Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013482 Carpinus fangiana HOM05D007669 ORTHO05D009624 0.0e+00 1599.7 799 100.0
QL11p009976 Quercus lobata HOM05D007669 ORTHO05D009624 0.0e+00 1090.5 911 64.2
Dinv25484 Davidia involucrata HOM05D007669 ORTHO05D009624 7.9e-269 930.6 802 61.1
GSVIVG01029262001 Vitis vinifera HOM05D007669 ORTHO05D009624 2.9e-263 912.1 783 59.4
TWI34G1867 Tripterygium wilfordii HOM05D007669 ORTHO05D009624 1.4e-257 893.3 776 59.7
Manes.14G174400 Manihot esculenta HOM05D007669 ORTHO05D009624 4.2e-254 881.7 793 57.6
Potri.018G133300 Populus trichocarpa HOM05D007669 ORTHO05D009624 1.1e-251 873.6 743 59.0
Sabra18G0113000 Salix brachista HOM05D007669 ORTHO05D009624 2.2e-250 869.4 750 58.3
Ciclev10007518m.g Citrus clementina HOM05D007669 ORTHO05D009624 1.7e-247 859.8 753 58.3
CiPaw.08G030700 Carya illinoinensis HOM05D007669 ORTHO05D009624 1.9e-246 856.3 588 75.2
MD13G1236300 Malus domestica HOM05D007669 ORTHO05D009624 2.5e-238 829.3 773 55.6
RcHm_v2.0_Chr4g0398451 Rosa chinensis HOM05D007669 ORTHO05D009624 6.1e-237 824.7 774 54.3
FAN07G2841 Fragaria x ananassa HOM05D007669 ORTHO05D009624 2.9e-231 805.8 772 53.5
Lj4g0015120 Lotus japonicus HOM05D007669 ORTHO05D009624 1.5e-230 803.5 776 54.1
FAN17G0559 Fragaria x ananassa HOM05D007669 ORTHO05D009624 2.1e-229 799.7 772 53.4
Sed0018351 Sechium edule HOM05D007669 ORTHO05D009624 5.5e-222 775.0 750 53.9
Duzib177G0349 Durio zibethinus HOM05D007669 ORTHO05D009624 7.2e-222 774.6 758 53.7
Prupe.1G068100 Prunus persica HOM05D007669 ORTHO05D009624 9.4e-222 774.2 604 62.6
ClCG06G013870 Citrullus lanatus HOM05D007669 ORTHO05D009624 1.0e-220 770.8 755 53.2
Gohir.A05G248100 Gossypium hirsutum HOM05D007669 ORTHO05D009624 1.4e-220 770.4 739 53.2
Gohir.D05G246300 Gossypium hirsutum HOM05D007669 ORTHO05D009624 2.3e-220 769.6 742 53.0
Gorai.009G262500 Gossypium raimondii HOM05D007669 ORTHO05D009624 1.5e-219 766.9 742 52.7
CANSAT11G2077 Cannabis sativa HOM05D007669 ORTHO05D009624 1.3e-218 763.8 794 53.4
PGR044G0001 Punica granatum HOM05D007669 ORTHO05D009624 2.8e-218 762.7 782 51.9
arahy.Tifrunner.gnm1.ann1.YI9GDS Arachis hypogaea HOM05D007669 ORTHO05D009624 4.9e-218 761.9 760 52.2
Lalb_Chr07g0180781 Lupinus albus HOM05D007669 ORTHO05D009624 4.9e-218 761.9 783 53.0
arahy.Tifrunner.gnm1.ann1.BQQL35 Arachis hypogaea HOM05D007669 ORTHO05D009624 2.7e-216 756.1 764 51.6
Rhsim01G0007900 Rhododendron simsii HOM05D007669 ORTHO05D009624 1.0e-215 754.2 840 50.7
TPR.G5403 Trifolium pratense HOM05D007669 ORTHO05D009624 2.9e-215 752.7 767 52.2
Phvul.003G138500 Phaseolus vulgaris HOM05D007669 ORTHO05D009624 3.8e-215 752.3 785 51.8
Medtr4g126780 Medicago truncatula HOM05D007669 ORTHO05D009624 2.5e-214 749.6 760 52.0
Ca_21270_v3 Cicer arietinum L. HOM05D007669 ORTHO05D009624 2.3e-207 726.5 860 47.0
FAN22G2123 Fragaria x ananassa HOM05D007669 ORTHO05D009624 2.3e-204 716.5 607 56.8
Oeu025206.1 Olea europaea HOM05D007669 ORTHO05D009624 1.5e-203 713.8 713 52.2
Lj2g0020468 Lotus japonicus HOM05D007669 ORTHO05D009624 1.7e-202 710.3 775 50.2
Nn8g40420 Nelumbo nucifera HOM05D007669 ORTHO05D009624 1.2e-200 704.1 779 49.4
Cc06_g12900 Coffea canephora HOM05D007669 ORTHO05D009624 2.3e-196 689.9 794 47.6
Migut.K00227 Erythranthe guttata HOM05D007669 ORTHO05D009624 7.5e-195 684.9 773 48.6
HanXRQChr09g0244441 Helianthus annuus HOM05D007669 ORTHO05D009624 7.5e-195 684.9 773 49.2
Cpa.g.sc115.51 Carica papaya HOM05D007669 ORTHO05D009624 3.7e-194 682.6 720 51.1
Lsat_1_v5_gn_7_54021 Lactuca sativa HOM05D007669 ORTHO05D009624 3.4e-187 659.4 752 48.4
FvH4_4g06530 Fragaria vesca HOM05D007669 ORTHO05D009624 7.6e-187 658.3 550 58.2
SalBow1G4073 Salvia bowleyana HOM05D007669 ORTHO05D009624 2.4e-185 653.3 756 47.0
MELO3C017409.2 Cucumis melo HOM05D007669 ORTHO05D009624 2.3e-183 646.7 722 49.7
Aqoxy7G02932 Aquilegia oxysepala HOM05D007669 ORTHO05D009624 3.9e-183 646.0 790 46.8
PSO170G1866 Papaver somniferum HOM05D007669 ORTHO05D009624 3.3e-182 642.9 782 46.7
PSO063G2993 Papaver somniferum HOM05D007669 ORTHO05D009624 9.6e-182 641.3 797 45.9
VMungo1215G2771 Vigna mungo HOM05D007669 ORTHO05D009624 3.1e-180 636.3 954 40.3
EL10Ac8g19326 Beta vulgaris HOM05D007669 ORTHO05D009624 5.4e-177 625.5 768 46.0
vmacro13101 Vaccinium macrocarpon HOM05D007669 ORTHO05D009624 2.5e-174 616.7 759 47.0
SGA_v2.0_scaffold17G07944 Striga asiatica HOM05D007669 ORTHO05D009624 1.6e-173 614.0 784 45.4
Ah.09g232160 Amaranthus hybridus HOM05D007669 ORTHO05D009624 2.1e-173 613.6 761 45.5
Hund06703 Selenicereus undatus HOM05D007669 ORTHO05D009624 2.1e-173 613.6 825 43.3
AUR62031310 Chenopodium quinoa HOM05D007669 ORTHO05D009624 2.4e-172 610.1 761 44.9
Sc13g0008100 Simmondsia chinensis HOM05D007669 ORTHO05D009624 1.2e-160 571.2 763 43.1
Glyma.17G056500 Glycine max HOM05D007669 ORTHO05D009624 6.7e-159 565.5 586 52.2
ECA240G0205 Erigeron canadensis HOM05D007669 ORTHO05D009624 2.5e-158 563.5 680 45.6
Psat4g013920 Pisum sativum HOM05D007669 ORTHO05D009624 7.6e-155 552.0 582 51.4
ATR0580G240 Amborella trichopoda HOM05D007669 ORTHO05D009624 1.6e-152 544.3 801 41.3
Hma1.2p1_0726F.1_g208990 Hydrangea macrophylla HOM05D007669 ORTHO05D009624 1.2e-147 528.1 550 53.6
Eucgr.D01099 Eucalyptus grandis HOM05D007669 ORTHO05D009624 4.5e-147 526.2 523 51.6
Zm00001eb432590 Zea mays HOM05D007669 ORTHO05D009624 2.0e-126 457.6 743 38.4
MBI16_g09333_MAGBIO Magnolia biondii HOM05D007669 ORTHO05D009624 3.2e-121 440.3 510 48.0
Eucgr.D01111 Eucalyptus grandis HOM05D007669 ORTHO05D009624 2.7e-120 437.2 781 38.4
CsaV3_1G032070 Cucumis sativus L. HOM05D007669 ORTHO05D009624 1.2e-118 431.8 409 54.8
AUR62027394 Chenopodium quinoa HOM05D007669 ORTHO05D009624 1.5e-113 414.8 459 47.3
HPP92_010780 Vanilla planifolia HOM05D007669 ORTHO05D009624 3.6e-112 410.2 503 43.9
Haze_22064 Corylus avellana HOM05D007669 ORTHO05D009624 1.2e-107 395.2 203 92.6
Glyma.13G102601 Glycine max HOM05D007669 ORTHO05D009624 4.2e-105 386.7 452 46.9
DCAR_017992 Daucus carota HOM05D007669 ORTHO05D009624 5.5e-105 386.3 499 42.1
Eucgr.L01386 Eucalyptus grandis HOM05D007669 ORTHO05D009624 6.1e-104 382.9 400 50.8
CDE02G1706 Ceratophyllum demersum HOM05D007669 ORTHO05D009624 1.2e-88 332.0 778 32.1
SEGI_13081 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 5.2e-87 326.6 601 33.8
FAN12G2799 Fragaria x ananassa HOM05D007669 ORTHO05D009624 6.6e-82 309.7 252 59.1
AagrBONN_evm.TU.Sc2ySwM_117.3295 Anthoceros agrestis HOM05D007669 ORTHO05D009624 2.1e-75 288.1 822 29.1
Pp3c9_5530 Physcomitrium patens HOM05D007669 ORTHO05D009624 2.1e-75 288.1 841 28.2
Haze_22063 Corylus avellana HOM05D007669 ORTHO05D009624 1.9e-65 255.0 150 94.0
SEGI_05703 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 8.1e-64 249.6 386 37.6
Mapoly0147s0035 Marchantia polymorpha HOM05D007669 ORTHO05D009624 2.4e-63 248.1 841 27.2
SMO356G0293 Selaginella moellendorffii HOM05D007669 ORTHO05D009624 5.1e-58 230.3 371 38.5
Eucgr.D01101 Eucalyptus grandis HOM05D007669 ORTHO05D009624 5.1e-50 203.8 202 54.5
COL.COLO4_25058 Corchorus olitorius HOM05D007669 ORTHO05D009624 2.5e-49 201.4 166 57.8
DCAR_017991 Daucus carota HOM05D007669 ORTHO05D009624 4.8e-48 197.2 200 46.0
Glyma.13G102550 Glycine max HOM05D007669 ORTHO05D009624 1.3e-45 189.1 268 43.7
Psat7g062600 Pisum sativum HOM05D007669 ORTHO05D009624 9.6e-41 172.9 137 60.6
CiPaw.08G030600 Carya illinoinensis HOM05D007669 ORTHO05D009624 1.8e-23 115.5 81 61.7
Lj3A156T43 Lonicera japonica HOM05D007669 ORTHO05D009624 1.2e-22 112.8 160 45.0
COL.COLO4_25059 Corchorus olitorius HOM05D007669 ORTHO05D009624 4.4e-17 94.4 166 41.6
SEGI_25409 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 3.4e-14 84.7 299 27.8
Cre07.g356600 Chlamydomonas reinhardtii HOM05D007669 ORTHO05D009624 4.5e-14 84.3 108 40.7
PRCOL_00006584 Prasinoderma coloniale HOM05D024043 ORTHO05D009624 1.0e-13 83.2 143 35.7
Psat4g139360 Pisum sativum HOM05D007669 ORTHO05D009624 1.7e-13 82.4 90 45.6
PRCOL_00001814 Prasinoderma coloniale HOM05D007669 ORTHO05D009624 5.0e-13 80.9 153 35.3
HPP92_010781 Vanilla planifolia HOM05D007669 ORTHO05D009624 1.2e-11 76.3 166 37.3
Os04g0659150 Oryza sativa ssp. japonica HOM05D007669 ORTHO05D009624 3.0e-10 71.6 159 35.8
Pp3c25_1540 Physcomitrium patens HOM05D024043 ORTHO05D031244 5.2e-10 70.9 145 31.7
MCO10G383 Micromonas commoda HOM05D024043 ORTHO05D009624 6.7e-10 70.5 95 41.1
AagrBONN_evm.TU.Sc2ySwM_369.230 Anthoceros agrestis HOM05D024043 ORTHO05D031244 3.7e-08 64.7 149 28.2
Mapoly0004s0046 Marchantia polymorpha HOM05D024043 ORTHO05D031244 4.8e-08 64.3 131 33.6
Aqoxy7G02843 Aquilegia oxysepala HOM05D000073 ORTHO05D000033 7.7e-06 57.0 91 36.3


User provided reference genes

Program Settings