Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013398 Carpinus fangiana HOM05D004757 ORTHO05D005743 3.1e-69 265.0 133 100.0
Haze_21940 Corylus avellana HOM05D004757 ORTHO05D005743 4.6e-57 224.6 115 95.7
CiPaw.07G193700 Carya illinoinensis HOM05D004757 ORTHO05D005743 4.8e-54 214.5 133 80.5
Potri.006G166400 Populus trichocarpa HOM05D004757 ORTHO05D005743 1.8e-48 196.1 146 73.3
ClCG06G013460 Citrullus lanatus HOM05D004757 ORTHO05D005743 3.9e-48 194.9 138 70.3
Atru.chr7.878 Acer truncatum HOM05D004757 ORTHO05D005743 3.3e-47 191.8 135 74.1
Manes.06G022800 Manihot esculenta HOM05D004757 ORTHO05D005743 4.4e-47 191.4 135 75.6
Manes.14G157383 Manihot esculenta HOM05D004757 ORTHO05D005743 4.4e-47 191.4 135 72.6
CsaV3_1G031720 Cucumis sativus L. HOM05D004757 ORTHO05D005743 1.7e-46 189.5 138 68.1
QL02p098330 Quercus lobata HOM05D004757 ORTHO05D005743 4.5e-44 181.4 168 62.5
Sed0015670 Sechium edule HOM05D004757 ORTHO05D005743 1.3e-43 179.9 136 66.2
Duzib150G0244 Durio zibethinus HOM05D004757 ORTHO05D005743 1.7e-43 179.5 140 66.4
Gohir.A08G083700 Gossypium hirsutum HOM05D004757 ORTHO05D005743 2.9e-43 178.7 139 68.3
Gohir.D08G093400 Gossypium hirsutum HOM05D004757 ORTHO05D005743 2.9e-43 178.7 139 69.1
TWI34G1741 Tripterygium wilfordii HOM05D004757 ORTHO05D005743 6.5e-43 177.6 136 70.6
CiPaw.08G035200 Carya illinoinensis HOM05D004757 ORTHO05D005743 1.9e-42 176.0 141 66.7
Lj4g0011233 Lotus japonicus HOM05D004757 ORTHO05D005743 1.9e-42 176.0 136 71.3
Duzib168G0914 Durio zibethinus HOM05D004757 ORTHO05D005743 2.5e-42 175.6 138 66.7
BcaB07g31638 Brassica carinata HOM05D004757 ORTHO05D005743 4.2e-42 174.9 134 69.4
Potri.018G090900 Populus trichocarpa HOM05D004757 ORTHO05D005743 4.2e-42 174.9 144 66.7
TWI63G0987 Tripterygium wilfordii HOM05D004757 ORTHO05D005743 4.2e-42 174.9 136 68.4
Thecc.09G175100 Theobroma cacao HOM05D004757 ORTHO05D005743 5.5e-42 174.5 141 66.0
Duzib170G0153 Durio zibethinus HOM05D004757 ORTHO05D005743 7.2e-42 174.1 140 66.4
AL3G53010 Arabidopsis lyrata HOM05D004757 ORTHO05D005743 2.1e-41 172.6 134 67.9
BcaC04g22879 Brassica carinata HOM05D004757 ORTHO05D005743 2.7e-41 172.2 134 70.1
A07p01750 Brassica napus HOM05D004757 ORTHO05D005743 3.6e-41 171.8 134 67.2
Medtr4g127810 Medicago truncatula HOM05D004757 ORTHO05D005743 3.6e-41 171.8 139 69.8
AT2G18910 Arabidopsis thaliana HOM05D004757 ORTHO05D005743 4.7e-41 171.4 134 67.2
Cpa.g.sc95.44 Carica papaya HOM05D004757 ORTHO05D005743 8.0e-41 170.6 135 69.6
Glyma.17G062100 Glycine max HOM05D004757 ORTHO05D005743 8.0e-41 170.6 134 67.2
Sed0003925 Sechium edule HOM05D004757 ORTHO05D005743 8.0e-41 170.6 138 63.0
TPR.G5446 Trifolium pratense HOM05D004757 ORTHO05D005743 1.0e-40 170.2 141 67.4
A09p12120 Brassica napus HOM05D004757 ORTHO05D005743 1.4e-40 169.9 135 68.9
MD16G1255800 Malus domestica HOM05D004757 ORTHO05D005743 1.4e-40 169.9 147 64.6
C03p59380 Brassica napus HOM05D004757 ORTHO05D005743 1.8e-40 169.5 134 65.7
C07p03670 Brassica napus HOM05D004757 ORTHO05D005743 1.8e-40 169.5 134 67.2
BolC3t18202H Brassica oleracea HOM05D004757 ORTHO05D005743 1.8e-40 169.5 134 64.9
BolC7t40764H Brassica oleracea HOM05D004757 ORTHO05D005743 1.8e-40 169.5 134 67.2
MELO3C017451.2 Cucumis melo HOM05D004757 ORTHO05D005743 1.8e-40 169.5 120 68.3
Phvul.003G144000 Phaseolus vulgaris HOM05D004757 ORTHO05D005743 1.8e-40 169.5 133 66.9
Glyma.13G097500 Glycine max HOM05D004757 ORTHO05D005743 3.0e-40 168.7 134 67.9
BolC9t54334H Brassica oleracea HOM05D004757 ORTHO05D005743 3.9e-40 168.3 144 65.3
Prupe.1G082700 Prunus persica HOM05D004757 ORTHO05D005743 3.9e-40 168.3 134 68.7
Carub.0003s3315 Capsella rubella HOM05D004757 ORTHO05D005743 5.2e-40 167.9 134 65.7
BraA09t36856Z Brassica rapa HOM05D004757 ORTHO05D005743 1.1e-39 166.8 135 68.9
THA.LOC104803943 Tarenaya hassleriana HOM05D004757 ORTHO05D005743 2.0e-39 166.0 134 63.4
BcaB03g16684 Brassica carinata HOM05D004757 ORTHO05D005743 2.6e-39 165.6 134 65.7
CARHR109470 Cardamine hirsuta HOM05D004757 ORTHO05D005743 2.6e-39 165.6 134 64.9
Gorai.004G027500 Gossypium raimondii HOM05D004757 ORTHO05D005743 2.6e-39 165.6 145 64.1
FAN17G1906 Fragaria x ananassa HOM05D004757 ORTHO05D005743 4.4e-39 164.9 137 65.7
FvH4_4g07900 Fragaria vesca HOM05D004757 ORTHO05D005743 7.4e-39 164.1 142 64.1
Actinidia01305 Actinidia chinensis HOM05D004757 ORTHO05D005743 1.3e-38 163.3 132 65.2
Aa31LG8G16000 Aethionema arabicum HOM05D004757 ORTHO05D005743 1.3e-38 163.3 136 66.2
Gohir.D08G030000 Gossypium hirsutum HOM05D004757 ORTHO05D005743 1.3e-38 163.3 145 63.4
TAR626G1857 Trochodendron aralioides HOM05D004757 ORTHO05D005743 1.3e-38 163.3 139 66.2
C09p14310 Brassica napus HOM05D004757 ORTHO05D005743 1.7e-38 162.9 144 64.6
Gohir.A08G019400 Gossypium hirsutum HOM05D004757 ORTHO05D005743 1.7e-38 162.9 143 64.3
RcHm_v2.0_Chr4g0401201 Rosa chinensis HOM05D004757 ORTHO05D005743 1.7e-38 162.9 141 64.5
Gorai.004G099000 Gossypium raimondii HOM05D004757 ORTHO05D005743 4.8e-38 161.4 130 66.9
BraA07t27976Z Brassica rapa HOM05D004893 ORTHO05D006320 8.2e-38 160.6 115 71.3
MD13G1249500 Malus domestica HOM05D004757 ORTHO05D005743 8.2e-38 160.6 147 61.9
Sp3g32380 Schrenkiella parvula HOM05D004757 ORTHO05D005743 8.2e-38 160.6 134 64.9
Psat4g012760 Pisum sativum HOM05D004757 ORTHO05D005743 1.1e-37 160.2 143 63.6
Lalb_Chr13g0300141 Lupinus albus HOM05D004757 ORTHO05D005743 1.8e-37 159.5 137 62.8
BraA06t26238Z Brassica rapa HOM05D004757 ORTHO05D005743 5.3e-37 157.9 134 61.9
A06p33080 Brassica napus HOM05D004757 ORTHO05D005743 5.9e-36 154.5 131 60.3
Ca_21237_v3 Cicer arietinum L. HOM05D004757 ORTHO05D005743 7.7e-36 154.1 117 70.1
Hma1.2p1_2317F.1_g319740 Hydrangea macrophylla HOM05D004757 ORTHO05D005743 1.0e-35 153.7 134 62.7
BcaC06g36489 Brassica carinata HOM05D004757 ORTHO05D005743 1.3e-35 153.3 114 70.2
Actinidia19844 Actinidia chinensis HOM05D004757 ORTHO05D005743 2.2e-35 152.5 129 64.3
Hma1.2p1_1303F.1_g274440 Hydrangea macrophylla HOM05D004757 ORTHO05D005743 2.9e-35 152.1 155 54.2
THA.LOC104803488 Tarenaya hassleriana HOM05D004757 ORTHO05D005743 3.8e-35 151.8 134 59.7
FAN12G2780 Fragaria x ananassa HOM05D004757 ORTHO05D005743 6.5e-35 151.0 165 55.2
Hma1.2p1_0935F.1_g238550 Hydrangea macrophylla HOM05D004757 ORTHO05D005743 1.5e-34 149.8 134 62.7
FAN07G0988 Fragaria x ananassa HOM05D004757 ORTHO05D005743 2.5e-34 149.1 165 54.5
FAN22G2108 Fragaria x ananassa HOM05D004757 ORTHO05D005743 2.5e-34 149.1 165 54.5
Thhalv10022848m.g Eutrema salsugineum HOM05D004757 ORTHO05D005743 3.2e-34 148.7 134 61.9
PSO170G5353 Papaver somniferum HOM05D004757 ORTHO05D005743 2.7e-33 145.6 181 47.0
VMungo1215G0044 Vigna mungo HOM05D004757 ORTHO05D005743 3.6e-33 145.2 119 63.9
PGR044G0017 Punica granatum HOM05D004757 ORTHO05D005743 4.7e-33 144.8 128 60.2
Ciclev10009829m.g Citrus clementina HOM05D004757 ORTHO05D005743 8.0e-33 144.1 122 64.8
PSO063G6152 Papaver somniferum HOM05D004757 ORTHO05D005743 8.0e-33 144.1 181 46.4
Lalb_Chr12g0199461 Lupinus albus HOM05D004757 ORTHO05D005743 1.0e-32 143.7 138 58.7
EL10Ac8g18296 Beta vulgaris HOM05D004757 ORTHO05D005743 2.3e-32 142.5 133 57.9
Peaxi162Scf01558g00012 Petunia axillaris HOM05D004757 ORTHO05D005743 2.3e-32 142.5 151 51.7
Dinv19553 Davidia involucrata HOM05D004757 ORTHO05D005743 3.0e-32 142.1 126 65.1
Lsat_1_v5_gn_7_54961 Lactuca sativa HOM05D004757 ORTHO05D005743 4.0e-32 141.7 132 59.8
Sc08g0005260 Simmondsia chinensis HOM05D004757 ORTHO05D005743 5.2e-32 141.4 133 55.6
Eucgr.C00145 Eucalyptus grandis HOM05D004757 ORTHO05D005743 8.8e-32 140.6 116 64.7
CANSAT11G1025 Cannabis sativa HOM05D004757 ORTHO05D005743 1.2e-31 140.2 143 57.3
Cc06_g12990 Coffea canephora HOM05D004757 ORTHO05D005743 2.0e-31 139.4 160 53.1
CDE04G2108 Ceratophyllum demersum HOM05D004757 ORTHO05D005743 2.6e-31 139.0 133 58.6
ECA234G2687 Erigeron canadensis HOM05D004757 ORTHO05D005743 3.4e-31 138.7 139 57.6
HanXRQChr09g0244371 Helianthus annuus HOM05D004757 ORTHO05D005743 3.4e-31 138.7 115 61.7
ECA240G0762 Erigeron canadensis HOM05D004757 ORTHO05D005743 4.4e-31 138.3 126 63.5
HanXRQChr09g0254201 Helianthus annuus HOM05D004757 ORTHO05D005743 7.5e-31 137.5 121 62.8
unitig_21.g20652 Utricularia gibba HOM05D004757 ORTHO05D005743 9.7e-31 137.1 144 54.9
Lsat_1_v5_gn_5_85101 Lactuca sativa HOM05D004757 ORTHO05D005743 2.2e-30 136.0 140 55.0
Sabra06G0128000 Salix brachista HOM05D004757 ORTHO05D005743 2.8e-30 135.6 160 54.4
GSVIVG01035530001 Vitis vinifera HOM05D004757 ORTHO05D005743 3.7e-30 135.2 135 54.1
Ah.14g083740 Amaranthus hybridus HOM05D004757 ORTHO05D005743 1.1e-29 133.7 132 56.8
Hund09034 Selenicereus undatus HOM05D004757 ORTHO05D005743 1.4e-29 133.3 130 55.4
TAR383G0800 Trochodendron aralioides HOM05D004757 ORTHO05D005743 1.8e-29 132.9 127 59.1
Aqoxy7G02958 Aquilegia oxysepala HOM05D004757 ORTHO05D005743 2.4e-29 132.5 132 55.3
PGR142G2781 Punica granatum HOM05D004757 ORTHO05D005743 3.1e-29 132.1 157 51.6
ECA236G5014 Erigeron canadensis HOM05D004757 ORTHO05D005743 4.1e-29 131.7 125 56.8
Nn8g40409 Nelumbo nucifera HOM05D004757 ORTHO05D005743 4.1e-29 131.7 157 49.7
Solyc07g006960.3 Solanum lycopersicum HOM05D004757 ORTHO05D005743 5.3e-29 131.3 137 56.2
MBI16_g31788_MAGBIO Magnolia biondii HOM05D004757 ORTHO05D005743 7.0e-29 131.0 147 53.1
Migut.K00229 Erythranthe guttata HOM05D004757 ORTHO05D005743 1.6e-28 129.8 127 55.9
Nitab4.5_0010128g0010 Nicotiana tabacum HOM05D004757 ORTHO05D005743 2.0e-28 129.4 150 48.7
CDE02G3269 Ceratophyllum demersum HOM05D004757 ORTHO05D005743 2.7e-28 129.0 129 55.0
Oeu025694.3 Olea europaea HOM05D004757 ORTHO05D005743 8.5e-27 124.0 129 52.7
Rhsim01G0003200 Rhododendron simsii HOM05D004757 ORTHO05D005743 8.5e-27 124.0 129 56.6
TAR636G1688 Trochodendron aralioides HOM05D004757 ORTHO05D005743 8.5e-27 124.0 120 57.5
Nn2g12725 Nelumbo nucifera HOM05D004757 ORTHO05D005743 1.1e-26 123.6 141 49.6
Sopen07g003050 Solanum pennellii HOM05D004757 ORTHO05D005743 1.1e-26 123.6 134 54.5
Lsat_1_v5_gn_8_68041 Lactuca sativa HOM05D004757 ORTHO05D005743 1.5e-26 123.2 107 62.6
Sabra18G0078100 Salix brachista HOM05D004757 ORTHO05D005743 1.5e-26 123.2 157 51.6
Migut.J01503 Erythranthe guttata HOM05D004757 ORTHO05D005743 1.9e-26 122.9 139 53.2
MSTRG.19719 Avicennia marina HOM05D004757 ORTHO05D005743 4.2e-26 121.7 146 49.3
Eucgr.L02640 Eucalyptus grandis HOM05D004757 ORTHO05D005743 7.2e-26 120.9 110 56.4
DCAR_020127 Daucus carota HOM05D004757 ORTHO05D005743 2.1e-25 119.4 137 52.6
Sc14g0001290 Simmondsia chinensis HOM05D004757 ORTHO05D005743 2.1e-25 119.4 112 55.4
ATR0580G064 Amborella trichopoda HOM05D004757 ORTHO05D005743 3.6e-25 118.6 125 54.4
HanXRQChr05g0142021 Helianthus annuus HOM05D004757 ORTHO05D005743 4.7e-25 118.2 112 56.2
PGSC0003DMG400018757 Solanum tuberosum HOM05D004757 ORTHO05D005743 1.4e-24 116.7 129 55.8
Oeu025209.1 Olea europaea HOM05D004757 ORTHO05D005743 1.8e-24 116.3 130 51.5
SalBow6G1691 Salvia bowleyana HOM05D004757 ORTHO05D005743 3.0e-24 115.5 146 48.6
CSS0012735 Camellia sinensis var. sinensis HOM05D004757 ORTHO05D005743 1.5e-23 113.2 131 51.9
HanXRQChr10g0308501 Helianthus annuus HOM05D004757 ORTHO05D005743 9.8e-23 110.5 142 47.2
CSS0015413 Camellia sinensis var. sinensis HOM05D004757 ORTHO05D005743 1.7e-22 109.8 114 51.8
HPP92_015369 Vanilla planifolia HOM05D004757 ORTHO05D005743 1.7e-22 109.8 147 46.9
ATR0030G045 Amborella trichopoda HOM05D004757 ORTHO05D005743 8.3e-22 107.5 128 50.0
CAN.G1464.4 Capsicum annuum HOM05D004757 ORTHO05D005743 1.8e-21 106.3 124 49.2
SGA_v2.0_scaffold66G22433 Striga asiatica HOM05D004757 ORTHO05D005743 1.8e-21 106.3 112 53.6
vmacro13132 Vaccinium macrocarpon HOM05D004757 ORTHO05D005743 7.0e-21 104.4 168 44.6
MSTRG.6239 Avicennia marina HOM05D004757 ORTHO05D005743 2.7e-20 102.4 132 48.5
Ah.09g229970 Amaranthus hybridus HOM05D004757 ORTHO05D005743 3.8e-19 98.6 146 42.5
Zm00001eb420280 Zea mays HOM05D004757 ORTHO05D005743 4.2e-18 95.1 150 42.0
Peaxi162Scf00200g00183 Petunia axillaris HOM05D004757 ORTHO05D005743 9.5e-18 94.0 93 57.0
Os02g0461900 Oryza sativa ssp. japonica HOM05D004757 ORTHO05D005743 2.8e-17 92.4 176 38.6
Zm00001eb180540 Zea mays HOM05D004757 ORTHO05D005743 2.3e-16 89.4 183 36.6
Zm00001eb236700 Zea mays HOM05D004757 ORTHO05D005743 2.3e-16 89.4 174 37.4
Dinv41223 Davidia involucrata HOM05D004757 ORTHO05D005743 8.9e-16 87.4 103 51.5
Zm00001eb087060 Zea mays HOM05D004757 ORTHO05D005743 2.0e-15 86.3 68 61.8
Peaxi162Scf00200g01819 Petunia axillaris HOM05D004757 ORTHO05D005743 2.2e-14 82.8 90 51.1
AUR62043442 Chenopodium quinoa HOM05D000216 ORTHO05D003518 6.3e-14 81.3 94 43.6
Peaxi162Scf00200g00182 Petunia axillaris HOM05D004757 ORTHO05D005743 9.5e-10 67.4 101 42.6
Cfa005431 Carpinus fangiana HOM05D004757 ORTHO05D125405 1.2e-09 67.0 58 67.2
AUR62021312 Chenopodium quinoa HOM05D004757 ORTHO05D005743 4.7e-09 65.1 90 47.8
Peaxi162Scf00627g00011 Petunia axillaris HOM05D004757 ORTHO05D005743 4.7e-09 65.1 100 42.0
AUR62033229 Chenopodium quinoa HOM05D004757 ORTHO05D005743 1.0e-08 63.9 91 46.2
Nitab4.5_0000957g0030 Nicotiana tabacum HOM05D004757 ORTHO05D005743 6.4e-06 54.7 52 59.6


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