Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 5.9e-59 230.7 121 100.0
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 3.6e-56 221.5 121 96.7
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 5.5e-41 171.0 125 68.0
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 1.2e-40 169.9 121 77.7
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 1.5e-30 136.3 122 59.8
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 3.4e-30 135.2 122 58.2
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 6.4e-29 131.0 124 62.9
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 1.2e-27 126.7 85 71.8
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 1.6e-27 126.3 123 55.3
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 2.0e-27 125.9 85 71.8
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 2.7e-27 125.6 126 54.0
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 5.9e-27 124.4 117 53.8
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 3.0e-26 122.1 121 52.1
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 3.0e-26 122.1 102 56.9
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 3.0e-26 122.1 121 52.1
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 5.0e-26 121.3 126 50.8
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 8.6e-26 120.6 122 53.3
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 1.1e-25 120.2 76 72.4
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 1.1e-25 120.2 110 57.3
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 1.5e-25 119.8 121 51.2
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 1.5e-25 119.8 76 72.4
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 1.5e-25 119.8 129 49.6
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 1.5e-25 119.8 122 52.5
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 1.9e-25 119.4 122 54.9
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 2.5e-25 119.0 81 65.4
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 3.3e-25 118.6 104 55.8
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 3.3e-25 118.6 84 69.0
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 3.3e-25 118.6 121 50.4
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 4.3e-25 118.2 76 71.1
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 4.3e-25 118.2 117 55.6
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 4.3e-25 118.2 121 51.2
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 5.6e-25 117.9 121 51.2
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 5.6e-25 117.9 129 48.8
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 5.6e-25 117.9 121 57.9
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 9.5e-25 117.1 122 60.7
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 1.6e-24 116.3 89 64.0
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 1.6e-24 116.3 121 55.4
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 1.6e-24 116.3 121 50.4
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 2.1e-24 115.9 87 62.1
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 2.1e-24 115.9 121 59.5
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 4.7e-24 114.8 81 67.9
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 1.4e-23 113.2 103 55.3
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 1.4e-23 113.2 123 63.4
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 1.8e-23 112.8 79 64.6
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 3.1e-23 112.1 105 57.1
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 3.1e-23 112.1 105 57.1
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 3.1e-23 112.1 105 57.1
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 3.1e-23 112.1 84 60.7
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 8.9e-23 110.5 76 65.8
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 1.2e-22 110.2 88 62.5
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 2.0e-22 109.4 90 53.3
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 2.0e-22 109.4 87 70.1
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 9.8e-22 107.1 118 61.9
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 2.2e-21 105.9 119 49.6
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 6.4e-21 104.4 84 57.1
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 8.3e-21 104.0 121 61.2
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 1.4e-20 103.2 121 60.3
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 4.1e-20 101.7 65 70.8
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 4.1e-20 101.7 65 70.8
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 1.2e-19 100.1 68 66.2
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 3.5e-19 98.6 65 67.7
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 3.5e-19 98.6 65 67.7
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 6.0e-19 97.8 87 56.3
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 1.0e-18 97.1 86 55.8
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 1.3e-18 96.7 63 85.7
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 3.0e-18 95.5 104 61.5
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 3.9e-18 95.1 94 53.2
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 6.6e-18 94.4 62 80.6
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 8.6e-18 94.0 79 59.5
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 1.9e-17 92.8 100 50.0
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 5.6e-17 91.3 126 46.8
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 7.3e-17 90.9 83 66.3
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 1.2e-16 90.1 80 71.2
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 1.6e-16 89.7 55 76.4
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 3.6e-16 88.6 55 76.4
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 5.2e-15 84.7 75 73.3
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 1.3e-13 80.1 52 67.3
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 2.1e-11 72.8 82 50.0
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 1.0e-10 70.5 37 78.4
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 1.9e-09 66.2 45 68.9
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 8.1e-08 60.8 46 63.0


User provided reference genes

Program Settings