Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 1.6e-177 625.9 308 100.0
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 1.0e-171 606.7 319 95.0
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 1.6e-137 493.0 295 82.7
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 3.6e-137 491.9 296 81.8
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 7.1e-125 451.1 295 75.6
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 1.0e-123 447.2 287 74.9
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 1.7e-123 446.4 300 73.7
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 8.6e-123 444.1 296 73.3
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 8.6e-123 444.1 284 76.1
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 2.5e-122 442.6 295 73.6
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 8.1e-121 437.6 296 72.3
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 2.6e-119 432.6 292 72.6
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 2.9e-118 429.1 284 73.9
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 6.4e-118 427.9 300 70.7
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 8.4e-118 427.6 284 74.3
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 8.4e-118 427.6 300 70.7
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 4.1e-117 425.2 284 73.9
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 4.1e-117 425.2 296 69.6
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 7.1e-117 424.5 296 69.3
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 9.2e-117 424.1 292 72.6
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 2.1e-116 422.9 303 69.3
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 1.0e-115 420.6 283 71.0
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.0e-115 420.6 296 68.9
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 6.6e-115 417.9 296 68.6
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 8.7e-115 417.5 296 69.3
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 8.7e-115 417.5 283 71.7
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 1.5e-114 416.8 283 70.7
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 7.3e-114 414.5 284 71.1
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 1.2e-113 413.7 295 68.8
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 1.6e-113 413.3 293 68.6
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 2.8e-113 412.5 285 69.8
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 2.8e-113 412.5 284 71.8
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 4.7e-113 411.8 290 70.7
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 4.0e-112 408.7 283 71.0
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 6.9e-112 407.9 283 69.6
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.2e-111 407.1 303 67.7
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 2.0e-111 406.4 297 67.3
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 2.0e-111 406.4 283 69.3
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 7.6e-111 404.4 319 63.9
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 1.1e-109 400.6 299 67.6
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 7.1e-109 397.9 235 81.7
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 2.3e-107 392.9 296 67.9
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 3.0e-107 392.5 297 65.7
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 6.6e-107 391.3 301 65.4
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 8.7e-107 391.0 296 66.9
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 1.6e-105 386.7 288 66.3
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 3.6e-105 385.6 315 63.5
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 1.4e-104 383.6 286 64.7
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 1.4e-104 383.6 283 67.5
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 1.8e-104 383.3 288 66.3
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 4.0e-104 382.1 304 64.1
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 9.0e-104 380.9 287 64.8
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 9.0e-104 380.9 282 67.4
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 2.0e-103 379.8 298 64.1
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 2.0e-103 379.8 293 64.5
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 3.4e-103 379.0 288 66.0
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 7.6e-103 377.9 283 66.4
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 9.9e-103 377.5 272 68.4
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 1.3e-102 377.1 283 65.7
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 8.4e-102 374.4 283 65.0
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 3.2e-101 372.5 282 64.5
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 5.4e-101 371.7 283 65.4
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 7.1e-101 371.3 283 65.4
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 7.1e-101 371.3 283 66.1
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 7.1e-101 371.3 296 61.5
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 1.6e-100 370.2 283 66.1
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 2.1e-100 369.8 283 64.0
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 2.7e-100 369.4 283 65.0
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 2.7e-100 369.4 294 63.9
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 1.0e-99 367.5 283 64.3
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 1.3e-99 367.1 283 65.4
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 1.3e-99 367.1 289 64.0
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 2.3e-99 366.3 289 63.7
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 2.3e-99 366.3 289 63.3
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 3.0e-99 365.9 290 63.4
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 3.0e-99 365.9 287 63.8
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 3.0e-99 365.9 283 64.3
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 3.0e-99 365.9 301 61.8
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 6.7e-99 364.8 291 62.2
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 1.1e-98 364.0 291 62.2
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 1.5e-98 363.6 283 64.7
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 1.9e-98 363.2 283 63.6
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 3.3e-98 362.5 293 62.1
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 2.1e-97 359.8 283 63.3
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 4.5e-95 352.1 287 61.7
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 4.5e-95 352.1 290 60.7
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 1.3e-91 340.5 308 56.8
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 3.0e-91 339.3 296 60.1
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 2.5e-85 319.7 288 55.9
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 4.2e-85 318.9 295 54.9
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 1.6e-84 317.0 298 56.7
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 1.3e-83 313.9 179 80.4
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 1.1e-82 310.8 316 50.9
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 1.1e-82 310.8 315 52.1
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 2.5e-82 309.7 182 76.9
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.1e-80 302.8 192 73.4
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 6.9e-80 301.6 192 72.9
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 2.0e-79 300.1 169 83.4
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 1.0e-78 297.7 256 55.1
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 2.9e-78 296.2 171 78.9
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 5.0e-78 295.4 295 52.5
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 2.7e-76 289.7 298 55.0
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 3.9e-75 285.8 288 51.4
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 2.0e-74 283.5 154 81.8
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 1.5e-71 273.9 154 81.8
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 2.6e-63 246.5 285 49.5
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 1.2e-55 221.1 221 52.5
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.9e-45 187.2 111 72.1
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 7.2e-45 185.3 110 80.0
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 1.1e-40 171.4 248 40.7
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 1.2e-39 167.9 227 43.2
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 5.0e-38 162.5 140 60.0
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 2.8e-36 156.8 182 49.5
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 4.4e-34 149.4 180 48.3
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 1.1e-24 118.2 108 60.2
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 1.6e-23 114.4 71 78.9
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 6.2e-12 75.9 55 63.6
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 1.8e-11 74.3 67 53.7


User provided reference genes

Program Settings