Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013476 Carpinus fangiana HOM05D009016 ORTHO05D011111 1.5e-53 212.6 109 100.0
CiPaw.08G031000 Carya illinoinensis HOM05D009016 ORTHO05D011111 5.0e-33 144.4 109 72.5
Haze_22056 Corylus avellana HOM05D009016 ORTHO05D011111 6.1e-31 137.5 110 72.7
Nn8g40430 Nelumbo nucifera HOM05D009016 ORTHO05D011111 4.7e-23 111.3 115 53.9
Sabra06G0053600 Salix brachista HOM05D009016 ORTHO05D011111 1.8e-22 109.4 122 54.1
Potri.006G072300 Populus trichocarpa HOM05D009016 ORTHO05D011111 2.0e-21 105.9 122 53.3
Ciclev10010702m.g Citrus clementina HOM05D009016 ORTHO05D011111 3.4e-21 105.1 108 54.6
Potri.018G139200 Populus trichocarpa HOM05D009016 ORTHO05D011111 2.2e-20 102.4 122 51.6
Sabra18G0113800 Salix brachista HOM05D009016 ORTHO05D011111 1.4e-19 99.8 123 49.6
Eucgr.C00076 Eucalyptus grandis HOM05D009016 ORTHO05D011111 3.1e-19 98.6 118 55.9
Phvul.009G233800 Phaseolus vulgaris HOM05D009016 ORTHO05D011111 7.8e-18 94.0 96 57.3
Glyma.15G168400 Glycine max HOM05D009016 ORTHO05D011111 1.3e-17 93.2 101 57.4
Lalb_Chr07g0180761 Lupinus albus HOM05D009016 ORTHO05D011111 5.0e-17 91.3 111 51.4
RcHm_v2.0_Chr4g0398731 Rosa chinensis HOM05D009016 ORTHO05D011111 5.6e-16 87.8 113 50.4
Glyma.17G057000 Glycine max HOM05D009016 ORTHO05D011111 1.2e-15 86.7 114 49.1
Glyma.09G062000 Glycine max HOM05D009016 ORTHO05D011111 1.6e-15 86.3 103 58.3
MBI14_g09153_MAGBIO Magnolia biondii HOM05D009016 ORTHO05D011111 3.6e-15 85.1 105 47.6
Lalb_Chr12g0199701 Lupinus albus HOM05D009016 ORTHO05D011111 4.7e-15 84.7 109 50.5
Aqoxy7G02923 Aquilegia oxysepala HOM05D009016 ORTHO05D011111 6.1e-15 84.3 127 46.5
FAN12G3109 Fragaria x ananassa HOM05D009016 ORTHO05D011111 8.0e-15 84.0 114 50.9
Sed0022146 Sechium edule HOM05D009016 ORTHO05D011111 1.0e-14 83.6 109 46.8
Lj4g0009919 Lotus japonicus HOM05D009016 ORTHO05D011111 1.4e-14 83.2 102 49.0
Lalb_Chr13g0299811 Lupinus albus HOM05D009016 ORTHO05D011111 1.8e-14 82.8 95 52.6
TPR.G3985 Trifolium pratense HOM05D009016 ORTHO05D011111 4.0e-14 81.6 104 52.9
Lj6g0008159 Lotus japonicus HOM05D009016 ORTHO05D011111 6.8e-14 80.9 121 50.4
Medtr2g038500 Medicago truncatula HOM05D009016 ORTHO05D011111 3.4e-13 78.6 98 54.1
Prupe.1G071300 Prunus persica HOM05D009016 ORTHO05D011111 2.2e-12 75.9 115 49.6
CDE02G1436 Ceratophyllum demersum HOM05D009016 ORTHO05D011111 2.9e-12 75.5 106 43.4
Glyma.13G102100 Glycine max HOM05D009016 ORTHO05D011111 8.3e-12 73.9 108 50.0
MBI16_g09340_MAGBIO Magnolia biondii HOM05D009016 ORTHO05D011111 4.6e-10 68.2 109 40.4
VMungo1215G0588 Vigna mungo HOM05D009016 ORTHO05D011111 1.7e-09 66.2 105 43.8
Dinv41205 Davidia involucrata HOM05D009016 ORTHO05D011111 5.0e-09 64.7 63 57.1
Medtr1g093170 Medicago truncatula HOM05D009016 ORTHO05D011111 1.9e-08 62.8 94 45.7
Phvul.003G139400 Phaseolus vulgaris HOM05D009016 ORTHO05D011111 4.3e-08 61.6 102 42.2


User provided reference genes

Program Settings