Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013242 Carpinus fangiana HOM05D063909 ORTHO05D004564 5.3e-231 804.7 621 100.0
Haze_21676 Corylus avellana HOM05D063909 ORTHO05D004564 3.7e-200 702.2 623 92.3
CiPaw.07G050600 Carya illinoinensis HOM05D004041 ORTHO05D004564 3.2e-79 300.4 627 48.3
CiPaw.07G215400 Carya illinoinensis HOM05D004041 ORTHO05D004564 3.9e-56 223.8 508 52.2
QL12p024601 Quercus lobata HOM05D004041 ORTHO05D004564 2.8e-38 164.5 689 37.6
Dinv37476 Davidia involucrata HOM05D000079 ORTHO05D000211 1.2e-20 105.9 213 39.0
Actinidia12476 Actinidia chinensis HOM05D004041 ORTHO05D004564 2.1e-17 95.1 600 35.8
CSS0017741 Camellia sinensis var. sinensis HOM05D004041 ORTHO05D004564 6.0e-17 93.6 324 32.7
Sabra06G0181500 Salix brachista HOM05D004041 ORTHO05D004564 1.3e-11 75.9 640 30.2
Manes.03G046500 Manihot esculenta HOM05D004041 ORTHO05D004564 3.8e-11 74.3 68 60.3
Glyma.14G131900 Glycine max HOM05D004041 ORTHO05D004564 5.5e-10 70.5 164 37.2
Dinv09449 Davidia involucrata HOM05D003985 ORTHO05D005253 9.3e-10 69.7 628 27.9
MD15G1111100 Malus domestica HOM05D004041 ORTHO05D004564 2.1e-09 68.6 103 59.2
Prupe.1G463200 Prunus persica HOM05D004041 ORTHO05D004564 6.7e-08 63.5 66 53.0
Sed0021561 Sechium edule HOM05D004041 ORTHO05D004564 6.7e-08 63.5 100 41.0
Lj8C419G2 Lonicera japonica HOM05D004041 ORTHO05D004564 3.3e-07 61.2 308 27.6
CANSAT21G2467 Cannabis sativa HOM05D004041 ORTHO05D004564 4.3e-07 60.8 99 53.5
Phvul.006G038688 Phaseolus vulgaris HOM05D004041 ORTHO05D004564 1.6e-06 58.9 162 35.2
vmacro00641 Vaccinium macrocarpon HOM05D009134 ORTHO05D011284 2.8e-06 58.2 302 29.5


User provided reference genes

Program Settings