107 43.0
CsaV3_3G047480 Cucumis sativus L. HOM05D007557 ORTHO05D009573 2.9e-20 102.1 69 71.0
Os07g0622900 Oryza sativa ssp. japonica HOM05D007557 ORTHO05D009573 4.9e-20 101.3 113 45.1
Zm00001eb327820 Zea mays HOM05D007557 ORTHO05D009573 4.9e-20 101.3 113 44.2
Solyc12g057030.2 Solanum lycopersicum HOM05D007557 ORTHO05D009573 9.2e-19 97.1 101 46.5
Migut.N02896 Erythranthe guttata HOM05D007557 ORTHO05D009573 3.0e-17 92.0 109 42.2
PGSC0003DMG400008555 Solanum tuberosum HOM05D007557 ORTHO05D009573 6.6e-17 90.9 99 42.4
EL10Ac1g01212 Beta vulgaris HOM05D007557 ORTHO05D009573 9.6e-16 87.0 81 50.6
Aa31LG6G8510 Aethionema arabicum HOM05D007557 ORTHO05D009573 2.8e-15 85.5 81 51.9
AUR62027760 Chenopodium quinoa HOM05D007557 ORTHO05D009573 2.8e-15 85.5 81 49.4
CAN.G222.163 Capsicum annuum HOM05D007557 ORTHO05D009573 4.7e-15 84.7 103 40.8
Nn5g30104 Nelumbo nucifera HOM05D007557 ORTHO05D009573 1.5e-13 79.7 66 53.0
Sopen12g029690 Solanum pennellii HOM05D007557 ORTHO05D009573 5.8e-13 77.8 79 44.3
Zm00001eb109640 Zea mays HOM05D007557 ORTHO05D009573 7.6e-13 77.4 74 47.3
SEGI_01546 Sequoiadendron giganteum HOM05D007557 ORTHO05D009573 2.8e-07 58.9 114 33.3
Peaxi162Scf00160g01332 Petunia axillaris HOM05D007557 ORTHO05D009573 4.8e-07 58.2 56 51.8
Peaxi162Scf69669g00006 Petunia axillaris HOM05D007557 ORTHO05D009573 4.8e-07 58.2 56 51.8


User provided reference genes

Program Settings