Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013300 Carpinus fangiana HOM05D017720 ORTHO05D014169 1.4e-108 396.4 211 100.0
Cfa013256 Carpinus fangiana HOM05D017720 ORTHO05D014169 2.8e-80 302.4 212 79.2
Cfa013255 Carpinus fangiana HOM05D017720 ORTHO05D014169 5.8e-78 294.7 202 81.7
Haze_21674 Corylus avellana HOM05D017720 ORTHO05D014169 2.7e-27 126.3 79 72.2
Haze_21698 Corylus avellana HOM05D017720 ORTHO05D014169 1.3e-24 117.5 120 51.7
Cfa014937 Carpinus fangiana HOM05D017720 ORTHO05D014169 2.1e-19 100.1 123 50.4
TWI53G0929 Tripterygium wilfordii HOM05D000005 ORTHO05D000012 3.0e-18 96.3 130 39.2
QL93p2016_0075 Quercus lobata HOM05D000005 ORTHO05D000012 5.2e-18 95.5 143 42.7
Sed0018635 Sechium edule HOM05D000005 ORTHO05D000012 2.0e-17 93.6 134 41.8
Haze_02546 Corylus avellana HOM05D017720 ORTHO05D014169 4.4e-17 92.4 79 53.2
MELO3C030973.2 Cucumis melo HOM05D000005 ORTHO05D000012 5.7e-17 92.0 136 41.9
Cfa023553 Carpinus fangiana HOM05D016510 ORTHO05D014169 7.5e-17 91.7 148 41.9
CsaV3_3G041210 Cucumis sativus L. HOM05D000005 ORTHO05D000012 3.7e-16 89.4 136 40.4
TWI36G1442 Tripterygium wilfordii HOM05D000005 ORTHO05D000012 2.2e-13 80.1 132 36.4
TWI53G1131 Tripterygium wilfordii HOM05D000005 ORTHO05D000012 3.8e-13 79.3 144 38.2
TWI53G1205 Tripterygium wilfordii HOM05D000005 ORTHO05D000012 1.9e-12 77.0 137 38.7
Sabra19G0014800 Salix brachista HOM05D000005 ORTHO05D010769 1.2e-11 74.3 132 36.4
Sabra19G0005100 Salix brachista HOM05D000005 ORTHO05D001748 3.6e-11 72.8 132 36.4
Psat7g247720 Pisum sativum HOM05D000005 ORTHO05D008900 8.0e-11 71.6 176 33.5
Medtr7g091540 Medicago truncatula HOM05D000005 ORTHO05D000012 4.0e-10 69.3 141 31.2
Potri.019G001600 Populus trichocarpa HOM05D000005 ORTHO05D000012 5.2e-10 68.9 132 35.6
TPR.G31902 Trifolium pratense HOM05D000005 ORTHO05D008900 5.2e-10 68.9 169 29.0
Medtr8g073730 Medicago truncatula HOM05D000005 ORTHO05D000012 6.8e-10 68.6 127 35.4
Nn8g41080 Nelumbo nucifera HOM05D000005 ORTHO05D000012 8.8e-10 68.2 144 33.3
QL93p2016_0111 Quercus lobata HOM05D000005 ORTHO05D013009 8.8e-10 68.2 111 36.9
Potri.019G001602 Populus trichocarpa HOM05D000005 ORTHO05D000012 1.2e-09 67.8 133 34.6
Ca_23200_v3 Cicer arietinum L. HOM05D000005 ORTHO05D008900 1.5e-09 67.4 134 31.3
Medtr6g015505 Medicago truncatula HOM05D000005 ORTHO05D000012 1.5e-09 67.4 129 35.7
Medtr6g015595 Medicago truncatula HOM05D000005 ORTHO05D008900 1.5e-09 67.4 129 35.7
Medtr8g012200 Medicago truncatula HOM05D000005 ORTHO05D000012 1.5e-09 67.4 133 31.6
Medtr2g437560 Medicago truncatula HOM05D000005 ORTHO05D000012 2.0e-09 67.0 132 31.1
Medtr4g014570 Medicago truncatula HOM05D000005 ORTHO05D000012 2.0e-09 67.0 177 28.2
Medtr8g011850 Medicago truncatula HOM05D000005 ORTHO05D000012 2.0e-09 67.0 136 30.9
TPR.G29362 Trifolium pratense HOM05D000005 ORTHO05D000008 2.6e-09 66.6 142 30.3
FvH4_5g32990 Fragaria vesca HOM05D000005 ORTHO05D000012 3.4e-09 66.2 127 36.2
Medtr4g014990 Medicago truncatula HOM05D000005 ORTHO05D000012 3.4e-09 66.2 176 31.2
Medtr4g015060 Medicago truncatula HOM05D000005 ORTHO05D000012 4.4e-09 65.9 175 29.1
TPR.G25388 Trifolium pratense HOM05D000005 ORTHO05D008900 4.4e-09 65.9 132 34.8
Medtr5g036240 Medicago truncatula HOM05D000005 ORTHO05D000012 5.7e-09 65.5 145 29.7
Medtr8g012190 Medicago truncatula HOM05D000005 ORTHO05D000012 7.5e-09 65.1 131 32.8
Psat7g247640 Pisum sativum HOM05D000005 ORTHO05D008900 7.5e-09 65.1 141 32.6
arahy.Tifrunner.gnm1.ann1.3DBB45 Arachis hypogaea HOM05D000005 ORTHO05D000012 9.8e-09 64.7 135 33.3
arahy.Tifrunner.gnm1.ann1.P6IVR8 Arachis hypogaea HOM05D000005 ORTHO05D000012 9.8e-09 64.7 135 33.3
arahy.Tifrunner.gnm1.ann1.QXFT5L Arachis hypogaea HOM05D000005 ORTHO05D000012 9.8e-09 64.7 135 33.3
Psat0s1224g0040 Pisum sativum HOM05D000005 ORTHO05D008900 9.8e-09 64.7 124 31.5
Psat4g205520 Pisum sativum HOM05D000009 ORTHO05D008900 1.3e-08 64.3 219 24.2
TPR.G21181 Trifolium pratense HOM05D000005 ORTHO05D000012 1.3e-08 64.3 141 30.5
Medtr6g016000 Medicago truncatula HOM05D000005 ORTHO05D000012 1.7e-08 63.9 135 32.6
Medtr6g015665 Medicago truncatula HOM05D000005 ORTHO05D000012 2.8e-08 63.2 129 34.9
Glyma.03G075300 Glycine max HOM05D000005 ORTHO05D000012 3.7e-08 62.8 125 36.0
TPR.G16438 Trifolium pratense HOM05D000005 ORTHO05D008900 3.7e-08 62.8 125 32.8
Psat4g206200 Pisum sativum HOM05D000005 ORTHO05D008900 4.8e-08 62.4 133 30.8
TPR.G30618 Trifolium pratense HOM05D000005 ORTHO05D008900 4.8e-08 62.4 130 32.3
Ca_04312_v3 Cicer arietinum L. HOM05D000005 ORTHO05D008900 6.3e-08 62.0 140 32.1
Medtr7g025250 Medicago truncatula HOM05D000005 ORTHO05D000012 6.3e-08 62.0 133 31.6
Psat5g289040 Pisum sativum HOM05D000005 ORTHO05D008900 6.3e-08 62.0 186 28.5
TPR.G31912 Trifolium pratense HOM05D000005 ORTHO05D000008 6.3e-08 62.0 131 32.1
TPR.G4302 Trifolium pratense HOM05D000005 ORTHO05D000012 6.3e-08 62.0 138 34.1
TPR.G25384 Trifolium pratense HOM05D000005 ORTHO05D000012 8.3e-08 61.6 134 29.9
Medtr6g015410 Medicago truncatula HOM05D000005 ORTHO05D000012 1.1e-07 61.2 138 30.4
TPR.G4265 Trifolium pratense HOM05D000005 ORTHO05D008900 1.1e-07 61.2 142 33.1
Lj1g0006454 Lotus japonicus HOM05D000005 ORTHO05D000012 1.4e-07 60.8 130 30.8
Medtr3g104170 Medicago truncatula HOM05D000005 ORTHO05D008900 1.4e-07 60.8 175 30.3
Medtr3g104240 Medicago truncatula HOM05D000005 ORTHO05D008900 1.4e-07 60.8 175 30.3
Medtr8g012080 Medicago truncatula HOM05D000005 ORTHO05D000012 1.4e-07 60.8 146 28.1
RcHm_v2.0_Chr7g0230971 Rosa chinensis HOM05D000005 ORTHO05D000012 1.4e-07 60.8 127 37.0
TPR.G4346 Trifolium pratense HOM05D000005 ORTHO05D008900 1.4e-07 60.8 131 31.3
arahy.Tifrunner.gnm1.ann1.6TY67H Arachis hypogaea HOM05D000005 ORTHO05D000012 1.8e-07 60.5 127 33.1
arahy.Tifrunner.gnm1.ann1.LZY7X8 Arachis hypogaea HOM05D000005 ORTHO05D008900 1.8e-07 60.5 135 34.1
Medtr3g104130 Medicago truncatula HOM05D000005 ORTHO05D008900 1.8e-07 60.5 175 30.3
Medtr3g104210 Medicago truncatula HOM05D000005 ORTHO05D008900 1.8e-07 60.5 175 30.3
THA.LOC104811143 Tarenaya hassleriana HOM05D000005 ORTHO05D000012 1.8e-07 60.5 126 33.3
Medtr6g015430 Medicago truncatula HOM05D000005 ORTHO05D000012 2.4e-07 60.1 125 35.2
Medtr6g015730 Medicago truncatula HOM05D000005 ORTHO05D000012 2.4e-07 60.1 135 32.6
arahy.Tifrunner.gnm1.ann1.2IZ0XP Arachis hypogaea HOM05D000005 ORTHO05D000012 3.1e-07 59.7 126 36.5
arahy.Tifrunner.gnm1.ann1.6223I5 Arachis hypogaea HOM05D000005 ORTHO05D000012 3.1e-07 59.7 141 34.8
Lj3g0018399 Lotus japonicus HOM05D000005 ORTHO05D000012 3.1e-07 59.7 131 32.8
Lj3g0025574 Lotus japonicus HOM05D000005 ORTHO05D008900 4.1e-07 59.3 136 30.9
Ca_04314_v3 Cicer arietinum L. HOM05D000005 ORTHO05D008900 5.4e-07 58.9 144 29.2
Ca_08359_v3 Cicer arietinum L. HOM05D000005 ORTHO05D000012 5.4e-07 58.9 124 35.5
Glyma.03G077400 Glycine max HOM05D000005 ORTHO05D000012 5.4e-07 58.9 144 31.2
Medtr6g015435 Medicago truncatula HOM05D000005 ORTHO05D000012 5.4e-07 58.9 129 34.9
arahy.Tifrunner.gnm1.ann1.G5PK9J Arachis hypogaea HOM05D000005 ORTHO05D008900 7.0e-07 58.5 127 33.1
arahy.Tifrunner.gnm1.ann1.SEB8X5 Arachis hypogaea HOM05D000005 ORTHO05D000012 7.0e-07 58.5 127 33.1
Nn8g40999 Nelumbo nucifera HOM05D000005 ORTHO05D000012 7.0e-07 58.5 132 28.8
TPR.G16431 Trifolium pratense HOM05D000005 ORTHO05D000012 7.0e-07 58.5 136 27.9
Lj3g0025511 Lotus japonicus HOM05D000005 ORTHO05D000012 9.1e-07 58.2 124 28.2
Medtr8g037220 Medicago truncatula HOM05D000005 ORTHO05D000012 9.1e-07 58.2 160 26.9
Psat1g050000 Pisum sativum HOM05D000005 ORTHO05D008900 9.1e-07 58.2 175 26.9
TPR.G4272 Trifolium pratense HOM05D000005 ORTHO05D008900 9.1e-07 58.2 135 32.6
Phvul.010G018400 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 1.2e-06 57.8 122 27.9
arahy.Tifrunner.gnm1.ann1.D4Y0XB Arachis hypogaea HOM05D000005 ORTHO05D000012 1.6e-06 57.4 126 33.3
Medtr6g015455 Medicago truncatula HOM05D000005 ORTHO05D000012 2.0e-06 57.0 124 34.7
Medtr8g012180 Medicago truncatula HOM05D000005 ORTHO05D000012 2.0e-06 57.0 133 29.3
Phvul.010G027232 Phaseolus vulgaris HOM05D000005 ORTHO05D008900 2.0e-06 57.0 122 29.5
RcHm_v2.0_Chr7g0241291 Rosa chinensis HOM05D000005 ORTHO05D000012 2.0e-06 57.0 124 35.5
TPR.G2709 Trifolium pratense HOM05D000005 ORTHO05D000012 2.0e-06 57.0 127 29.9
Medtr5g047530 Medicago truncatula HOM05D000005 ORTHO05D000012 2.7e-06 56.6 125 33.6
Medtr8g011870 Medicago truncatula HOM05D000005 ORTHO05D008900 2.7e-06 56.6 126 31.7
Psat1g049920 Pisum sativum HOM05D000005 ORTHO05D008900 2.7e-06 56.6 175 26.9
Medtr4g020535 Medicago truncatula HOM05D000005 ORTHO05D000012 3.5e-06 56.2 140 31.4
Medtr4g021057 Medicago truncatula HOM05D000005 ORTHO05D000012 3.5e-06 56.2 128 29.7
RcHm_v2.0_Chr4g0412381 Rosa chinensis HOM05D000005 ORTHO05D000012 3.5e-06 56.2 130 33.8
TPR.G2768 Trifolium pratense HOM05D000005 ORTHO05D000012 3.5e-06 56.2 131 30.5
TPR.G4332 Trifolium pratense HOM05D000005 ORTHO05D000012 3.5e-06 56.2 128 31.2
arahy.Tifrunner.gnm1.ann1.4VC79G Arachis hypogaea HOM05D000005 ORTHO05D000012 4.5e-06 55.8 126 32.5
Ca_20327_v3 Cicer arietinum L. HOM05D000005 ORTHO05D008900 4.5e-06 55.8 158 28.5
Medtr4g023400 Medicago truncatula HOM05D000005 ORTHO05D000012 4.5e-06 55.8 134 29.9
Medtr5g047480 Medicago truncatula HOM05D000005 ORTHO05D000012 4.5e-06 55.8 125 31.2
Medtr6g015490 Medicago truncatula HOM05D000005 ORTHO05D000012 4.5e-06 55.8 185 30.8
TPR.G5640 Trifolium pratense HOM05D000005 ORTHO05D008900 4.5e-06 55.8 143 30.1
arahy.Tifrunner.gnm1.ann1.0H6XA2 Arachis hypogaea HOM05D000005 ORTHO05D000012 5.9e-06 55.5 124 34.7
Phvul.010G026800 Phaseolus vulgaris HOM05D000005 ORTHO05D008900 5.9e-06 55.5 122 27.9
Potri.007G099700 Populus trichocarpa HOM05D000005 ORTHO05D000012 5.9e-06 55.5 131 29.0
TPR.G2755 Trifolium pratense HOM05D000005 ORTHO05D008900 5.9e-06 55.5 133 28.6
TPR.G30611 Trifolium pratense HOM05D000005 ORTHO05D008900 5.9e-06 55.5 123 33.3
arahy.Tifrunner.gnm1.ann1.E9SPXB Arachis hypogaea HOM05D000005 ORTHO05D000012 7.7e-06 55.1 125 36.0
Glyma.03G052800 Glycine max HOM05D000005 ORTHO05D000012 7.7e-06 55.1 134 27.6
Glyma.03G054500 Glycine max HOM05D000005 ORTHO05D008900 7.7e-06 55.1 134 28.4
Medtr2g450830 Medicago truncatula HOM05D000005 ORTHO05D000012 7.7e-06 55.1 125 30.4
Medtr6g015680 Medicago truncatula HOM05D000005 ORTHO05D000012 7.7e-06 55.1 128 29.7
Medtr6g015765 Medicago truncatula HOM05D000005 ORTHO05D008900 7.7e-06 55.1 125 32.0
Nn5g27647 Nelumbo nucifera HOM05D000005 ORTHO05D000012 7.7e-06 55.1 135 31.9
Phvul.010G026400 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 7.7e-06 55.1 126 29.4


User provided reference genes

Program Settings