Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 1.7e-177 625.9 326 100.0
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 2.9e-145 518.8 326 83.4
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 7.0e-139 497.7 326 82.2
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 5.9e-130 468.0 331 76.4
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 1.7e-129 466.5 326 76.1
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 7.2e-128 461.1 326 75.8
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 1.2e-127 460.3 325 77.2
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 2.7e-127 459.1 329 76.0
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 3.6e-127 458.8 323 75.5
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 3.0e-126 455.7 326 74.5
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.2e-125 453.8 330 76.7
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 1.2e-125 453.8 330 75.2
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 1.2e-125 453.8 333 74.5
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 5.7e-125 451.4 330 76.4
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 1.7e-124 449.9 327 74.3
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 3.7e-124 448.7 322 75.8
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 4.8e-124 448.4 326 74.8
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 6.3e-124 448.0 326 74.5
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 8.3e-124 447.6 326 73.9
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 1.4e-123 446.8 327 73.4
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 1.4e-123 446.8 321 76.0
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 3.1e-123 445.7 326 74.5
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 4.1e-123 445.3 326 73.3
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 9.1e-123 444.1 326 73.3
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 2.3e-121 439.5 327 71.9
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 3.8e-121 438.7 331 71.3
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 6.5e-121 438.0 325 73.5
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 7.2e-120 434.5 293 77.8
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 2.1e-119 433.0 324 72.8
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 3.6e-119 432.2 332 71.1
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 6.1e-119 431.4 315 75.2
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 8.0e-119 431.0 328 69.8
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 8.0e-119 431.0 331 71.0
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 4.0e-118 428.7 348 68.1
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 6.8e-118 427.9 333 70.3
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 1.2e-117 427.2 324 71.0
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 1.5e-117 426.8 334 71.0
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 1.5e-117 426.8 285 77.2
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 2.0e-117 426.4 322 70.8
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 2.0e-117 426.4 277 80.9
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 2.6e-117 426.0 322 71.7
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 7.5e-117 424.5 322 70.5
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 1.3e-116 423.7 323 70.3
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 2.8e-116 422.5 335 70.1
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 3.7e-116 422.2 261 85.8
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 6.3e-116 421.4 322 70.8
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 1.1e-115 420.6 325 70.5
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.1e-115 420.6 331 70.7
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 1.8e-115 419.9 298 74.5
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 2.4e-115 419.5 323 70.9
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 5.4e-115 418.3 291 77.0
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 5.4e-115 418.3 324 70.1
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 7.0e-115 417.9 371 64.7
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.2e-114 417.2 314 73.6
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 2.7e-114 416.0 353 66.6
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 2.7e-114 416.0 324 69.4
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 3.5e-114 415.6 327 68.2
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 3.5e-114 415.6 322 71.1
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 5.9e-114 414.8 324 70.7
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 2.3e-113 412.9 293 75.4
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 6.6e-113 411.4 324 70.4
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 1.9e-112 409.8 332 69.0
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 5.6e-112 408.3 310 72.6
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 2.1e-111 406.4 249 83.1
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 3.6e-111 405.6 261 81.2
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 4.7e-111 405.2 325 68.9
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 8.0e-111 404.4 259 80.3
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 4.0e-110 402.1 324 68.5
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 8.9e-110 401.0 330 68.5
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 1.5e-109 400.2 324 69.8
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 1.5e-109 400.2 343 66.8
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 2.6e-109 399.4 323 67.8
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 1.7e-108 396.7 292 72.3
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 1.7e-108 396.7 330 66.7
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 3.2e-107 392.5 250 81.6
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 3.2e-107 392.5 330 67.3
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 7.0e-107 391.3 327 66.7
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 4.6e-106 388.7 343 65.0
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 1.3e-105 387.1 321 64.2
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 3.9e-105 385.6 339 63.7
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 6.6e-105 384.8 354 63.6
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 1.1e-104 384.0 236 83.1
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 2.5e-104 382.9 330 65.5
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 1.2e-101 374.0 316 65.2
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 1.5e-101 373.6 238 79.8
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 6.4e-100 368.2 292 68.2
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.2e-95 354.0 250 73.2
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 2.1e-95 353.2 258 74.4
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 3.6e-95 352.4 328 58.5
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 1.7e-92 343.6 332 57.8
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 5.4e-91 338.6 331 58.9
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 6.0e-90 335.1 221 77.4
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 8.6e-89 331.3 266 67.7
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 1.9e-88 330.1 324 59.0
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 1.9e-88 330.1 230 74.3
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 3.3e-88 329.3 235 71.1
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 5.6e-88 328.6 221 77.8
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 1.1e-80 304.3 242 69.0
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 1.9e-80 303.5 216 68.1
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 2.5e-80 303.1 228 71.1
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 2.3e-73 280.0 260 55.0
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 7.6e-69 265.0 260 52.7
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 2.7e-66 256.5 279 49.1
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 9.9e-61 238.0 251 51.4
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 2.7e-58 229.9 253 49.0
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.0e-57 228.0 263 44.9
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.6e-55 220.7 249 50.6
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 4.0e-54 216.1 253 45.5
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 2.0e-53 213.8 129 83.7
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 2.2e-47 193.7 285 40.4
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 4.8e-47 192.6 166 69.9
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 3.3e-40 169.9 249 41.8
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 9.7e-40 168.3 123 72.4
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 9.4e-35 151.8 246 35.4
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 1.8e-25 120.9 318 35.2
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 5.3e-22 109.4 244 29.5
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 8.0e-18 95.5 317 28.7
Atru.chr6.459 Acer truncatum HOM05D006532 ORTHO05D008570 1.2e-08 65.1 146 39.0
PGSC0003DMG401002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 3.7e-07 60.1 85 49.4
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 1.1e-06 58.5 32 90.6
Sc11g0003830 Simmondsia chinensis HOM05D006532 ORTHO05D387458 5.4e-06 56.2 52 55.8


User provided reference genes

Program Settings