Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012985 Carpinus fangiana HOM05D007726 ORTHO05D008819 4.6e-91 337.8 164 100.0
Cfa012989 Carpinus fangiana HOM05D007726 ORTHO05D008819 4.5e-62 241.5 127 91.3
Haze_21347 Corylus avellana HOM05D007726 ORTHO05D008819 2.7e-59 232.3 152 76.3
Haze_21353 Corylus avellana HOM05D007726 ORTHO05D008819 2.7e-59 232.3 152 76.3
CiPaw.07G234400 Carya illinoinensis HOM05D007726 ORTHO05D008819 8.0e-51 204.1 125 73.6
QL02p023649 Quercus lobata HOM05D007726 ORTHO05D008819 6.8e-50 201.1 125 76.8
CiPaw.08G003800 Carya illinoinensis HOM05D007726 ORTHO05D008819 2.4e-47 192.6 127 70.1
CANSAT25G2565 Cannabis sativa HOM05D007726 ORTHO05D008819 1.5e-44 183.3 133 64.7
MD15G1404600 Malus domestica HOM05D007726 ORTHO05D008819 9.5e-44 180.6 136 65.4
Prupe.1G556700 Prunus persica HOM05D007726 ORTHO05D008819 1.0e-42 177.2 126 64.3
RcHm_v2.0_Chr7g0231221 Rosa chinensis HOM05D007726 ORTHO05D008819 6.8e-42 174.5 126 63.5
FvH4_5g31300 Fragaria vesca HOM05D007726 ORTHO05D008819 1.3e-40 170.2 126 61.1
FAN18G2255 Fragaria x ananassa HOM05D007726 ORTHO05D008819 1.3e-40 170.2 126 61.1
RcHm_v2.0_Chr7g0225531 Rosa chinensis HOM05D007726 ORTHO05D008819 2.9e-40 169.1 124 64.5
Manes.18G107700 Manihot esculenta HOM05D007726 ORTHO05D008819 1.8e-39 166.4 126 65.1
Ciclev10020371m.g Citrus clementina HOM05D007726 ORTHO05D008819 5.4e-39 164.9 125 64.8
Cpa.g.sc30.96 Carica papaya HOM05D007726 ORTHO05D008819 1.0e-37 160.6 126 61.1
Dinv41784 Davidia involucrata HOM05D007726 ORTHO05D008819 2.3e-37 159.5 126 61.9
Dinv24637 Davidia involucrata HOM05D007726 ORTHO05D008819 1.1e-36 157.1 126 60.3
Sabra13G0090000 Salix brachista HOM05D007726 ORTHO05D008819 7.3e-36 154.5 126 58.7
Potri.013G104100 Populus trichocarpa HOM05D007726 ORTHO05D008819 9.5e-36 154.1 126 58.7
Ciclev10020327m.g Citrus clementina HOM05D007726 ORTHO05D008819 1.6e-35 153.3 127 66.9
Atru.chr13.2339 Acer truncatum HOM05D007726 ORTHO05D008819 2.1e-35 152.9 126 58.7
Eucgr.F02895 Eucalyptus grandis HOM05D007726 ORTHO05D008819 1.8e-34 149.8 126 56.3
FAN08G0648 Fragaria x ananassa HOM05D007726 ORTHO05D008819 2.3e-34 149.4 133 57.9
FvH4_5g30670 Fragaria vesca HOM05D007726 ORTHO05D008819 3.1e-34 149.1 133 57.1
FAN18G4305 Fragaria x ananassa HOM05D007726 ORTHO05D008819 8.9e-34 147.5 133 55.6
Actinidia34726 Actinidia chinensis HOM05D007726 ORTHO05D008819 1.5e-33 146.7 125 55.2
FAN13G1334 Fragaria x ananassa HOM05D007726 ORTHO05D008819 2.6e-33 146.0 133 55.6
TWI14G0263 Tripterygium wilfordii HOM05D007726 ORTHO05D008819 2.2e-32 142.9 125 59.2
ClCG09G010150 Citrullus lanatus HOM05D007726 ORTHO05D008819 8.3e-32 141.0 125 56.8
Oeu000542.1 Olea europaea HOM05D007726 ORTHO05D008819 2.4e-31 139.4 127 55.1
MELO3C024088.2 Cucumis melo HOM05D007726 ORTHO05D008819 5.4e-31 138.3 125 55.2
CsaV3_7G024580 Cucumis sativus L. HOM05D007726 ORTHO05D008819 5.4e-31 138.3 125 55.2
Sed0014390 Sechium edule HOM05D007726 ORTHO05D008819 9.2e-31 137.5 124 53.2
Hund16767 Selenicereus undatus HOM05D007726 ORTHO05D008819 7.8e-30 134.4 128 53.9
Cc10_g11210 Coffea canephora HOM05D007726 ORTHO05D008819 1.7e-29 133.3 126 53.2
Lj7A388T90 Lonicera japonica HOM05D007726 ORTHO05D008819 1.7e-29 133.3 108 59.3
RcHm_v2.0_Chr7g0226391 Rosa chinensis HOM05D007726 ORTHO05D008819 6.6e-29 131.3 124 57.3
CSS0041692 Camellia sinensis var. sinensis HOM05D007726 ORTHO05D008819 1.9e-28 129.8 126 50.0
CSS0044196 Camellia sinensis var. sinensis HOM05D007726 ORTHO05D008819 1.9e-28 129.8 126 50.0
TAR381G1565 Trochodendron aralioides HOM05D007726 ORTHO05D008819 1.9e-28 129.8 126 51.6
Lsat_1_v5_gn_4_28421 Lactuca sativa HOM05D007726 ORTHO05D008819 3.3e-28 129.0 123 49.6
HanXRQChr17g0565271 Helianthus annuus HOM05D007726 ORTHO05D008819 5.2e-26 121.7 124 46.8
CSS0013132 Camellia sinensis var. sinensis HOM05D007726 ORTHO05D008819 1.2e-25 120.6 127 51.2
Lj7C388T5 Lonicera japonica HOM05D007726 ORTHO05D008819 1.2e-25 120.6 126 48.4
MSTRG.25451 Avicennia marina HOM05D007726 ORTHO05D008819 1.5e-25 120.2 126 47.6
ECA234G1595 Erigeron canadensis HOM05D007726 ORTHO05D008819 7.5e-25 117.9 124 46.8
Manes.18G107800 Manihot esculenta HOM05D007726 ORTHO05D008819 7.1e-23 111.3 128 46.9
Hund16766 Selenicereus undatus HOM05D007726 ORTHO05D008819 1.6e-22 110.2 132 43.9
Rhsim02G0204800 Rhododendron simsii HOM05D007726 ORTHO05D008819 2.7e-22 109.4 126 44.4
AUR62004583 Chenopodium quinoa HOM05D007726 ORTHO05D008819 5.1e-21 105.1 142 40.8
PSO339G1195 Papaver somniferum HOM05D007726 ORTHO05D008819 8.6e-21 104.4 135 40.0
EL10Ac1g00153 Beta vulgaris HOM05D007726 ORTHO05D008819 1.1e-20 104.0 141 41.1
AUR62023529 Chenopodium quinoa HOM05D007726 ORTHO05D008819 1.9e-20 103.2 141 40.4
Actinidia22323 Actinidia chinensis HOM05D007726 ORTHO05D008819 1.2e-19 100.5 131 42.7
Cc10_g11190 Coffea canephora HOM05D007726 ORTHO05D008819 3.6e-19 99.0 105 49.5
Sc23g0001620 Simmondsia chinensis HOM05D007726 ORTHO05D008819 1.2e-17 94.0 130 37.7
PSO384G2295 Papaver somniferum HOM05D007726 ORTHO05D008819 1.3e-16 90.5 123 39.8
Nitab4.5_0002389g0090 Nicotiana tabacum HOM05D007726 ORTHO05D008819 1.4e-15 87.0 132 34.8
Solyc09g072680.2 Solanum lycopersicum HOM05D007726 ORTHO05D008819 2.4e-15 86.3 118 38.1
Sopen09g028490 Solanum pennellii HOM05D007726 ORTHO05D008819 2.4e-15 86.3 118 38.1
PGSC0003DMG400024288 Solanum tuberosum HOM05D007726 ORTHO05D008819 1.2e-14 84.0 118 36.4
Nitab4.5_0003295g0110 Nicotiana tabacum HOM05D007726 ORTHO05D008819 1.6e-14 83.6 133 33.1
CAN.G1270.6 Capsicum annuum HOM05D007726 ORTHO05D008819 2.1e-14 83.2 107 41.1
Actinidia13258 Actinidia chinensis HOM05D007726 ORTHO05D008819 3.5e-14 82.4 85 48.2
AUR62023531 Chenopodium quinoa HOM05D007726 ORTHO05D008819 5.1e-13 78.6 89 43.8
Lsat_1_v5_gn_8_140181 Lactuca sativa HOM05D007726 ORTHO05D008819 1.9e-12 76.6 107 36.4
AUR62004584 Chenopodium quinoa HOM05D007726 ORTHO05D008819 5.6e-12 75.1 89 42.7
Actinidia13257 Actinidia chinensis HOM05D007726 ORTHO05D008819 3.6e-11 72.4 99 43.4
Peaxi162Scf00501g00127 Petunia axillaris HOM05D000278 ORTHO05D004371 1.8e-10 70.1 128 33.6
Sopen09g006900 Solanum pennellii HOM05D008437 ORTHO05D010577 1.8e-10 70.1 149 32.2
Migut.C01271 Erythranthe guttata HOM05D007726 ORTHO05D008819 4.0e-10 68.9 124 34.7
Peaxi162Scf00141g00138 Petunia axillaris HOM05D008437 ORTHO05D010577 4.0e-10 68.9 86 40.7
Nitab4.5_0004827g0010 Nicotiana tabacum HOM05D008437 ORTHO05D010577 2.0e-09 66.6 172 27.3
HanXRQChr17g0558011 Helianthus annuus HOM05D007726 ORTHO05D008819 2.6e-09 66.2 113 34.5
Aqoxy3G01652 Aquilegia oxysepala HOM05D006664 ORTHO05D008819 3.4e-09 65.9 106 32.1
Nitab4.5_0000008g0620 Nicotiana tabacum HOM05D008437 ORTHO05D010577 3.4e-09 65.9 101 37.6
Sopen09g006880 Solanum pennellii HOM05D008437 ORTHO05D010577 9.9e-09 64.3 83 43.4
Migut.C01272 Erythranthe guttata HOM05D007726 ORTHO05D008819 1.3e-08 63.9 112 31.2
Peaxi162Scf00141g00118 Petunia axillaris HOM05D008437 ORTHO05D010577 1.3e-08 63.9 86 39.5
SGA_v2.0_scaffold118G32546 Striga asiatica HOM05D007726 ORTHO05D008819 1.3e-08 63.9 94 37.2
Sopen05g009680 Solanum pennellii HOM05D008437 ORTHO05D010577 1.7e-08 63.5 83 43.4
QL08p029414 Quercus lobata HOM05D000007 ORTHO05D000521 2.2e-08 63.2 87 36.8
Sp3g06790 Schrenkiella parvula HOM05D000007 ORTHO05D000521 8.4e-08 61.2 86 41.9
COL.COLO4_20026 Corchorus olitorius HOM05D000007 ORTHO05D000521 1.9e-07 60.1 86 39.5
CARHR082600 Cardamine hirsuta HOM05D000007 ORTHO05D000521 3.2e-07 59.3 87 39.1
Thhalv10020831m.g Eutrema salsugineum HOM05D000007 ORTHO05D000521 3.2e-07 59.3 87 39.1
THA.LOC104819049 Tarenaya hassleriana HOM05D000007 ORTHO05D000521 3.2e-07 59.3 87 37.9
AT3G07870 Arabidopsis thaliana HOM05D000007 ORTHO05D000521 4.2e-07 58.9 87 39.1
A03p35500 Brassica napus HOM05D000007 ORTHO05D000521 4.2e-07 58.9 87 39.1
C03p43160 Brassica napus HOM05D000007 ORTHO05D000521 4.2e-07 58.9 87 39.1
BolC3t16585H Brassica oleracea HOM05D000007 ORTHO05D000521 4.2e-07 58.9 87 39.1
BraA03t12727Z Brassica rapa HOM05D000007 ORTHO05D000521 4.2e-07 58.9 87 39.1
Gohir.A09G060800 Gossypium hirsutum HOM05D000007 ORTHO05D000521 7.1e-07 58.2 87 39.1
Nn8g40182 Nelumbo nucifera HOM05D008437 ORTHO05D008819 7.1e-07 58.2 82 35.4
Aa31LG5G18430 Aethionema arabicum HOM05D001152 ORTHO05D000967 9.3e-07 57.8 86 36.0
Atru.chr6.3336 Acer truncatum HOM05D000007 ORTHO05D000039 1.2e-06 57.4 148 29.7
AL3G19240 Arabidopsis lyrata HOM05D000007 ORTHO05D000521 1.2e-06 57.4 87 37.9
Carub.0003s0745 Capsella rubella HOM05D000007 ORTHO05D000521 1.2e-06 57.4 87 39.1
COL.COLO4_25849 Corchorus olitorius HOM05D000007 ORTHO05D000521 1.2e-06 57.4 84 39.3
BcaC09g47958 Brassica carinata HOM05D000007 ORTHO05D000521 1.6e-06 57.0 87 37.9
Gohir.D09G059800 Gossypium hirsutum HOM05D000007 ORTHO05D000521 2.1e-06 56.6 87 37.9
Gorai.006G074400 Gossypium raimondii HOM05D000007 ORTHO05D000521 2.1e-06 56.6 87 37.9
Psat2g140960 Pisum sativum HOM05D000007 ORTHO05D000521 2.7e-06 56.2 79 36.7
CANSAT78G1762 Cannabis sativa HOM05D000007 ORTHO05D000521 4.6e-06 55.5 109 33.0
PGR142G2144 Punica granatum HOM05D000007 ORTHO05D000521 7.8e-06 54.7 81 33.3
RhsimUnG0110600 Rhododendron simsii HOM05D000007 ORTHO05D000017 7.8e-06 54.7 106 29.2


User provided reference genes

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