Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013552 Carpinus fangiana HOM05D010128 ORTHO05D010651 3.1e-83 312.0 188 100.0
QL02p095556 Quercus lobata HOM05D010128 ORTHO05D010651 6.6e-33 144.8 177 61.0
Haze_22173 Corylus avellana HOM05D010128 ORTHO05D010651 3.2e-27 125.9 98 91.8
CiPaw.07G186300 Carya illinoinensis HOM05D020211 ORTHO05D010651 1.7e-25 120.2 146 63.7
Prupe.1G097900 Prunus persica HOM05D010128 ORTHO05D010651 1.8e-22 110.2 194 39.2
Atru.chr7.481 Acer truncatum HOM05D020161 ORTHO05D026266 4.4e-21 105.5 191 50.3
RcHm_v2.0_Chr4g0404981 Rosa chinensis HOM05D021120 ORTHO05D010651 1.0e-17 94.4 196 36.2
vmacro13058 Vaccinium macrocarpon HOM05D010128 ORTHO05D010651 6.6e-17 91.7 204 35.3
Eucgr.C00213 Eucalyptus grandis HOM05D013619 ORTHO05D010651 4.3e-16 89.0 195 42.1
Manes.14G147800 Manihot esculenta HOM05D010128 ORTHO05D010651 6.2e-15 85.1 200 45.0
Rhsim01G0012600 Rhododendron simsii HOM05D010128 ORTHO05D010651 3.1e-14 82.8 202 32.7
Glyma.13G091300 Glycine max HOM05D013619 ORTHO05D010651 4.0e-14 82.4 189 34.9
MD16G1262100 Malus domestica HOM05D010128 ORTHO05D010651 2.0e-13 80.1 171 33.9
Dinv42788 Davidia involucrata HOM05D020211 ORTHO05D010651 2.6e-13 79.7 173 35.8
Dinv43313 Davidia involucrata HOM05D020211 ORTHO05D010651 2.6e-13 79.7 173 35.8
Lj4g0027931 Lotus japonicus HOM05D013619 ORTHO05D010651 3.2e-11 72.8 190 35.3
Ca_21171_v3 Cicer arietinum L. HOM05D013619 ORTHO05D010651 4.2e-11 72.4 188 32.4
TPR.G5347 Trifolium pratense HOM05D013619 ORTHO05D010651 4.2e-11 72.4 185 38.4
Psat4g010360 Pisum sativum HOM05D013619 ORTHO05D010651 1.6e-10 70.5 185 33.0
CiPaw.08G040600 Carya illinoinensis HOM05D021120 ORTHO05D010651 1.0e-09 67.8 62 59.7
FvH4_2g31360 Fragaria vesca HOM05D021120 ORTHO05D010651 3.0e-09 66.2 176 46.0
FAN24G2479 Fragaria x ananassa HOM05D021120 ORTHO05D010651 3.0e-09 66.2 176 46.0
Phvul.003G151500 Phaseolus vulgaris HOM05D013619 ORTHO05D010651 3.0e-09 66.2 189 42.9
FAN15G2502 Fragaria x ananassa HOM05D021120 ORTHO05D010651 5.1e-09 65.5 183 46.4
TWI63G0720 Tripterygium wilfordii HOM05D010128 ORTHO05D010651 5.1e-09 65.5 222 24.3
Medtr4g129620 Medicago truncatula HOM05D013619 ORTHO05D010651 1.5e-08 63.9 173 31.2
Potri.006G177250 Populus trichocarpa HOM05D010128 ORTHO05D010651 1.5e-08 63.9 162 32.1
FAN27G0221 Fragaria x ananassa HOM05D021120 ORTHO05D010651 1.9e-08 63.5 176 45.5
Hma1.2p1_0156F.1_g068710 Hydrangea macrophylla HOM05D010128 ORTHO05D010651 2.5e-08 63.2 192 28.6
Hma1.2p1_1495F.1_g287015 Hydrangea macrophylla HOM05D010128 ORTHO05D010651 2.5e-08 63.2 192 28.6
Lalb_Chr13g0300561 Lupinus albus HOM05D013619 ORTHO05D010651 4.3e-08 62.4 184 36.4
Actinidia20953 Actinidia chinensis HOM05D010128 ORTHO05D010651 9.6e-08 61.2 73 53.4
Nn2g12550 Nelumbo nucifera HOM05D010128 ORTHO05D034267 1.6e-07 60.5 43 67.4
TAR625G0749 Trochodendron aralioides HOM05D020211 ORTHO05D010651 8.1e-07 58.2 46 63.0
Potri.018G099301 Populus trichocarpa HOM05D010128 ORTHO05D010651 1.4e-06 57.4 163 29.4
GSVIVG01023741001 Vitis vinifera HOM05D020211 ORTHO05D010651 3.1e-06 56.2 187 39.0
Sabra18G0085800 Salix brachista HOM05D010128 ORTHO05D010651 6.9e-06 55.1 69 52.2
FAN20G0495 Fragaria x ananassa HOM05D000448 ORTHO05D000291 9.0e-06 54.7 177 44.6


User provided reference genes

Program Settings