Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013238 Carpinus fangiana HOM05D005271 ORTHO05D006072 1.5e-50 202.6 104 100.0
Haze_05234 Corylus avellana HOM05D000011 ORTHO05D000157 2.5e-10 68.9 38 89.5
Cfa001130 Carpinus fangiana HOM05D005271 ORTHO05D006072 1.4e-08 63.2 37 83.8
CiPaw.09G137400 Carya illinoinensis HOM05D005271 ORTHO05D006072 3.1e-08 62.0 41 73.2
Rhsim04G0167900 Rhododendron simsii HOM05D005271 ORTHO05D006072 1.5e-07 59.7 40 70.0
Rhsim12G0144200 Rhododendron simsii HOM05D005271 ORTHO05D006072 1.5e-07 59.7 40 70.0
CANSAT25G1004 Cannabis sativa HOM05D005271 ORTHO05D006072 3.4e-07 58.5 33 81.8
Dinv31186 Davidia involucrata HOM05D005271 ORTHO05D006072 4.5e-07 58.2 33 81.8
Thhalv10017819m.g Eutrema salsugineum HOM05D005271 ORTHO05D006072 4.5e-07 58.2 72 44.4
vmacro03554 Vaccinium macrocarpon HOM05D005271 ORTHO05D006072 4.5e-07 58.2 38 71.1
QL11p012305 Quercus lobata HOM05D005271 ORTHO05D006072 7.7e-07 57.4 33 81.8
CSS0040197 Camellia sinensis var. sinensis HOM05D005271 ORTHO05D006072 1.3e-06 56.6 37 70.3
AT1G05780 Arabidopsis thaliana HOM05D005271 ORTHO05D006072 1.7e-06 56.2 37 73.0
Nn7g38328 Nelumbo nucifera HOM05D005271 ORTHO05D006072 1.7e-06 56.2 37 67.6
Cpa.g.sc51.137 Carica papaya HOM05D005271 ORTHO05D006072 2.2e-06 55.8 33 75.8
Duzib212G0597 Durio zibethinus HOM05D005271 ORTHO05D006072 2.2e-06 55.8 35 77.1
Gohir.A09G226900 Gossypium hirsutum HOM05D005271 ORTHO05D006072 2.2e-06 55.8 30 86.7
Gohir.D09G227900 Gossypium hirsutum HOM05D005271 ORTHO05D006072 2.2e-06 55.8 30 86.7
Gorai.006G250600 Gossypium raimondii HOM05D005271 ORTHO05D006072 2.2e-06 55.8 30 86.7
C04p18180 Brassica napus HOM05D005271 ORTHO05D006072 3.8e-06 55.1 37 67.6
BolC4t23374H Brassica oleracea HOM05D005271 ORTHO05D006072 3.8e-06 55.1 37 67.6
Carub.0004s1300 Capsella rubella HOM05D005271 ORTHO05D006072 5.0e-06 54.7 37 67.6
FAN21G0135 Fragaria x ananassa HOM05D005271 ORTHO05D006072 5.0e-06 54.7 36 69.4
Oeu021212.1 Olea europaea HOM05D005271 ORTHO05D006072 5.0e-06 54.7 37 67.6
BcaB06g28531 Brassica carinata HOM05D005271 ORTHO05D006072 6.5e-06 54.3 37 70.3
C04p60870 Brassica napus HOM05D005271 ORTHO05D006072 6.5e-06 54.3 37 70.3
BolC4t27578H Brassica oleracea HOM05D005271 ORTHO05D006072 6.5e-06 54.3 37 70.3
BraA04t17934Z Brassica rapa HOM05D005271 ORTHO05D006072 6.5e-06 54.3 37 70.3
Thecc.04G266100 Theobroma cacao HOM05D005271 ORTHO05D006072 6.5e-06 54.3 31 74.2
AL1G15680 Arabidopsis lyrata HOM05D005271 ORTHO05D006072 8.5e-06 53.9 37 70.3
arahy.Tifrunner.gnm1.ann1.31Z3CL Arachis hypogaea HOM05D005271 ORTHO05D006072 8.5e-06 53.9 39 71.8
BcaC02g11279 Brassica carinata HOM05D005271 ORTHO05D006072 8.5e-06 53.9 37 64.9
A04p24140 Brassica napus HOM05D005271 ORTHO05D006072 8.5e-06 53.9 33 75.8
Ciclev10017270m.g Citrus clementina HOM05D005271 ORTHO05D006072 8.5e-06 53.9 33 72.7


User provided reference genes

Program Settings