Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013402 Carpinus fangiana HOM05D004497 ORTHO05D005539 5.9e-245 850.5 455 100.0
Haze_07247 Corylus avellana HOM05D004497 ORTHO05D005539 7.8e-221 770.4 495 86.3
CiPaw.08G116800 Carya illinoinensis HOM05D004497 ORTHO05D005539 1.7e-199 699.5 454 76.4
QL10p004476 Quercus lobata HOM05D004497 ORTHO05D005539 1.7e-188 662.9 393 82.2
QL93p0225_0015 Quercus lobata HOM05D004497 ORTHO05D005539 3.6e-186 655.2 393 81.2
QL07p000007 Quercus lobata HOM05D004497 ORTHO05D005539 5.3e-185 651.4 393 80.7
QL04p081834 Quercus lobata HOM05D004497 ORTHO05D005539 2.0e-184 649.4 407 78.9
Cfa014010 Carpinus fangiana HOM05D004497 ORTHO05D005539 2.2e-183 646.0 444 77.9
Thecc.03G125300 Theobroma cacao HOM05D004497 ORTHO05D005539 3.2e-174 615.5 391 75.7
RcHm_v2.0_Chr7g0190661 Rosa chinensis HOM05D004497 ORTHO05D005539 4.2e-174 615.1 394 74.9
Actinidia25597 Actinidia chinensis HOM05D004497 ORTHO05D005539 3.0e-172 609.0 393 74.3
Duzib205G0501 Durio zibethinus HOM05D004497 ORTHO05D005539 1.5e-171 606.7 391 74.2
Gohir.A09G246200 Gossypium hirsutum HOM05D004497 ORTHO05D005539 3.3e-171 605.5 391 75.4
Gohir.D09G246800 Gossypium hirsutum HOM05D004497 ORTHO05D005539 2.1e-170 602.8 391 74.4
GSVIVG01013111001 Vitis vinifera HOM05D004497 ORTHO05D005539 4.0e-169 598.6 389 74.3
TAR625G0069 Trochodendron aralioides HOM05D004497 ORTHO05D005539 5.3e-169 598.2 391 72.6
Gorai.006G271300 Gossypium raimondii HOM05D004497 ORTHO05D005539 4.5e-168 595.1 391 73.9
FvH4_5g07760 Fragaria vesca HOM05D004497 ORTHO05D005539 1.7e-167 593.2 391 73.1
FAN18G2816 Fragaria x ananassa HOM05D004497 ORTHO05D005539 3.8e-167 592.0 391 72.9
COL.COLO4_28066 Corchorus olitorius HOM05D004497 ORTHO05D005539 1.1e-166 590.5 391 72.9
Atru.chr3.3406 Acer truncatum HOM05D004497 ORTHO05D005539 1.4e-166 590.1 452 66.2
FAN08G0052 Fragaria x ananassa HOM05D004497 ORTHO05D005539 2.5e-166 589.3 391 72.9
Rhsim08G0187300 Rhododendron simsii HOM05D004497 ORTHO05D005539 3.2e-166 589.0 408 69.9
FAN04G2053 Fragaria x ananassa HOM05D004497 ORTHO05D005539 7.9e-165 584.3 391 72.1
TAR629G1275 Trochodendron aralioides HOM05D004497 ORTHO05D005539 1.0e-164 583.9 401 70.1
Gohir.A12G276900 Gossypium hirsutum HOM05D004497 ORTHO05D005539 5.1e-164 581.6 359 77.4
CSS0032894 Camellia sinensis var. sinensis HOM05D004497 ORTHO05D005539 1.9e-163 579.7 395 71.1
TWI14G0260 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 2.5e-163 579.3 392 70.2
Potri.015G092400 Populus trichocarpa HOM05D004497 ORTHO05D005539 3.7e-162 575.5 393 71.0
Eucgr.K00186 Eucalyptus grandis HOM05D004497 ORTHO05D005539 1.1e-161 573.9 394 68.8
Nitab4.5_0002978g0150 Nicotiana tabacum HOM05D004497 ORTHO05D005539 1.4e-161 573.5 393 70.2
Sabra15G0114200 Salix brachista HOM05D004497 ORTHO05D005539 9.0e-161 570.9 393 70.2
CsaV3_1G009480 Cucumis sativus L. HOM05D004497 ORTHO05D005539 2.6e-160 569.3 394 69.3
MD14G1161100 Malus domestica HOM05D004497 ORTHO05D005539 2.6e-160 569.3 396 71.0
Eucgr.C01065 Eucalyptus grandis HOM05D004497 ORTHO05D005539 4.5e-160 568.5 394 69.0
Lsat_1_v5_gn_5_13520 Lactuca sativa HOM05D004497 ORTHO05D005539 5.9e-160 568.2 388 70.9
Nitab4.5_0000903g0080 Nicotiana tabacum HOM05D004497 ORTHO05D005539 5.9e-160 568.2 374 71.9
MD06G1147200 Malus domestica HOM05D004497 ORTHO05D005539 1.3e-159 567.0 395 70.6
Nn4g26409 Nelumbo nucifera HOM05D004497 ORTHO05D005539 2.2e-159 566.2 393 69.7
CANSAT56G3508 Cannabis sativa HOM05D004497 ORTHO05D005539 8.5e-159 564.3 425 68.0
vmacro20468 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 8.5e-159 564.3 371 71.7
Potri.012G095100 Populus trichocarpa HOM05D004497 ORTHO05D005539 1.1e-158 563.9 392 70.4
HanXRQChr05g0153981 Helianthus annuus HOM05D004497 ORTHO05D005539 2.5e-158 562.8 377 71.4
Ciclev10020238m.g Citrus clementina HOM05D004497 ORTHO05D005539 1.6e-157 560.1 393 70.0
Lj1g0020744 Lotus japonicus HOM05D004497 ORTHO05D005539 7.9e-157 557.8 391 69.8
ClCG03G003620 Citrullus lanatus HOM05D004497 ORTHO05D005539 6.7e-156 554.7 395 67.8
ECA246G4485 Erigeron canadensis HOM05D004497 ORTHO05D005539 8.7e-156 554.3 456 61.8
Ca_09070_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 1.1e-155 553.9 391 68.0
Ca_04603_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 1.5e-155 553.5 464 61.0
Lj9A476T57 Lonicera japonica HOM05D004497 ORTHO05D005539 2.5e-155 552.7 340 75.6
Lalb_Chr03g0040831 Lupinus albus HOM05D004497 ORTHO05D005539 2.5e-155 552.7 392 67.1
Migut.I00519 Erythranthe guttata HOM05D004497 ORTHO05D005539 4.3e-155 552.0 392 69.4
Dinv11148 Davidia involucrata HOM05D004497 ORTHO05D005539 9.7e-155 550.8 368 73.6
Glyma.16G034400 Glycine max HOM05D004497 ORTHO05D005539 2.2e-154 549.7 391 66.8
FAN13G1359 Fragaria x ananassa HOM05D004497 ORTHO05D005539 1.4e-153 547.0 398 67.6
Hund03342 Selenicereus undatus HOM05D004497 ORTHO05D005539 6.9e-153 544.7 360 70.6
TPR.G34454 Trifolium pratense HOM05D004497 ORTHO05D005539 9.1e-153 544.3 381 68.2
Medtr7g106650 Medicago truncatula HOM05D004497 ORTHO05D005539 1.5e-152 543.5 455 62.0
Sed0020059 Sechium edule HOM05D004497 ORTHO05D005539 4.5e-152 542.0 394 66.5
Sc10g0010400 Simmondsia chinensis HOM05D004497 ORTHO05D005539 4.5e-152 542.0 358 69.3
SGA_v2.0_scaffold215G42316 Striga asiatica HOM05D004497 ORTHO05D005539 1.0e-151 540.8 392 66.8
VMungo0331G1674 Vigna mungo HOM05D004497 ORTHO05D005539 1.7e-151 540.0 391 65.2
Glyma.07G068400 Glycine max HOM05D004497 ORTHO05D005539 3.8e-151 538.9 355 70.1
Psat3g028160 Pisum sativum HOM05D004497 ORTHO05D005539 3.8e-151 538.9 414 64.3
Phvul.003G017500 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 8.5e-151 537.7 391 65.0
PGR083G2085 Punica granatum HOM05D004497 ORTHO05D005539 1.1e-150 537.3 392 66.3
PGSC0003DMG400005828 Solanum tuberosum HOM05D004497 ORTHO05D005539 1.9e-150 536.6 359 70.5
CiPaw.11G010200 Carya illinoinensis HOM05D004497 ORTHO05D005539 4.2e-150 535.4 389 71.0
MELO3C002347.2 Cucumis melo HOM05D004497 ORTHO05D005539 4.2e-150 535.4 340 73.2
arahy.Tifrunner.gnm1.ann1.16KDXT Arachis hypogaea HOM05D004497 ORTHO05D005539 5.5e-150 535.0 391 66.8
arahy.Tifrunner.gnm1.ann1.0L2FVX Arachis hypogaea HOM05D004497 ORTHO05D005539 7.2e-150 534.6 391 66.8
Manes.14G053800 Manihot esculenta HOM05D004497 ORTHO05D005539 9.4e-150 534.3 349 73.1
Sopen08g004010 Solanum pennellii HOM05D004497 ORTHO05D005539 1.2e-149 533.9 359 70.2
Solyc08g008160.4 Solanum lycopersicum HOM05D004497 ORTHO05D005539 2.7e-149 532.7 359 70.2
Ah.08g212900 Amaranthus hybridus HOM05D004497 ORTHO05D005539 4.7e-149 531.9 400 64.8
MSTRG.22910 Avicennia marina HOM05D004497 ORTHO05D005539 4.7e-149 531.9 392 67.3
Oeu005018.3 Olea europaea HOM05D004497 ORTHO05D005539 7.9e-149 531.2 428 62.1
Dinv04858 Davidia involucrata HOM05D004497 ORTHO05D005539 1.4e-148 530.4 321 77.9
EL10As4g23444 Beta vulgaris HOM05D004497 ORTHO05D005539 1.8e-148 530.0 405 64.0
Peaxi162Scf00078g00424 Petunia axillaris HOM05D004497 ORTHO05D005539 2.0e-147 526.6 339 72.6
SalBow8G1477 Salvia bowleyana HOM05D004497 ORTHO05D005539 4.4e-147 525.4 392 65.8
Aqoxy5G03475 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 1.3e-146 523.9 385 65.2
MBI11_g15865_MAGBIO Magnolia biondii HOM05D004497 ORTHO05D005539 2.2e-146 523.1 400 63.8
PSO782G0077 Papaver somniferum HOM05D004497 ORTHO05D005539 3.1e-145 519.2 377 67.1
PSO063G4711 Papaver somniferum HOM05D004497 ORTHO05D005539 6.9e-145 518.1 377 67.1
SalBow5G0098 Salvia bowleyana HOM05D004497 ORTHO05D005539 9.1e-145 517.7 418 62.4
SalBow5G4825 Salvia bowleyana HOM05D004497 ORTHO05D005539 9.1e-145 517.7 418 62.4
THA.LOC104820611 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 5.9e-144 515.0 359 67.4
Cc05_g04600 Coffea canephora HOM05D004497 ORTHO05D005539 2.1e-141 506.5 394 63.7
CDE08G0729 Ceratophyllum demersum HOM05D004497 ORTHO05D005539 6.7e-140 501.5 391 62.4
Prupe.1G584300 Prunus persica HOM05D004497 ORTHO05D005539 2.6e-139 499.6 395 64.8
THA.LOC104814264 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 1.3e-138 497.3 356 65.2
TWI39G1139 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 1.7e-135 486.9 418 60.5
AUR62025903 Chenopodium quinoa HOM05D004497 ORTHO05D005539 2.5e-134 483.0 392 61.2
Sp1g25270 Schrenkiella parvula HOM05D004497 ORTHO05D005539 3.2e-134 482.6 360 63.3
AT1G29320 Arabidopsis thaliana HOM05D004497 ORTHO05D005539 2.1e-133 479.9 394 60.2
Carub.0001s2754 Capsella rubella HOM05D004497 ORTHO05D005539 2.7e-133 479.6 395 60.3
Thhalv10007651m.g Eutrema salsugineum HOM05D004497 ORTHO05D005539 1.4e-132 477.2 360 62.5
AL1G43130 Arabidopsis lyrata HOM05D004497 ORTHO05D005539 5.2e-132 475.3 394 59.9
A08p25140 Brassica napus HOM05D004497 ORTHO05D005539 5.2e-132 475.3 360 62.2
CARHR028640 Cardamine hirsuta HOM05D004497 ORTHO05D005539 1.2e-131 474.2 394 59.4
BolC3t19835H Brassica oleracea HOM05D004497 ORTHO05D005539 2.0e-131 473.4 384 59.6
DCAR_012679 Daucus carota HOM05D004497 ORTHO05D005539 5.7e-131 471.9 361 64.0
C03p75750 Brassica napus HOM05D004497 ORTHO05D005539 1.3e-130 470.7 360 61.9
BcaC01g00099 Brassica carinata HOM05D004497 ORTHO05D005539 2.2e-130 469.9 360 61.9
BraA09t39216Z Brassica rapa HOM05D004497 ORTHO05D005539 3.7e-130 469.2 386 59.3
BcaB07g32523 Brassica carinata HOM05D004497 ORTHO05D005539 1.4e-129 467.2 362 62.2
BcaB03g12154 Brassica carinata HOM05D004497 ORTHO05D005539 1.8e-129 466.8 361 61.2
Duzib068G0683 Durio zibethinus HOM05D004497 ORTHO05D005539 1.2e-128 464.2 291 75.9
BcaC05g26958 Brassica carinata HOM05D004497 ORTHO05D005539 1.6e-128 463.8 386 58.3
C05p28100 Brassica napus HOM05D004497 ORTHO05D005539 1.6e-128 463.8 386 58.3
Aa31LG6G6220 Aethionema arabicum HOM05D004497 ORTHO05D005539 2.7e-128 463.0 368 60.9
BraA08t34469Z Brassica rapa HOM05D004497 ORTHO05D005539 2.7e-128 463.0 411 55.7
BolC5t31537H Brassica oleracea HOM05D004497 ORTHO05D005539 5.9e-128 461.8 360 61.1
A09p36980 Brassica napus HOM05D004497 ORTHO05D005539 3.8e-127 459.1 360 61.1
HPP92_023861 Vanilla planifolia HOM05D004497 ORTHO05D005539 1.0e-124 451.1 360 60.3
AUR62032705 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.7e-122 443.7 403 56.1
Zm00001eb105680 Zea mays HOM05D004497 ORTHO05D005539 3.7e-122 442.6 361 59.8
Cpa.g.sc166.23 Carica papaya HOM05D004497 ORTHO05D005539 3.5e-120 436.0 291 69.4
AUR62025086 Chenopodium quinoa HOM05D004497 ORTHO05D005539 4.5e-120 435.6 428 53.5
SEGI_30468 Sequoiadendron giganteum HOM05D004497 ORTHO05D005539 1.0e-119 434.5 403 52.1
ATR0171G018 Amborella trichopoda HOM05D004497 ORTHO05D005539 1.5e-118 430.6 389 55.5
Sed0003097 Sechium edule HOM05D004497 ORTHO05D005539 4.5e-112 409.1 286 68.9
SHI10599 Sapria himalayana HOM05D004497 ORTHO05D005539 8.9e-108 394.8 322 59.0
unitig_699.g19657 Utricularia gibba HOM05D004497 ORTHO05D005539 2.0e-104 383.6 392 53.1
Aqoxy5G03495 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 4.6e-104 382.5 296 61.5
Sabra12G0069700 Salix brachista HOM05D004497 ORTHO05D005539 3.0e-103 379.8 295 63.4
AUR62025094 Chenopodium quinoa HOM05D004497 ORTHO05D005539 2.5e-94 350.1 291 59.5
Mapoly0079s0016 Marchantia polymorpha HOM05D004497 ORTHO05D005539 1.5e-91 340.9 395 46.6
Os07g0506700 Oryza sativa ssp. japonica HOM05D004497 ORTHO05D005539 9.9e-91 338.2 295 56.6
Pp3c13_24500 Physcomitrium patens HOM05D004497 ORTHO05D005539 3.0e-87 326.6 407 45.0
SMO165G0173 Selaginella moellendorffii HOM05D004497 ORTHO05D005539 1.9e-86 323.9 395 44.8
Nitab4.5_0003013g0030 Nicotiana tabacum HOM05D004497 ORTHO05D005539 1.4e-84 317.8 391 48.3
vmacro19222 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 2.4e-76 290.4 344 47.7
Zm00001eb322320 Zea mays HOM05D004497 ORTHO05D005539 1.1e-73 281.6 201 65.2
Actinidia19491 Actinidia chinensis HOM05D004497 ORTHO05D005539 4.2e-73 279.6 324 49.4
AUR62029644 Chenopodium quinoa HOM05D004497 ORTHO05D005539 6.0e-64 249.2 228 56.1
RcHm_v2.0_Chr0c30g0501231 Rosa chinensis HOM05D004497 ORTHO05D005539 4.3e-62 243.0 365 41.9
RcHm_v2.0_Chr3g0452771 Rosa chinensis HOM05D004497 ORTHO05D005539 4.3e-62 243.0 365 41.9
AagrBONN_evm.TU.Sc2ySwM_344.3271 Anthoceros agrestis HOM05D000006 ORTHO05D004030 6.2e-61 239.2 303 44.9
Ca_16680_v3 Cicer arietinum L. HOM05D000160 ORTHO05D000496 6.7e-55 219.2 133 75.2
SalBow8G1815 Salvia bowleyana HOM05D004497 ORTHO05D005539 2.5e-54 217.2 157 70.1
AUR62025088 Chenopodium quinoa HOM05D004497 ORTHO05D005539 4.9e-50 203.0 232 46.6
CBR_g31949 Chara braunii HOM05D004497 ORTHO05D005539 2.1e-48 197.6 383 35.2
RcHm_v2.0_Chr5g0041021 Rosa chinensis HOM05D004497 ORTHO05D005539 1.1e-46 191.8 367 37.3
AUR62025079 Chenopodium quinoa HOM05D004497 ORTHO05D005539 6.5e-42 176.0 270 38.1
Gohir.D13G181701 Gossypium hirsutum HOM05D004497 ORTHO05D005539 7.4e-30 136.0 105 63.8
TAR371G1248 Trochodendron aralioides HOM05D004497 ORTHO05D005539 5.0e-26 123.2 133 49.6
Cre17.g718650 Chlamydomonas reinhardtii HOM05D004497 ORTHO05D005539 1.1e-25 122.1 381 26.0
MCO03G018 Micromonas commoda HOM05D004497 ORTHO05D005539 5.2e-23 113.2 245 31.0
Oeu006698.1 Olea europaea HOM05D004497 ORTHO05D005539 7.0e-20 102.8 71 71.8
PRCOL_00003967 Prasinoderma coloniale HOM05D004497 ORTHO05D005539 1.5e-17 95.1 250 26.0
AUR62025092 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.2e-16 92.0 53 75.5
C04p39580 Brassica napus HOM05D004497 ORTHO05D005539 2.1e-16 91.3 84 56.0
BolC4t25523H Brassica oleracea HOM05D004497 ORTHO05D005539 2.1e-16 91.3 84 56.0
Phvul.003G017700 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 4.7e-16 90.1 75 57.3
COL.COLO4_36170 Corchorus olitorius HOM05D021494 ORTHO05D022415 1.6e-11 75.1 41 82.9


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