Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013053 Carpinus fangiana HOM05D015741 ORTHO05D020359 1.9e-181 639.0 317 100.0
Cfa001924 Carpinus fangiana HOM05D015741 ORTHO05D020359 1.8e-155 552.7 321 85.7
Cfa019984 Carpinus fangiana HOM05D015741 ORTHO05D020359 2.3e-134 482.6 312 79.2
Cfa001696 Carpinus fangiana HOM05D015741 ORTHO05D020359 1.2e-106 390.6 312 66.3
Cfa002126 Carpinus fangiana HOM05D015741 ORTHO05D020359 1.9e-40 170.6 316 35.4
Cfa015161 Carpinus fangiana HOM05D015741 ORTHO05D020359 2.9e-33 146.7 235 39.6
Cfa015132 Carpinus fangiana HOM05D015741 ORTHO05D020359 4.1e-27 126.3 181 42.0
Cfa010372 Carpinus fangiana HOM05D036278 ORTHO05D028604 1.4e-19 101.3 333 28.2
Hma1.2p1_0805F.1_g221293 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 1.8e-11 74.3 244 29.5
Hma1.2p1_0805F.1_g221299 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 1.8e-11 74.3 244 29.5
Dinv02799 Davidia involucrata HOM05D000665 ORTHO05D000921 1.2e-10 71.6 242 27.7
PSO170G3394 Papaver somniferum HOM05D003171 ORTHO05D000921 2.0e-10 70.9 243 25.9
PSO700G0266 Papaver somniferum HOM05D003171 ORTHO05D000921 2.0e-10 70.9 243 25.9
TWI38G2389 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 2.7e-10 70.5 247 27.1
Dinv17018 Davidia involucrata HOM05D007209 ORTHO05D000921 3.5e-10 70.1 222 28.4
Dinv42966 Davidia involucrata HOM05D007209 ORTHO05D000921 3.5e-10 70.1 222 28.4
Dinv43133 Davidia involucrata HOM05D007209 ORTHO05D000921 3.5e-10 70.1 222 28.4
Dinv39109 Davidia involucrata HOM05D000665 ORTHO05D000921 5.9e-10 69.3 122 34.4
Lj3A995G65 Lonicera japonica HOM05D008338 ORTHO05D000921 7.8e-10 68.9 146 33.6
PSO724G0339 Papaver somniferum HOM05D003171 ORTHO05D000921 1.0e-09 68.6 243 25.9
Lj4A464T6 Lonicera japonica HOM05D008338 ORTHO05D000921 1.7e-09 67.8 146 34.2
Hma1.2p1_0309F.1_g120595 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 3.0e-09 67.0 220 30.0
Dinv44163 Davidia involucrata HOM05D007209 ORTHO05D000921 3.9e-09 66.6 118 33.9
CiPaw.01G106700 Carya illinoinensis HOM05D003171 ORTHO05D000921 5.0e-09 66.2 150 30.7
Dinv07014 Davidia involucrata HOM05D000665 ORTHO05D000921 5.0e-09 66.2 131 34.4
CiPaw.14G058600 Carya illinoinensis HOM05D003171 ORTHO05D000921 6.6e-09 65.9 154 30.5
QL06p033820 Quercus lobata HOM05D003171 ORTHO05D000921 6.6e-09 65.9 302 22.5
Dinv03607 Davidia involucrata HOM05D000665 ORTHO05D000921 8.6e-09 65.5 178 29.8
ECA234G4277 Erigeron canadensis HOM05D000034 ORTHO05D000277 8.6e-09 65.5 134 29.1
PGR119G1784 Punica granatum HOM05D003171 ORTHO05D000037 1.1e-08 65.1 278 24.1
Dinv43770 Davidia involucrata HOM05D000665 ORTHO05D000921 2.5e-08 63.9 186 30.1
QL09p025174 Quercus lobata HOM05D003171 ORTHO05D000921 2.5e-08 63.9 243 22.2
TAR080G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 3.3e-08 63.5 223 29.1
CANSAT64G2197 Cannabis sativa HOM05D003171 ORTHO05D000921 4.3e-08 63.2 93 36.6
Dinv29901 Davidia involucrata HOM05D007209 ORTHO05D000921 4.3e-08 63.2 216 27.3
QL05p040133 Quercus lobata HOM05D003171 ORTHO05D000921 4.3e-08 63.2 243 23.0
QL05p062248 Quercus lobata HOM05D003171 ORTHO05D000921 4.3e-08 63.2 243 22.6
Dinv32776 Davidia involucrata HOM05D007209 ORTHO05D000921 5.6e-08 62.8 177 28.2
Dinv33374 Davidia involucrata HOM05D008473 ORTHO05D000921 9.5e-08 62.0 101 37.6
QL02p070399 Quercus lobata HOM05D003171 ORTHO05D000921 9.5e-08 62.0 243 22.6
QL09p032434 Quercus lobata HOM05D003171 ORTHO05D000921 9.5e-08 62.0 243 22.6
QL10p053818 Quercus lobata HOM05D003171 ORTHO05D000921 1.2e-07 61.6 243 22.2
Rhsim01G0279200 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.2e-07 61.6 138 29.7
CiPaw.15G025900 Carya illinoinensis HOM05D003171 ORTHO05D000921 1.6e-07 61.2 113 34.5
Dinv26864 Davidia involucrata HOM05D000665 ORTHO05D000140 1.6e-07 61.2 235 24.7
Gorai.002G217500 Gossypium raimondii HOM05D000034 ORTHO05D000277 1.6e-07 61.2 147 27.9
MBI04_g27247_MAGBIO Magnolia biondii HOM05D000665 ORTHO05D000285 1.6e-07 61.2 238 26.5
Gorai.006G053700 Gossypium raimondii HOM05D000034 ORTHO05D000277 2.1e-07 60.8 157 27.4
QL02p018541 Quercus lobata HOM05D000665 ORTHO05D000140 2.1e-07 60.8 147 29.9
RcHm_v2.0_Chr1g0354771 Rosa chinensis HOM05D003171 ORTHO05D000921 2.1e-07 60.8 287 22.0
CANSAT25G2398 Cannabis sativa HOM05D000665 ORTHO05D000921 3.6e-07 60.1 302 23.5
CANSAT54G0727 Cannabis sativa HOM05D007209 ORTHO05D000921 3.6e-07 60.1 246 26.4
Gorai.009G418500 Gossypium raimondii HOM05D000034 ORTHO05D000277 3.6e-07 60.1 157 27.4
Prupe.7G061200 Prunus persica HOM05D003171 ORTHO05D000921 3.6e-07 60.1 251 24.3
Rhsim05G0015700 Rhododendron simsii HOM05D000034 ORTHO05D000277 3.6e-07 60.1 138 29.0
CSS0048883 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 4.7e-07 59.7 151 31.8
Dinv20825 Davidia involucrata HOM05D007209 ORTHO05D000921 4.7e-07 59.7 120 31.7
CiPaw.08G101500 Carya illinoinensis HOM05D003171 ORTHO05D000921 6.2e-07 59.3 98 35.7
Eucgr.H04051 Eucalyptus grandis HOM05D000665 ORTHO05D000285 6.2e-07 59.3 132 30.3
Lj7A726T26 Lonicera japonica HOM05D008338 ORTHO05D000921 6.2e-07 59.3 278 24.5
AUR62040593 Chenopodium quinoa HOM05D007209 ORTHO05D000921 8.0e-07 58.9 94 34.0
PSO675G2453 Papaver somniferum HOM05D003171 ORTHO05D000921 8.0e-07 58.9 66 45.5
CiPaw.15G026500 Carya illinoinensis HOM05D003171 ORTHO05D000921 1.4e-06 58.2 113 33.6
LjContig00141g0014815 Lotus japonicus HOM05D007209 ORTHO05D000921 1.4e-06 58.2 96 35.4
PSO384G2875 Papaver somniferum HOM05D000665 ORTHO05D003147 1.4e-06 58.2 141 30.5
Rhsim12G0067000 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.4e-06 58.2 190 31.1
Thecc.09G268100 Theobroma cacao HOM05D000034 ORTHO05D000277 1.4e-06 58.2 163 26.4
Haze_21389 Corylus avellana HOM05D000665 ORTHO05D000140 1.8e-06 57.8 147 27.9
PGR044G1109 Punica granatum HOM05D003171 ORTHO05D000921 1.8e-06 57.8 129 33.3
Rhsim03G0059900 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.8e-06 57.8 189 25.9
ECA246G1509 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.3e-06 57.4 252 24.2
Eucgr.E03604 Eucalyptus grandis HOM05D000665 ORTHO05D000285 2.3e-06 57.4 86 36.0
Glyma.15G177200 Glycine max HOM05D003171 ORTHO05D000921 2.3e-06 57.4 181 29.3
Lj7A99T40 Lonicera japonica HOM05D008338 ORTHO05D000921 2.3e-06 57.4 139 28.1
PGSC0003DMG400043600 Solanum tuberosum HOM05D015401 ORTHO05D020302 2.3e-06 57.4 259 25.5
TWI34G0686 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 2.3e-06 57.4 218 27.5
Dinv31500 Davidia involucrata HOM05D007209 ORTHO05D000921 3.1e-06 57.0 118 32.2
Gohir.A07G187500 Gossypium hirsutum HOM05D000034 ORTHO05D000277 3.1e-06 57.0 135 27.4
QL07p023043 Quercus lobata HOM05D003171 ORTHO05D000921 3.1e-06 57.0 149 28.9
RcHm_v2.0_Chr5g0052631 Rosa chinensis HOM05D001678 ORTHO05D001698 3.1e-06 57.0 141 28.4
Hund29878 Selenicereus undatus HOM05D000876 ORTHO05D000285 3.1e-06 57.0 85 37.6
Hund29879 Selenicereus undatus HOM05D000876 ORTHO05D000285 3.1e-06 57.0 85 37.6
vmacro05171 Vaccinium macrocarpon HOM05D004340 ORTHO05D006363 3.1e-06 57.0 198 27.8
Eucgr.L02923 Eucalyptus grandis HOM05D000665 ORTHO05D000285 4.0e-06 56.6 105 32.4
HanXRQChr10g0300111 Helianthus annuus HOM05D000034 ORTHO05D000277 4.0e-06 56.6 266 25.2
TAR419G0001 Trochodendron aralioides HOM05D019442 ORTHO05D000921 4.0e-06 56.6 218 28.0
CANSAT01G1895 Cannabis sativa HOM05D003171 ORTHO05D000921 5.2e-06 56.2 157 29.9
ECA240G3965 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.2e-06 56.2 139 32.4
PSO716G0001 Papaver somniferum HOM05D000665 ORTHO05D003147 5.2e-06 56.2 142 30.3
QL10p054458 Quercus lobata HOM05D003171 ORTHO05D000921 5.2e-06 56.2 265 23.4
TAR597G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 5.2e-06 56.2 103 34.0
Gorai.013G119800 Gossypium raimondii HOM05D000034 ORTHO05D000277 6.8e-06 55.8 323 22.6
QL10p052249 Quercus lobata HOM05D003171 ORTHO05D000921 6.8e-06 55.8 265 23.4
SGA_v2.0_scaffold13G06723 Striga asiatica HOM05D026701 ORTHO05D019112 6.8e-06 55.8 98 35.7
Aqoxy2G01241 Aquilegia oxysepala HOM05D003171 ORTHO05D000921 8.9e-06 55.5 94 35.1
Eucgr.B02958 Eucalyptus grandis HOM05D000665 ORTHO05D000285 8.9e-06 55.5 132 33.3
FAN10G0526 Fragaria x ananassa HOM05D001678 ORTHO05D001698 8.9e-06 55.5 144 27.1
Lj2g0013227 Lotus japonicus HOM05D007209 ORTHO05D000921 8.9e-06 55.5 96 34.4
Nn2g14028 Nelumbo nucifera HOM05D000665 ORTHO05D000140 8.9e-06 55.5 173 27.2
PSO170G2007 Papaver somniferum HOM05D000665 ORTHO05D003147 8.9e-06 55.5 142 30.3
TWI36G0176 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 8.9e-06 55.5 218 27.5


User provided reference genes

Program Settings