Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013175 Carpinus fangiana HOM05D008288 ORTHO05D010469 1.8e-117 426.0 223 100.0
Thecc.09G149300 Theobroma cacao HOM05D008288 ORTHO05D010469 1.3e-67 260.4 234 63.7
QL02p022482 Quercus lobata HOM05D008288 ORTHO05D010469 3.5e-65 252.3 217 66.4
COL.COLO4_23981 Corchorus olitorius HOM05D008288 ORTHO05D010469 7.8e-65 251.1 235 63.4
Hma1.2p1_0000F.1_g000730 Hydrangea macrophylla HOM05D008288 ORTHO05D010469 5.0e-64 248.4 217 65.0
Actinidia22367 Actinidia chinensis HOM05D008288 ORTHO05D010469 1.1e-63 247.3 217 63.1
MD15G1120900 Malus domestica HOM05D008288 ORTHO05D010469 1.5e-63 246.9 234 62.8
Potri.006G251000 Populus trichocarpa HOM05D008288 ORTHO05D010469 1.5e-63 246.9 234 61.1
Gohir.A05G047000 Gossypium hirsutum HOM05D008288 ORTHO05D010469 7.3e-63 244.6 235 61.7
Gorai.009G050100 Gossypium raimondii HOM05D008288 ORTHO05D010469 9.5e-63 244.2 218 65.1
Gohir.D05G048766 Gossypium hirsutum HOM05D008288 ORTHO05D010469 1.2e-62 243.8 235 61.7
Eucgr.C01784 Eucalyptus grandis HOM05D008288 ORTHO05D010469 1.4e-61 240.4 217 63.1
RcHm_v2.0_Chr6g0298581 Rosa chinensis HOM05D008288 ORTHO05D010469 1.8e-61 240.0 234 63.2
FAN15G2470 Fragaria x ananassa HOM05D008288 ORTHO05D010469 4.0e-61 238.8 234 62.0
Duzib150G0406 Durio zibethinus HOM05D008288 ORTHO05D010469 8.9e-61 237.7 234 60.7
FAN27G1450 Fragaria x ananassa HOM05D008288 ORTHO05D010469 1.2e-60 237.3 234 61.5
TWI34G1005 Tripterygium wilfordii HOM05D008288 ORTHO05D010469 1.5e-60 236.9 217 65.9
Peaxi162Scf00341g00011 Petunia axillaris HOM05D008288 ORTHO05D010469 3.4e-60 235.7 218 60.6
FvH4_2g29591 Fragaria vesca HOM05D008288 ORTHO05D010469 4.4e-60 235.3 234 61.5
TAR625G1133 Trochodendron aralioides HOM05D008288 ORTHO05D010469 5.8e-60 235.0 215 61.4
Nitab4.5_0015147g0010 Nicotiana tabacum HOM05D008288 ORTHO05D010469 9.8e-60 234.2 216 61.1
DCAR_007695 Daucus carota HOM05D008288 ORTHO05D010469 2.9e-59 232.6 219 61.2
PGR031G1353 Punica granatum HOM05D008288 ORTHO05D010469 3.7e-59 232.3 218 61.9
CSS0049569 Camellia sinensis var. sinensis HOM05D008288 ORTHO05D010469 8.3e-59 231.1 212 63.2
Cpa.g.sc91.46 Carica papaya HOM05D008288 ORTHO05D010469 8.3e-59 231.1 216 64.4
Atru.chr7.2381 Acer truncatum HOM05D008288 ORTHO05D010469 7.0e-58 228.0 217 61.8
Nitab4.5_0000151g0060 Nicotiana tabacum HOM05D008288 ORTHO05D010469 7.0e-58 228.0 218 58.7
Haze_21560 Corylus avellana HOM05D008288 ORTHO05D010469 1.6e-57 226.9 217 66.8
Sed0020459 Sechium edule HOM05D008288 ORTHO05D010469 2.0e-57 226.5 215 60.9
Ciclev10010324m.g Citrus clementina HOM05D008288 ORTHO05D010469 2.7e-57 226.1 217 61.3
Sopen08g021110 Solanum pennellii HOM05D008288 ORTHO05D010469 6.0e-57 224.9 215 59.1
CsaV3_3G046560 Cucumis sativus L. HOM05D008288 ORTHO05D010469 1.0e-56 224.2 217 60.4
Glyma.04G068600 Glycine max HOM05D008288 ORTHO05D010469 1.7e-56 223.4 216 61.1
Solyc08g067170.3 Solanum lycopersicum HOM05D008288 ORTHO05D010469 2.3e-56 223.0 215 58.6
MD08G1145200 Malus domestica HOM05D008288 ORTHO05D010469 3.9e-56 222.2 234 59.4
ClCG05G017080 Citrullus lanatus HOM05D008288 ORTHO05D010469 1.9e-55 219.9 217 59.9
Psat0ss3186g0240 Pisum sativum HOM05D008288 ORTHO05D010469 2.5e-55 219.5 223 59.2
Ca_15724_v3 Cicer arietinum L. HOM05D008288 ORTHO05D010469 3.3e-55 219.2 219 58.9
Medtr3g107650 Medicago truncatula HOM05D008288 ORTHO05D010469 5.6e-55 218.4 220 59.1
TPR.G31773 Trifolium pratense HOM05D008288 ORTHO05D010469 1.2e-54 217.2 221 59.3
Aqoxy7G02071 Aquilegia oxysepala HOM05D008288 ORTHO05D010469 2.8e-54 216.1 212 58.0
Phvul.009G095100 Phaseolus vulgaris HOM05D008288 ORTHO05D010469 6.2e-54 214.9 217 59.0
MBI04_g10412_MAGBIO Magnolia biondii HOM05D008288 ORTHO05D010469 8.1e-54 214.5 209 58.9
CAN.G348.1 Capsicum annuum HOM05D008288 ORTHO05D010469 1.1e-53 214.2 215 56.7
Migut.A00319 Erythranthe guttata HOM05D008288 ORTHO05D010469 1.1e-53 214.2 217 58.1
Lj1g0026401 Lotus japonicus HOM05D008288 ORTHO05D010469 2.3e-53 213.0 221 58.4
VMungo1309G1559 Vigna mungo HOM05D008288 ORTHO05D010469 5.2e-53 211.8 217 59.4
Prupe.1G473500 Prunus persica HOM05D008288 ORTHO05D010469 9.8e-52 207.6 235 57.0
SalBow4G3001 Salvia bowleyana HOM05D008288 ORTHO05D010469 2.2e-51 206.5 236 53.0
Lsat_1_v5_gn_1_45101 Lactuca sativa HOM05D008288 ORTHO05D010469 1.1e-45 187.6 206 54.9
PSO455G0067 Papaver somniferum HOM05D008288 ORTHO05D010469 1.1e-42 177.6 226 49.6
Dinv11620 Davidia involucrata HOM05D008288 ORTHO05D010469 2.4e-42 176.4 127 74.8
PSO170G5425 Papaver somniferum HOM05D008288 ORTHO05D010469 2.1e-41 173.3 225 49.3
MELO3C003683.2 Cucumis melo HOM05D008288 ORTHO05D010469 6.6e-40 168.3 202 52.0
Manes.16G119800 Manihot esculenta HOM05D008288 ORTHO05D010469 1.1e-37 161.0 217 50.7
Dinv30173 Davidia involucrata HOM05D008288 ORTHO05D010469 4.2e-34 149.1 196 51.0
CANSAT54G0155 Cannabis sativa HOM05D008288 ORTHO05D010469 1.5e-23 114.0 123 52.8
ATR0815G056 Amborella trichopoda HOM05D008288 ORTHO05D010469 6.0e-17 92.0 192 39.1
Cfa000298 Carpinus fangiana HOM05D000215 ORTHO05D007108 5.7e-07 58.9 147 32.0
Haze_06635 Corylus avellana HOM05D000215 ORTHO05D007108 5.7e-07 58.9 147 32.0
Haze_06646 Corylus avellana HOM05D000215 ORTHO05D007108 5.7e-07 58.9 147 32.0
Lalb_Chr20g0122541 Lupinus albus HOM05D000215 ORTHO05D007108 9.6e-07 58.2 202 28.2
Glyma.13G249400 Glycine max HOM05D000215 ORTHO05D007108 1.3e-06 57.8 142 33.1
SEGI_16453 Sequoiadendron giganteum HOM05D008288 ORTHO05D010469 6.3e-06 55.5 206 27.7


User provided reference genes

Program Settings