Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 9.9e-83 310.1 157 100.0
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 3.3e-78 295.0 152 97.4
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 1.8e-71 272.7 151 91.4
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 7.1e-65 250.8 155 85.8
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 5.7e-62 241.1 155 78.1
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 1.3e-61 240.0 160 76.2
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 3.7e-61 238.4 159 74.2
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 6.3e-61 237.7 162 77.2
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 1.4e-60 236.5 152 75.7
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 1.4e-60 236.5 160 76.9
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 1.5e-59 233.0 154 75.3
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 2.6e-59 232.3 155 75.5
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 2.9e-58 228.8 153 75.2
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 3.8e-58 228.4 157 70.7
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 1.9e-57 226.1 162 74.1
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 4.2e-57 224.9 153 73.2
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 9.3e-57 223.8 151 75.5
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 9.3e-57 223.8 159 71.1
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 3.6e-56 221.9 157 76.4
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 4.6e-56 221.5 152 73.0
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 2.3e-55 219.2 156 67.3
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 3.9e-55 218.4 167 66.5
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 6.7e-55 217.6 157 72.0
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 8.7e-55 217.2 157 69.4
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 1.1e-54 216.9 155 69.0
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 1.1e-54 216.9 154 66.2
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 4.3e-54 214.9 152 68.4
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 4.3e-54 214.9 155 68.4
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 4.3e-54 214.9 165 66.1
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 7.4e-54 214.2 151 70.2
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 9.7e-54 213.8 157 68.2
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 1.3e-53 213.4 155 65.8
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 1.6e-53 213.0 175 64.6
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 1.6e-53 213.0 149 65.8
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 4.8e-53 211.5 152 67.8
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 8.2e-53 210.7 165 64.8
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 8.2e-53 210.7 157 68.8
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 8.2e-53 210.7 155 65.8
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 1.1e-52 210.3 152 70.4
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 1.1e-52 210.3 151 68.2
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 1.1e-52 210.3 154 64.9
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 1.4e-52 209.9 165 64.8
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 2.4e-52 209.1 151 66.9
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 3.1e-52 208.8 154 66.2
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 4.1e-52 208.4 151 67.5
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 4.1e-52 208.4 184 61.4
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 5.3e-52 208.0 151 70.2
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 5.3e-52 208.0 135 76.3
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 6.9e-52 207.6 159 65.4
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 9.1e-52 207.2 157 66.2
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 1.2e-51 206.8 151 69.5
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 3.4e-51 205.3 177 57.6
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 1.3e-50 203.4 160 65.0
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 5.0e-50 201.4 131 75.6
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 6.5e-50 201.1 137 75.2
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 8.5e-50 200.7 191 59.2
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 1.1e-49 200.3 151 64.9
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 1.1e-49 200.3 148 66.2
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 1.4e-49 199.9 145 69.7
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 5.5e-49 198.0 160 63.1
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 7.2e-49 197.6 133 72.9
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 7.2e-49 197.6 147 65.3
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 2.7e-48 195.7 125 75.2
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 3.6e-48 195.3 125 75.2
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 1.0e-47 193.7 151 62.3
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 1.0e-47 193.7 151 65.6
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 2.3e-47 192.6 157 59.9
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 1.1e-46 190.3 153 60.1
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 2.6e-46 189.1 157 59.2
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 2.6e-46 189.1 157 59.2
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 2.6e-46 189.1 157 59.2
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 3.3e-46 188.7 121 77.7
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 3.3e-46 188.7 136 66.9
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 2.2e-45 186.0 157 60.5
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 2.2e-45 186.0 150 62.7
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 2.8e-45 185.7 156 58.3
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 3.7e-45 185.3 157 60.5
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 6.3e-45 184.5 162 58.6
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 6.3e-45 184.5 150 62.0
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 1.4e-44 183.3 157 60.5
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 1.4e-44 183.3 151 61.6
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 1.8e-44 183.0 174 55.2
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 4.1e-44 181.8 130 70.0
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 2.0e-43 179.5 150 60.7
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 2.0e-43 179.5 149 61.1
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 2.6e-43 179.1 116 75.9
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 1.7e-42 176.4 113 76.1
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 7.2e-41 171.0 157 56.7
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 7.2e-41 171.0 123 66.7
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 3.0e-39 165.6 148 57.4
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 3.0e-39 165.6 148 57.4
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 1.5e-38 163.3 119 64.7
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 2.4e-36 156.0 155 54.8
SHI21090 Sapria himalayana HOM05D006886 ORTHO05D008494 5.3e-36 154.8 111 68.5
Nitab4.5_0001362g0050 Nicotiana tabacum HOM05D006886 ORTHO05D008494 1.2e-35 153.7 114 67.5
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 4.5e-35 151.8 125 60.8
Aa31sc83G60 Aethionema arabicum HOM05D006886 ORTHO05D008494 9.4e-33 144.1 111 62.2
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 4.0e-31 138.7 88 84.1
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 9.7e-30 134.0 81 84.0
RcHm_v2.0_Chr7g0186961 Rosa chinensis HOM05D006886 ORTHO05D008494 1.1e-28 130.6 88 72.7
Os01g0766400 Oryza sativa ssp. japonica HOM05D006886 ORTHO05D008494 1.2e-27 127.1 146 44.5
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 1.7e-26 123.2 145 44.8
Gohir.D07G037233 Gossypium hirsutum HOM05D006886 ORTHO05D008494 4.2e-25 118.6 83 73.5
GSVIVG01036003001 Vitis vinifera HOM05D006886 ORTHO05D008494 9.4e-25 117.5 73 75.3
Pp3c14_9080 Physcomitrium patens HOM05D006886 ORTHO05D008494 2.7e-24 115.9 128 44.5
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 3.6e-24 115.5 147 39.5
AagrBONN_evm.TU.Sc2ySwM_344.4138 Anthoceros agrestis HOM05D006886 ORTHO05D008494 1.8e-23 113.2 122 44.3
MELO3C032323.2 Cucumis melo HOM05D006886 ORTHO05D008494 6.8e-23 111.3 74 71.6
SalBow4G1854 Salvia bowleyana HOM05D006886 ORTHO05D008494 1.4e-20 103.6 83 62.7
Hma1.2p1_0355F.1_g133940 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 2.4e-20 102.8 75 64.0
MD05G1059000 Malus domestica HOM05D006886 ORTHO05D008494 2.4e-20 102.8 70 71.4
Mapoly0034s0101 Marchantia polymorpha HOM05D006886 ORTHO05D008494 2.0e-19 99.8 149 36.2
MELO3C032324.2 Cucumis melo HOM05D006886 ORTHO05D008494 6.5e-18 94.7 98 48.0
Ca_06796_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 2.8e-13 79.3 74 55.4
Ca_13745_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 2.7e-11 72.8 57 63.2
CAN.G285.15 Capsicum annuum HOM05D006886 ORTHO05D008494 3.5e-11 72.4 44 75.0


User provided reference genes

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