Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013607 Carpinus fangiana HOM05D061556 ORTHO05D124976 2.0e-33 145.2 73 100.0
Cfa018493 Carpinus fangiana HOM05D061556 ORTHO05D126046 3.7e-32 141.0 73 97.3
Haze_15981 Corylus avellana HOM05D000156 ORTHO05D001290 9.5e-20 99.8 63 77.8
Cfa003564 Carpinus fangiana HOM05D000521 ORTHO05D000384 7.8e-14 80.1 95 51.6
CiPaw.01G223300 Carya illinoinensis HOM05D000156 ORTHO05D001290 1.9e-12 75.5 64 65.6
Atru.chr1.3783 Acer truncatum HOM05D000156 ORTHO05D001290 2.6e-09 65.1 60 56.7
Prupe.3G046800 Prunus persica HOM05D000156 ORTHO05D001290 3.4e-09 64.7 59 57.6
Ciclev10027246m.g Citrus clementina HOM05D000521 ORTHO05D000384 9.8e-09 63.2 61 55.7
Phvul.010G137400 Phaseolus vulgaris HOM05D000156 ORTHO05D001290 1.7e-08 62.4 46 58.7
Sed0017301 Sechium edule HOM05D000285 ORTHO05D001290 1.7e-08 62.4 42 69.0
Gohir.A05G407300 Gossypium hirsutum HOM05D000156 ORTHO05D001290 3.7e-08 61.2 65 55.4
Gohir.D04G008300 Gossypium hirsutum HOM05D000156 ORTHO05D001290 3.7e-08 61.2 65 55.4
Gorai.012G010000 Gossypium raimondii HOM05D000156 ORTHO05D001290 3.7e-08 61.2 65 55.4
Glyma.07G008400 Glycine max HOM05D000156 ORTHO05D001290 1.1e-07 59.7 53 50.9
ClCG09G000770 Citrullus lanatus HOM05D000156 ORTHO05D001290 1.4e-07 59.3 42 66.7
QL05p010081 Quercus lobata HOM05D000156 ORTHO05D001290 1.4e-07 59.3 67 58.2
MD09G1190900 Malus domestica HOM05D000156 ORTHO05D001290 1.9e-07 58.9 75 46.7
VMungo0331G1259 Vigna mungo HOM05D000156 ORTHO05D001290 1.9e-07 58.9 46 54.3
Cpa.g.sc25.70 Carica papaya HOM05D000156 ORTHO05D001290 4.1e-07 57.8 72 50.0
Thecc.06G114000 Theobroma cacao HOM05D000156 ORTHO05D001290 5.4e-07 57.4 42 69.0
Hund20826 Selenicereus undatus HOM05D000156 ORTHO05D001290 7.0e-07 57.0 72 43.1
MELO3C024381.2 Cucumis melo HOM05D000156 ORTHO05D001290 9.2e-07 56.6 42 64.3
Manes.04G140900 Manihot esculenta HOM05D000156 ORTHO05D001290 1.2e-06 56.2 64 51.6
RcHm_v2.0_Chr2g0143711 Rosa chinensis HOM05D000156 ORTHO05D001290 2.7e-06 55.1 43 62.8
Potri.003G042700 Populus trichocarpa HOM05D000156 ORTHO05D001290 4.6e-06 54.3 75 44.0
CsaV3_7G034710 Cucumis sativus L. HOM05D000156 ORTHO05D001290 6.0e-06 53.9 64 45.3
Duzib235G1491 Durio zibethinus HOM05D000156 ORTHO05D001290 7.8e-06 53.5 72 45.8
FAN05G1810 Fragaria x ananassa HOM05D000156 ORTHO05D001290 7.8e-06 53.5 41 63.4
Glyma.08G191400 Glycine max HOM05D000156 ORTHO05D001290 7.8e-06 53.5 46 47.8


User provided reference genes

Program Settings