Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013209 Carpinus fangiana HOM05D000175 ORTHO05D010751 5.8e-230 801.6 832 100.0
Haze_21622 Corylus avellana HOM05D000175 ORTHO05D010751 2.1e-115 421.0 219 97.7
CiPaw.07G217800 Carya illinoinensis HOM05D000175 ORTHO05D010751 1.9e-63 248.4 157 74.5
QL12p031294 Quercus lobata HOM05D000175 ORTHO05D010751 1.1e-60 239.2 151 76.2
MD14G1075600 Malus domestica HOM05D000175 ORTHO05D010751 3.5e-54 217.6 205 57.1
Actinidia13289 Actinidia chinensis HOM05D000175 ORTHO05D010751 4.3e-52 210.7 157 68.2
Thecc.09G144200 Theobroma cacao HOM05D000175 ORTHO05D010751 1.4e-50 205.7 163 62.0
ClCG08G012890 Citrullus lanatus HOM05D000175 ORTHO05D010751 5.3e-50 203.8 213 47.9
Hma1.2p1_0003F.1_g003660 Hydrangea macrophylla HOM05D000175 ORTHO05D010751 4.2e-47 194.1 132 69.7
Dinv29350 Davidia involucrata HOM05D000175 ORTHO05D010751 5.1e-45 187.2 134 66.4
COL.COLO4_24065 Corchorus olitorius HOM05D000175 ORTHO05D010751 2.0e-44 185.3 160 60.0
Manes.03G064701 Manihot esculenta HOM05D000175 ORTHO05D010751 8.2e-43 179.9 158 57.6
Gohir.D06G047801 Gossypium hirsutum HOM05D000175 ORTHO05D010751 2.6e-41 174.9 167 52.7
Gorai.010G053600 Gossypium raimondii HOM05D000175 ORTHO05D010751 2.6e-41 174.9 167 52.7
Prupe.1G189500 Prunus persica HOM05D000175 ORTHO05D010751 1.0e-40 172.9 224 44.2
Cc08_g08310 Coffea canephora HOM05D000175 ORTHO05D010751 1.1e-39 169.5 155 53.5
TAR629G1788 Trochodendron aralioides HOM05D000175 ORTHO05D010751 6.1e-38 163.7 157 54.8
Gohir.A11G252600 Gossypium hirsutum HOM05D000175 ORTHO05D010751 3.3e-36 157.9 162 50.6
THA.LOC104820394 Tarenaya hassleriana HOM05D000175 ORTHO05D010751 3.3e-36 157.9 183 47.5
Cpa.g.sc91.9 Carica papaya HOM05D000175 ORTHO05D010751 6.3e-35 153.7 145 53.8
TWI32G0171 Tripterygium wilfordii HOM05D000175 ORTHO05D010751 1.4e-34 152.5 134 57.5
TAR636G0303 Trochodendron aralioides HOM05D000175 ORTHO05D010751 2.2e-32 145.2 130 54.6
Eucgr.H04959 Eucalyptus grandis HOM05D000175 ORTHO05D010751 3.8e-32 144.4 134 58.2
Duzib150G0592 Durio zibethinus HOM05D000175 ORTHO05D010751 1.5e-31 142.5 107 63.6
CDE06G1344 Ceratophyllum demersum HOM05D000175 ORTHO05D010751 4.2e-31 141.0 182 42.9
Migut.A00274 Erythranthe guttata HOM05D000175 ORTHO05D010751 9.4e-31 139.8 147 51.0
Duzib187G1137 Durio zibethinus HOM05D000175 ORTHO05D010751 1.8e-29 135.6 167 47.3
MBI17_g42672_MAGBIO Magnolia biondii HOM05D000175 ORTHO05D010751 1.8e-29 135.6 163 45.4
Sc12g0005540 Simmondsia chinensis HOM05D000175 ORTHO05D010751 2.3e-29 135.2 150 45.3
MSTRG.11739 Avicennia marina HOM05D000175 ORTHO05D010751 1.1e-28 132.9 110 58.2
CANSAT80G2846 Cannabis sativa HOM05D000175 ORTHO05D010751 1.7e-27 129.0 157 46.5
PGR102G0839 Punica granatum HOM05D000175 ORTHO05D010751 2.8e-27 128.3 165 45.5
Rhsim02G0187200 Rhododendron simsii HOM05D000175 ORTHO05D010751 4.8e-27 127.5 155 48.4
SHI18614 Sapria himalayana HOM05D000175 ORTHO05D010751 2.4e-26 125.2 154 46.1
SGA_v2.0_scaffold27G11490 Striga asiatica HOM05D000175 ORTHO05D010751 9.1e-26 123.2 106 56.6
SalBow4G3013 Salvia bowleyana HOM05D000175 ORTHO05D010751 8.0e-22 110.2 100 54.0
Aqoxy1G00639 Aquilegia oxysepala HOM05D000175 ORTHO05D010751 4.4e-20 104.4 150 37.3
DCAR_022873 Daucus carota HOM05D000175 ORTHO05D010751 2.4e-18 98.6 221 29.9
Gohir.A09G065401 Gossypium hirsutum HOM05D000175 ORTHO05D010751 5.0e-16 90.9 90 52.2
Gohir.A13G164950 Gossypium hirsutum HOM05D000175 ORTHO05D010751 5.0e-08 64.3 65 52.3


User provided reference genes

Program Settings