Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 3.3e-195 684.9 352 100.0
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 3.2e-182 641.7 354 94.1
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 2.7e-136 489.2 358 73.7
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 5.4e-121 438.3 365 69.0
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 2.1e-112 409.8 401 57.4
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 1.9e-102 376.7 402 53.2
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 1.6e-101 373.6 385 57.4
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.5e-99 367.1 372 58.6
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 2.0e-99 366.7 381 57.0
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 4.5e-99 365.5 372 57.8
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 5.8e-99 365.2 371 57.4
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 8.4e-98 361.3 371 57.4
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 1.6e-96 357.1 445 50.6
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 1.3e-95 354.0 408 52.7
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 5.6e-94 348.6 376 56.9
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 2.8e-93 346.3 231 79.2
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 6.2e-93 345.1 373 56.0
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 1.5e-91 340.5 353 56.7
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 8.4e-90 334.7 370 55.1
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 3.2e-89 332.8 353 55.2
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 3.2e-89 332.8 305 63.0
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 2.7e-88 329.7 371 53.6
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 1.0e-87 327.8 299 62.5
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 8.7e-87 324.7 362 55.2
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 1.1e-86 324.3 394 49.5
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 4.3e-86 322.4 363 55.6
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 4.3e-86 322.4 379 53.0
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 6.3e-85 318.5 301 60.8
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.1e-84 317.8 307 61.2
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 1.4e-84 317.4 299 58.2
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 1.4e-84 317.4 385 49.6
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 1.8e-84 317.0 357 55.7
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 4.1e-84 315.8 386 50.0
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 9.0e-84 314.7 390 49.7
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 4.5e-83 312.4 234 68.8
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 4.5e-83 312.4 249 66.7
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 1.0e-82 311.2 301 57.5
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 1.7e-82 310.5 384 50.0
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 1.7e-82 310.5 290 60.0
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 2.2e-82 310.1 368 53.8
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 2.2e-82 310.1 304 58.6
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 1.9e-81 307.0 234 70.5
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 5.5e-81 305.4 373 52.8
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 9.3e-81 304.7 308 58.1
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 1.2e-80 304.3 242 68.2
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.6e-80 303.9 295 59.3
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 2.7e-80 303.1 364 50.5
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.6e-80 302.4 287 60.3
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.1e-80 302.0 254 65.7
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 1.8e-79 300.4 360 48.6
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 8.7e-79 298.1 364 50.3
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.1e-78 297.7 254 65.4
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 1.1e-78 297.7 371 50.1
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 5.7e-78 295.4 223 70.4
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 5.7e-78 295.4 319 55.5
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 6.3e-77 292.0 285 60.0
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 8.2e-77 291.6 228 69.7
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 1.1e-76 291.2 362 53.0
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 1.4e-76 290.8 247 61.9
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 1.8e-76 290.4 230 67.8
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 3.1e-76 289.7 296 58.1
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 5.3e-76 288.9 252 64.7
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 1.2e-75 287.7 301 55.8
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 2.0e-75 287.0 361 52.4
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 1.3e-74 284.3 286 57.3
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 1.3e-74 284.3 349 49.9
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 1.2e-72 277.7 355 49.0
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 2.3e-71 273.5 402 45.8
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 4.3e-70 269.2 291 56.7
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 7.4e-70 268.5 233 63.1
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 4.8e-69 265.8 235 60.0
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 3.1e-68 263.1 286 56.6
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 6.9e-68 261.9 354 45.8
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 1.2e-67 261.2 266 56.4
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 2.0e-67 260.4 226 63.7
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 5.9e-67 258.8 242 60.7
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 2.9e-66 256.5 279 52.0
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 3.8e-66 256.1 291 52.6
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 6.5e-66 255.4 279 51.6
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 8.5e-66 255.0 190 70.0
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 8.5e-66 255.0 220 59.5
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 4.2e-65 252.7 284 52.8
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 2.1e-64 250.4 257 58.8
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 4.7e-64 249.2 232 60.8
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 4.7e-64 249.2 232 60.8
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 6.1e-64 248.8 238 60.5
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 1.0e-63 248.1 218 62.8
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 1.0e-63 248.1 271 55.4
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 1.4e-63 247.7 218 62.4
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 1.8e-63 247.3 251 56.6
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 2.3e-63 246.9 218 62.8
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 5.1e-63 245.7 209 66.0
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 5.1e-63 245.7 232 59.9
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 9.7e-62 241.5 215 63.7
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 3.2e-57 226.5 322 45.7
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 1.2e-56 224.6 137 82.5
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 8.8e-55 218.4 194 61.9
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.5e-54 217.6 169 70.4
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 7.0e-52 208.8 338 39.6
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.6e-51 207.6 155 71.6
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.0e-50 204.9 218 55.0
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 3.8e-50 203.0 315 46.0
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 4.2e-49 199.5 188 60.1
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 6.8e-47 192.2 178 62.4
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 1.6e-40 171.0 178 56.2
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 2.3e-39 167.2 191 50.8
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 5.9e-35 152.5 226 40.3
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.3e-34 151.4 149 59.1
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 2.5e-33 147.1 179 55.3
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 6.1e-32 142.5 178 53.9
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 1.0e-31 141.7 101 70.3
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 1.4e-31 141.4 252 40.5
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 1.0e-23 115.2 194 35.1
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 3.2e-20 103.6 61 82.0
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 1.2e-19 101.7 174 34.5
Haze_22077 Corylus avellana HOM05D006410 ORTHO05D007914 1.3e-18 98.2 69 73.9
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 2.6e-14 84.0 55 76.4
Lsat_1_v5_gn_8_97960 Lactuca sativa HOM05D006410 ORTHO05D007914 2.9e-13 80.5 56 73.2
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 1.1e-12 78.6 205 33.2
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 4.1e-12 76.6 210 33.8
Cre17.g738200 Chlamydomonas reinhardtii HOM05D006410 ORTHO05D007914 2.5e-09 67.4 182 30.2
Oeu030096.1 Olea europaea HOM05D006410 ORTHO05D007914 2.1e-08 64.3 38 81.6
Eucgr.E03158 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.0e-07 60.1 96 44.8


User provided reference genes

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