Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013405 Carpinus fangiana HOM05D007139 ORTHO05D009171 1.4e-70 270.0 188 100.0
CiPaw.08G034800 Carya illinoinensis HOM05D007139 ORTHO05D009171 1.2e-50 203.8 188 74.5
QL11p005114 Quercus lobata HOM05D007139 ORTHO05D009171 1.5e-48 196.8 192 77.6
Haze_21948 Corylus avellana HOM05D007139 ORTHO05D009171 1.2e-47 193.7 102 96.1
TWI63G0338 Tripterygium wilfordii HOM05D007139 ORTHO05D009171 8.9e-46 187.6 188 70.7
GSVIVG01029235001 Vitis vinifera HOM05D007139 ORTHO05D009171 1.3e-41 173.7 190 67.9
Cpa.g.c34934.2 Carica papaya HOM05D007139 ORTHO05D009171 2.5e-40 169.5 189 68.8
Dinv19561 Davidia involucrata HOM05D007139 ORTHO05D009171 2.5e-40 169.5 191 79.1
CiPaw.07G194300 Carya illinoinensis HOM05D007139 ORTHO05D009171 7.3e-40 167.9 188 55.3
Glyma.13G098100 Glycine max HOM05D007139 ORTHO05D009171 7.3e-40 167.9 192 70.3
RcHm_v2.0_Chr4g0400871 Rosa chinensis HOM05D007139 ORTHO05D009171 7.3e-40 167.9 196 58.7
MD13G1247100 Malus domestica HOM05D007139 ORTHO05D009171 1.2e-39 167.2 186 71.5
Atru.chr7.836 Acer truncatum HOM05D007139 ORTHO05D009171 1.4e-38 163.7 124 71.0
Rhsim01G0002000 Rhododendron simsii HOM05D007139 ORTHO05D009171 1.8e-38 163.3 192 69.3
FAN12G3123 Fragaria x ananassa HOM05D007139 ORTHO05D009171 3.1e-38 162.5 191 57.1
Nn8g40530 Nelumbo nucifera HOM05D007139 ORTHO05D009171 3.1e-38 162.5 189 54.0
FvH4_4g07780 Fragaria vesca HOM05D007139 ORTHO05D009171 8.9e-38 161.0 191 56.5
Hund09039 Selenicereus undatus HOM05D007139 ORTHO05D009171 8.9e-38 161.0 191 70.2
Potri.006G165800 Populus trichocarpa HOM05D007139 ORTHO05D009171 1.2e-37 160.6 190 54.2
TAR383G0430 Trochodendron aralioides HOM05D007139 ORTHO05D009171 1.5e-37 160.2 191 70.2
FAN07G2196 Fragaria x ananassa HOM05D007139 ORTHO05D009171 3.4e-37 159.1 191 66.0
FAN22G0146 Fragaria x ananassa HOM05D007139 ORTHO05D009171 3.4e-37 159.1 191 58.1
Gohir.D08G029700 Gossypium hirsutum HOM05D007139 ORTHO05D009171 7.5e-37 157.9 188 69.1
Gorai.004G027200 Gossypium raimondii HOM05D007139 ORTHO05D009171 7.5e-37 157.9 188 69.1
Sabra06G0127600 Salix brachista HOM05D007139 ORTHO05D009171 8.3e-36 154.5 196 51.0
Hma1.2p1_1086F.1_g255460 Hydrangea macrophylla HOM05D007139 ORTHO05D009171 1.1e-35 154.1 188 69.1
Gohir.A08G019100 Gossypium hirsutum HOM05D007139 ORTHO05D009171 1.4e-35 153.7 188 66.0
ClCG11G011980 Citrullus lanatus HOM05D007139 ORTHO05D009171 7.8e-34 147.9 195 58.5
PGR044G0070 Punica granatum HOM05D007139 ORTHO05D009171 1.3e-33 147.1 193 67.4
MELO3C004003.2 Cucumis melo HOM05D007139 ORTHO05D009171 2.3e-33 146.4 193 49.7
Lalb_Chr12g0199481 Lupinus albus HOM05D007139 ORTHO05D009171 3.9e-33 145.6 192 65.1
Glyma.17G061600 Glycine max HOM05D007139 ORTHO05D009171 1.5e-32 143.7 190 66.8
AUR62021317 Chenopodium quinoa HOM05D007139 ORTHO05D009171 1.9e-32 143.3 187 48.7
FAN17G0841 Fragaria x ananassa HOM05D007139 ORTHO05D009171 1.9e-32 143.3 191 59.7
AUR62033234 Chenopodium quinoa HOM05D007139 ORTHO05D009171 4.3e-32 142.1 187 48.7
CARHR271140 Cardamine hirsuta HOM05D007139 ORTHO05D009171 5.6e-32 141.7 126 64.3
AL8G33320 Arabidopsis lyrata HOM05D007139 ORTHO05D009171 7.3e-32 141.4 187 66.8
Gohir.D05G004250 Gossypium hirsutum HOM05D007139 ORTHO05D009171 1.6e-31 140.2 170 65.9
AT5G57345 Arabidopsis thaliana HOM05D007139 ORTHO05D009171 2.1e-31 139.8 187 66.8
Sopen07g006630 Solanum pennellii HOM05D007139 ORTHO05D009171 2.8e-31 139.4 194 61.3
Gorai.009G004000 Gossypium raimondii HOM05D007139 ORTHO05D009171 3.6e-31 139.0 167 65.9
Cc06_g13070 Coffea canephora HOM05D007139 ORTHO05D009171 8.1e-31 137.9 193 54.9
THA.LOC104813514 Tarenaya hassleriana HOM05D007139 ORTHO05D009171 1.4e-30 137.1 184 48.9
A02p08570 Brassica napus HOM05D007139 ORTHO05D009171 3.1e-30 136.0 127 61.4
BraA02t05926Z Brassica rapa HOM05D007139 ORTHO05D009171 3.1e-30 136.0 127 61.4
Thhalv10014766m.g Eutrema salsugineum HOM05D007139 ORTHO05D009171 3.1e-30 136.0 188 61.2
CAN.G32.11 Capsicum annuum HOM05D007139 ORTHO05D009171 4.0e-30 135.6 130 64.6
Lj4g0008370 Lotus japonicus HOM05D007139 ORTHO05D009171 4.0e-30 135.6 129 61.2
Aqoxy7G02982 Aquilegia oxysepala HOM05D007139 ORTHO05D009171 5.2e-30 135.2 188 59.6
Carub.0008s1786 Capsella rubella HOM05D007139 ORTHO05D009171 6.8e-30 134.8 193 55.4
VMungo1215G0446 Vigna mungo HOM05D007139 ORTHO05D009171 6.8e-30 134.8 154 74.7
vmacro13142 Vaccinium macrocarpon HOM05D007139 ORTHO05D009171 8.9e-30 134.4 193 63.2
Eucgr.C02387 Eucalyptus grandis HOM05D007139 ORTHO05D009171 1.2e-29 134.0 138 79.0
SGA_v2.0_scaffold66G22428 Striga asiatica HOM05D007139 ORTHO05D009171 1.5e-29 133.7 192 58.9
BcaB05g22339 Brassica carinata HOM05D007139 ORTHO05D009171 2.0e-29 133.3 126 60.3
Phvul.003G143600 Phaseolus vulgaris HOM05D007139 ORTHO05D009171 2.6e-29 132.9 193 64.2
Ciclev10009657m.g Citrus clementina HOM05D007139 ORTHO05D009171 3.4e-29 132.5 188 47.9
Aa31LG3G13220 Aethionema arabicum HOM05D007139 ORTHO05D009171 9.9e-29 131.0 128 60.2
Psat0s3717g0080 Pisum sativum HOM05D007139 ORTHO05D009171 1.3e-28 130.6 194 44.8
Sc18g0007530 Simmondsia chinensis HOM05D007139 ORTHO05D009171 1.3e-28 130.6 154 70.8
Peaxi162Scf01054g00025 Petunia axillaris HOM05D007139 ORTHO05D009171 1.7e-28 130.2 194 50.0
Oeu025690.1 Olea europaea HOM05D007139 ORTHO05D009171 2.2e-28 129.8 187 62.0
Ah.09g230020 Amaranthus hybridus HOM05D000263 ORTHO05D000213 3.8e-28 129.0 193 44.0
Medtr4g127690 Medicago truncatula HOM05D007139 ORTHO05D009171 6.4e-28 128.3 133 57.9
MBI14_g08139_MAGBIO Magnolia biondii HOM05D007139 ORTHO05D009171 1.9e-27 126.7 188 60.6
Nitab4.5_0000055g0210 Nicotiana tabacum HOM05D007139 ORTHO05D009171 2.4e-27 126.3 133 59.4
Thecc.09G178100 Theobroma cacao HOM05D007139 ORTHO05D009171 3.2e-27 125.9 188 47.9
BcaC03g14161 Brassica carinata HOM05D007139 ORTHO05D009171 7.1e-27 124.8 193 62.7
Actinidia02506 Actinidia chinensis HOM05D007139 ORTHO05D009171 9.2e-27 124.4 131 62.6
Hund09038 Selenicereus undatus HOM05D007139 ORTHO05D009171 1.6e-26 123.6 123 60.2
CDE07G0879 Ceratophyllum demersum HOM05D007139 ORTHO05D009171 1.3e-25 120.6 133 57.9
ECA234G0508 Erigeron canadensis HOM05D007139 ORTHO05D009171 2.3e-25 119.8 197 56.9
ATR0580G128 Amborella trichopoda HOM05D007139 ORTHO05D009171 5.1e-25 118.6 191 45.0
Sed0022431 Sechium edule HOM05D007139 ORTHO05D009171 1.5e-24 117.1 191 58.1
Nitab4.5_0013636g0010 Nicotiana tabacum HOM05D007139 ORTHO05D009171 2.5e-24 116.3 133 58.6
Ah.14g083710 Amaranthus hybridus HOM05D007139 ORTHO05D009171 7.3e-24 114.8 126 54.0
PSO170G0255 Papaver somniferum HOM05D007139 ORTHO05D009171 7.3e-24 114.8 197 51.8
PSO063G4029 Papaver somniferum HOM05D007139 ORTHO05D009171 2.8e-23 112.8 196 51.0
COL.COLO4_06001 Corchorus olitorius HOM05D007139 ORTHO05D009171 6.2e-23 111.7 186 44.1
CsaV3_2G008540 Cucumis sativus L. HOM05D007139 ORTHO05D009171 6.2e-23 111.7 76 82.9
CANSAT11G2567 Cannabis sativa HOM05D007139 ORTHO05D009171 8.1e-23 111.3 184 46.2
Migut.J01499 Erythranthe guttata HOM05D007139 ORTHO05D009171 1.1e-22 110.9 196 45.9
Lsat_1_v5_gn_5_85520 Lactuca sativa HOM05D007139 ORTHO05D009171 2.4e-22 109.8 195 55.9
Manes.14G157565 Manihot esculenta HOM05D007139 ORTHO05D009171 2.4e-22 109.8 188 47.9
Duzib168G1431 Durio zibethinus HOM05D007139 ORTHO05D009171 3.1e-22 109.4 189 45.5
HanXRQChr12g0384691 Helianthus annuus HOM05D007139 ORTHO05D009171 5.2e-22 108.6 198 56.6
MSTRG.6235 Avicennia marina HOM05D007139 ORTHO05D009171 9.0e-22 107.8 191 41.4
HPP92_017140 Vanilla planifolia HOM05D007139 ORTHO05D009171 1.2e-21 107.5 123 54.5
TPR.G5382 Trifolium pratense HOM05D007139 ORTHO05D009171 3.4e-21 105.9 79 72.2
Ca_21240_v3 Cicer arietinum L. HOM05D007139 ORTHO05D009171 4.4e-21 105.5 95 65.3
Gohir.A05G003850 Gossypium hirsutum HOM05D007139 ORTHO05D009171 1.7e-20 103.6 100 60.0
Zm00001eb226320 Zea mays HOM05D007139 ORTHO05D009171 1.7e-20 103.6 185 45.4
Lju50A10T16 Lonicera japonica HOM05D007139 ORTHO05D009171 4.9e-20 102.1 81 69.1
A10p14810 Brassica napus HOM05D007139 ORTHO05D009171 2.4e-19 99.8 90 61.1
Duzib150G0167 Durio zibethinus HOM05D007139 ORTHO05D009171 6.0e-18 95.1 189 47.1
DCAR_020130 Daucus carota HOM05D007139 ORTHO05D009171 2.3e-17 93.2 143 65.7
Os06g0694800 Oryza sativa ssp. japonica HOM05D007139 ORTHO05D009171 5.1e-17 92.0 113 58.4
SEGI_32174 Sequoiadendron giganteum HOM05D007139 ORTHO05D009171 6.6e-17 91.7 128 46.1
EL10Ac8g18300 Beta vulgaris HOM05D007139 ORTHO05D009171 1.9e-16 90.1 189 35.4
Lsat_1_v5_gn_1_19521 Lactuca sativa HOM05D007139 ORTHO05D009171 1.6e-10 70.5 65 61.5
Haze_21949 Corylus avellana HOM05D007139 ORTHO05D009171 8.7e-09 64.7 81 87.7
arahy.Tifrunner.gnm1.ann1.832R2S Arachis hypogaea HOM05D007139 ORTHO05D009171 5.6e-08 62.0 186 36.0
Sp6g19070 Schrenkiella parvula HOM05D007139 ORTHO05D009171 7.4e-08 61.6 132 37.9
arahy.Tifrunner.gnm1.ann1.N1BBZF Arachis hypogaea HOM05D007139 ORTHO05D009171 3.7e-07 59.3 95 46.3
AagrBONN_evm.TU.Sc2ySwM_344.2913 Anthoceros agrestis HOM05D007139 ORTHO05D009171 6.2e-07 58.5 133 41.4


User provided reference genes

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