Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013203 Carpinus fangiana HOM05D007454 ORTHO05D009382 1.1e-80 303.1 144 100.0
Haze_21608 Corylus avellana HOM05D007454 ORTHO05D009382 3.5e-66 255.0 147 85.0
QL12p031592 Quercus lobata HOM05D007454 ORTHO05D009382 1.2e-37 160.2 151 57.6
RcHm_v2.0_Chr6g0298931 Rosa chinensis HOM05D007454 ORTHO05D009382 1.3e-36 156.8 150 58.0
FvH4_2g29860 Fragaria vesca HOM05D007454 ORTHO05D009382 2.2e-36 156.0 151 57.0
FAN27G1093 Fragaria x ananassa HOM05D007454 ORTHO05D009382 4.9e-36 154.8 150 56.7
CSS0001844 Camellia sinensis var. sinensis HOM05D007454 ORTHO05D009382 7.1e-35 151.0 146 54.8
FAN20G1122 Fragaria x ananassa HOM05D007454 ORTHO05D009382 9.2e-35 150.6 147 56.5
FAN24G1693 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.6e-34 149.8 151 55.0
FAN15G1931 Fragaria x ananassa HOM05D007454 ORTHO05D009382 2.1e-34 149.4 150 56.7
TWI34G0809 Tripterygium wilfordii HOM05D007454 ORTHO05D009382 5.1e-33 144.8 148 54.7
Potri.006G248300 Populus trichocarpa HOM05D007454 ORTHO05D009382 1.2e-31 140.2 144 54.2
CiPaw.08G014500 Carya illinoinensis HOM05D007454 ORTHO05D009382 2.1e-31 139.4 160 55.0
Actinidia29311 Actinidia chinensis HOM05D007454 ORTHO05D009382 2.4e-30 136.0 144 51.4
MD15G1117600 Malus domestica HOM05D007454 ORTHO05D009382 2.4e-30 136.0 157 52.2
Rhsim02G0189300 Rhododendron simsii HOM05D007454 ORTHO05D009382 2.4e-30 136.0 144 52.1
Thecc.09G146500 Theobroma cacao HOM05D007454 ORTHO05D009382 3.1e-30 135.6 145 51.7
Sabra06G0194300 Salix brachista HOM05D007454 ORTHO05D009382 4.0e-30 135.2 144 52.1
Gorai.007G350400 Gossypium raimondii HOM05D007454 ORTHO05D009382 6.8e-30 134.4 153 52.3
CiPaw.07G219000 Carya illinoinensis HOM05D007454 ORTHO05D009382 8.9e-30 134.0 162 53.7
Gohir.A11G304800 Gossypium hirsutum HOM05D007454 ORTHO05D009382 3.4e-29 132.1 153 52.3
Manes.03G018900 Manihot esculenta HOM05D007454 ORTHO05D009382 3.4e-29 132.1 146 54.1
Prupe.1G471000 Prunus persica HOM05D007454 ORTHO05D009382 3.4e-29 132.1 147 51.7
Gohir.D11G320200 Gossypium hirsutum HOM05D007454 ORTHO05D009382 4.4e-29 131.7 152 52.0
Atru.chr7.2345 Acer truncatum HOM05D007454 ORTHO05D009382 1.3e-28 130.2 149 51.7
Actinidia13275 Actinidia chinensis HOM05D007454 ORTHO05D009382 6.4e-28 127.9 143 49.0
Manes.16G117700 Manihot esculenta HOM05D007454 ORTHO05D009382 1.2e-26 123.6 155 48.4
Solyc08g067630.3 Solanum lycopersicum HOM05D007454 ORTHO05D009382 2.7e-26 122.5 150 44.7
MD08G1140700 Malus domestica HOM05D007454 ORTHO05D009382 6.0e-26 121.3 157 48.4
Hund25693 Selenicereus undatus HOM05D007454 ORTHO05D009382 1.0e-25 120.6 159 44.7
TAR383G0100 Trochodendron aralioides HOM05D007454 ORTHO05D009382 3.0e-25 119.0 145 47.6
Nitab4.5_0000125g0360 Nicotiana tabacum HOM05D007454 ORTHO05D009382 3.9e-25 118.6 144 46.5
Nitab4.5_0003201g0010 Nicotiana tabacum HOM05D007454 ORTHO05D009382 5.1e-25 118.2 145 47.6
TAR626G1515 Trochodendron aralioides HOM05D007454 ORTHO05D009382 1.1e-24 117.1 140 47.1
CAN.G506.13 Capsicum annuum HOM05D007454 ORTHO05D009382 3.3e-24 115.5 144 43.1
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 7.3e-24 114.4 152 45.4
Ciclev10009811m.g Citrus clementina HOM05D007454 ORTHO05D009382 9.6e-24 114.0 146 46.6
PGSC0003DMG400002261 Solanum tuberosum HOM05D007454 ORTHO05D009382 9.6e-24 114.0 151 41.7
Duzib150G0674 Durio zibethinus HOM05D007454 ORTHO05D009382 1.2e-23 113.6 109 55.0
EL10Ac2g02557 Beta vulgaris HOM05D007454 ORTHO05D009382 1.6e-23 113.2 157 42.7
Cc11_g01380 Coffea canephora HOM05D007454 ORTHO05D009382 1.6e-23 113.2 155 44.5
DCAR_001472 Daucus carota HOM05D007454 ORTHO05D009382 1.6e-23 113.2 145 42.1
Lsat_1_v5_gn_1_45380 Lactuca sativa HOM05D007454 ORTHO05D009382 2.1e-23 112.8 144 45.1
Aqoxy7G01923 Aquilegia oxysepala HOM05D007454 ORTHO05D009382 4.7e-23 111.7 143 46.9
HanXRQChr01g0030031 Helianthus annuus HOM05D007454 ORTHO05D009382 4.7e-23 111.7 150 46.7
COL.COLO4_24027 Corchorus olitorius HOM05D007454 ORTHO05D009382 1.8e-22 109.8 147 47.6
Nn2g11862 Nelumbo nucifera HOM05D007454 ORTHO05D009382 4.0e-22 108.6 158 41.8
Glyma.06G072000 Glycine max HOM05D007454 ORTHO05D009382 6.9e-22 107.8 148 47.3
Dinv11595 Davidia involucrata HOM05D007454 ORTHO05D009382 9.0e-22 107.5 106 53.8
ECA248G0251 Erigeron canadensis HOM05D007454 ORTHO05D009382 7.6e-21 104.4 148 42.6
unitig_748.g8205 Utricularia gibba HOM05D007454 ORTHO05D009382 1.3e-20 103.6 141 42.6
Medtr3g107890 Medicago truncatula HOM05D007454 ORTHO05D009382 1.7e-20 103.2 162 45.7
arahy.Tifrunner.gnm1.ann1.X4UCF1 Arachis hypogaea HOM05D007454 ORTHO05D009382 1.1e-19 100.5 158 43.7
Oeu032495.1 Olea europaea HOM05D007454 ORTHO05D009382 1.1e-19 100.5 143 43.4
Lalb_Chr23g0268861 Lupinus albus HOM05D007454 ORTHO05D009382 9.3e-19 97.4 156 39.7
Phvul.009G096400 Phaseolus vulgaris HOM05D007454 ORTHO05D009382 1.6e-18 96.7 138 45.7
arahy.Tifrunner.gnm1.ann1.AC8RV3 Arachis hypogaea HOM05D007454 ORTHO05D009382 2.7e-18 95.9 159 42.8
ClCG05G017140 Citrullus lanatus HOM05D007454 ORTHO05D009382 2.7e-18 95.9 150 41.3
Lj1g0018180 Lotus japonicus HOM05D007454 ORTHO05D009382 2.7e-18 95.9 162 40.1
Sc09g0008740 Simmondsia chinensis HOM05D007454 ORTHO05D009382 3.5e-18 95.5 150 42.0
Ca_15708_v3 Cicer arietinum L. HOM05D007454 ORTHO05D009382 6.0e-18 94.7 164 39.0
Glyma.04G070000 Glycine max HOM05D007454 ORTHO05D009382 6.0e-18 94.7 151 43.7
Eucgr.C01807 Eucalyptus grandis HOM05D007454 ORTHO05D009382 7.8e-18 94.4 154 40.9
CARHR115660 Cardamine hirsuta HOM05D007454 ORTHO05D009382 1.3e-17 93.6 152 40.8
THA.LOC104803822 Tarenaya hassleriana HOM05D007454 ORTHO05D009382 1.1e-16 90.5 145 40.0
VMungo1309G0733 Vigna mungo HOM05D007454 ORTHO05D009382 2.5e-16 89.4 119 46.2
Sp4g05200 Schrenkiella parvula HOM05D007454 ORTHO05D009382 3.3e-16 89.0 143 39.9
Sed0003243 Sechium edule HOM05D007454 ORTHO05D009382 4.3e-16 88.6 159 34.0
AL4G17110 Arabidopsis lyrata HOM05D007454 ORTHO05D009382 5.6e-16 88.2 148 40.5
Cpa.g.sc603.1 Carica papaya HOM05D007454 ORTHO05D009382 5.6e-16 88.2 145 40.7
ClCG08G012990 Citrullus lanatus HOM05D007454 ORTHO05D009382 5.6e-16 88.2 148 35.1
Sopen08g021580 Solanum pennellii HOM05D007454 ORTHO05D009382 5.6e-16 88.2 103 44.7
AT2G25625 Arabidopsis thaliana HOM05D007454 ORTHO05D009382 9.6e-16 87.4 151 42.4
Thhalv10000347m.g Eutrema salsugineum HOM05D007454 ORTHO05D009382 9.6e-16 87.4 148 39.9
TPR.G27330 Trifolium pratense HOM05D007454 ORTHO05D009382 9.6e-16 87.4 174 38.5
PSO170G5517 Papaver somniferum HOM05D007454 ORTHO05D009382 2.1e-15 86.3 162 37.0
PSO017G6963 Papaver somniferum HOM05D007454 ORTHO05D009382 2.8e-15 85.9 163 37.4
SalBow4G3079 Salvia bowleyana HOM05D007454 ORTHO05D009382 4.8e-15 85.1 62 62.9
Sed0012550 Sechium edule HOM05D007454 ORTHO05D009382 4.8e-15 85.1 148 37.8
CsaV3_2G031720 Cucumis sativus L. HOM05D007454 ORTHO05D009382 8.1e-15 84.3 119 40.3
MELO3C011223.2 Cucumis melo HOM05D007454 ORTHO05D009382 1.8e-14 83.2 112 40.2
MELO3C003676.2 Cucumis melo HOM05D007454 ORTHO05D009382 6.9e-14 81.3 153 37.9
TPR.G34694 Trifolium pratense HOM05D007454 ORTHO05D009382 6.9e-14 81.3 158 39.2
BraA04t17571Z Brassica rapa HOM05D007454 ORTHO05D009382 2.0e-13 79.7 147 38.1
BcaB06g28081 Brassica carinata HOM05D007454 ORTHO05D009382 3.4e-13 79.0 147 36.7
Carub.0004s0541 Capsella rubella HOM05D007454 ORTHO05D009382 3.4e-13 79.0 144 38.2
A04p19830 Brassica napus HOM05D007454 ORTHO05D009382 4.5e-13 78.6 147 37.4
CsaV3_3G046620 Cucumis sativus L. HOM05D007454 ORTHO05D009382 4.5e-13 78.6 159 36.5
Sed0011711 Sechium edule HOM05D007454 ORTHO05D009382 5.8e-13 78.2 134 38.8
MBI01_g03566_MAGBIO Magnolia biondii HOM05D007454 ORTHO05D009382 9.9e-13 77.4 112 38.4
Zm00001eb296620 Zea mays HOM05D007454 ORTHO05D009382 8.4e-12 74.3 114 36.0
BcaC02g08336 Brassica carinata HOM05D007454 ORTHO05D009382 1.4e-11 73.6 147 36.1
C04p55570 Brassica napus HOM05D007454 ORTHO05D009382 1.4e-11 73.6 147 36.1
BolC4t27081H Brassica oleracea HOM05D007454 ORTHO05D009382 1.4e-11 73.6 147 36.1
Aa31LG1G8530 Aethionema arabicum HOM05D007454 ORTHO05D009382 1.9e-11 73.2 113 38.1
Psat5g027000 Pisum sativum HOM05D007454 ORTHO05D009382 7.1e-11 71.2 77 45.5
CDE06G2386 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 1.6e-10 70.1 116 39.7
ATR0083G010 Amborella trichopoda HOM05D007454 ORTHO05D009382 4.6e-10 68.6 143 34.3
CDE07G1568 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 7.9e-10 67.8 128 40.6
ATR0260G001 Amborella trichopoda HOM05D007454 ORTHO05D009382 2.3e-09 66.2 121 35.5
CDE06G2168 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 6.7e-09 64.7 67 46.3
CANSAT11G0218 Cannabis sativa HOM05D007454 ORTHO05D009382 3.3e-08 62.4 153 32.7
Os05g0575000 Oryza sativa ssp. japonica HOM05D007454 ORTHO05D009382 7.4e-08 61.2 33 75.8


User provided reference genes

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