Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012825 Carpinus fangiana HOM05D005006 ORTHO05D005903 1.1e-76 290.0 156 100.0
Haze_08652 Corylus avellana HOM05D005006 ORTHO05D005903 3.3e-70 268.5 157 90.4
Haze_08651 Corylus avellana HOM05D005006 ORTHO05D005903 7.3e-70 267.3 157 89.8
QL02p031286 Quercus lobata HOM05D005006 ORTHO05D005903 6.2e-53 211.1 157 70.1
CiPaw.11G123200 Carya illinoinensis HOM05D005006 ORTHO05D005903 8.1e-53 210.7 160 73.1
RcHm_v2.0_Chr7g0195351 Rosa chinensis HOM05D005006 ORTHO05D005903 6.9e-44 181.0 166 63.3
FAN13G1208 Fragaria x ananassa HOM05D005006 ORTHO05D005903 9.0e-44 180.6 148 67.6
FAN18G0263 Fragaria x ananassa HOM05D005006 ORTHO05D005903 9.0e-44 180.6 148 67.6
FAN18G2980 Fragaria x ananassa HOM05D005006 ORTHO05D005903 1.2e-43 180.3 148 67.6
FvH4_5g04150 Fragaria vesca HOM05D005006 ORTHO05D005903 2.6e-43 179.1 148 68.2
TAR629G3139 Trochodendron aralioides HOM05D005006 ORTHO05D005903 1.3e-42 176.8 158 60.8
Dinv37546 Davidia involucrata HOM05D005006 ORTHO05D005903 1.2e-40 170.2 162 61.1
Potri.001G093500 Populus trichocarpa HOM05D005006 ORTHO05D005903 7.9e-40 167.5 138 65.9
Solyc08g082090.1 Solanum lycopersicum HOM05D005006 ORTHO05D005903 5.1e-39 164.9 149 61.7
Sopen08g030380 Solanum pennellii HOM05D005006 ORTHO05D005903 5.1e-39 164.9 149 61.7
Ciclev10022492m.g Citrus clementina HOM05D005006 ORTHO05D005903 1.5e-38 163.3 159 59.7
Atru.chr9.2028 Acer truncatum HOM05D005006 ORTHO05D005903 1.9e-38 162.9 156 59.6
Atru.chr9.2036 Acer truncatum HOM05D005006 ORTHO05D005903 1.9e-38 162.9 156 59.6
Eucgr.D01714 Eucalyptus grandis HOM05D005006 ORTHO05D005903 5.7e-38 161.4 164 57.3
PGR031G0908 Punica granatum HOM05D005006 ORTHO05D005903 5.7e-38 161.4 162 57.4
CANSAT21G0143 Cannabis sativa HOM05D005006 ORTHO05D005903 7.4e-38 161.0 179 58.1
PGSC0003DMG400012296 Solanum tuberosum HOM05D005006 ORTHO05D005903 7.4e-38 161.0 149 59.7
Manes.02G011900 Manihot esculenta HOM05D005006 ORTHO05D005903 6.3e-37 157.9 143 61.5
MD06G1103200 Malus domestica HOM05D005006 ORTHO05D005903 1.1e-36 157.1 175 61.1
ClCG07G014930 Citrullus lanatus HOM05D005006 ORTHO05D005903 3.1e-36 155.6 169 53.3
ClCG10G009270 Citrullus lanatus HOM05D005006 ORTHO05D005903 3.1e-36 155.6 169 53.3
Atru.chr2.764 Acer truncatum HOM05D005006 ORTHO05D005903 1.2e-35 153.7 156 59.0
Sed0010968 Sechium edule HOM05D005006 ORTHO05D005903 1.2e-35 153.7 147 58.5
Thecc.03G294000 Theobroma cacao HOM05D005006 ORTHO05D005903 1.2e-35 153.7 151 61.6
Duzib084G0720 Durio zibethinus HOM05D005006 ORTHO05D005903 1.5e-35 153.3 153 58.8
Hma1.2p1_0359F.1_g135340 Hydrangea macrophylla HOM05D005006 ORTHO05D005903 3.4e-35 152.1 173 57.8
MD14G1122100 Malus domestica HOM05D005006 ORTHO05D005903 3.4e-35 152.1 175 58.9
ClCG01G001990 Citrullus lanatus HOM05D005006 ORTHO05D005903 1.0e-34 150.6 154 57.8
COL.COLO4_21708 Corchorus olitorius HOM05D005006 ORTHO05D005903 1.0e-34 150.6 165 55.8
Sabra01G0069400 Salix brachista HOM05D000089 ORTHO05D003403 1.0e-34 150.6 136 64.0
MELO3C005742.2 Cucumis melo HOM05D005006 ORTHO05D005903 2.2e-34 149.4 148 63.5
Prupe.5G116000 Prunus persica HOM05D005006 ORTHO05D005903 2.2e-34 149.4 165 57.0
MELO3C016304.2 Cucumis melo HOM05D005006 ORTHO05D005903 2.9e-34 149.1 147 55.8
FAN04G1712 Fragaria x ananassa HOM05D005006 ORTHO05D005903 3.8e-34 148.7 141 58.9
FAN04G3134 Fragaria x ananassa HOM05D005006 ORTHO05D005903 3.8e-34 148.7 141 58.9
Actinidia01391 Actinidia chinensis HOM05D005006 ORTHO05D005903 6.5e-34 147.9 159 52.2
Gohir.A08G085100 Gossypium hirsutum HOM05D005006 ORTHO05D005903 6.5e-34 147.9 147 57.1
Manes.01G045300 Manihot esculenta HOM05D005006 ORTHO05D005903 6.5e-34 147.9 174 51.7
Oeu061095.1 Olea europaea HOM05D005006 ORTHO05D005903 1.1e-33 147.1 155 54.8
Duzib068G0822 Durio zibethinus HOM05D005006 ORTHO05D005903 5.5e-33 144.8 152 56.6
Glyma.01G224600 Glycine max HOM05D005006 ORTHO05D005903 9.4e-33 144.1 155 57.4
Cc08_g15850 Coffea canephora HOM05D005006 ORTHO05D005903 1.2e-32 143.7 155 55.5
Glyma.11G018400 Glycine max HOM05D005006 ORTHO05D005903 1.6e-32 143.3 156 56.4
Sed0017945 Sechium edule HOM05D005006 ORTHO05D005903 4.6e-32 141.7 158 51.3
CsaV3_5G002120 Cucumis sativus L. HOM05D005006 ORTHO05D005903 6.1e-32 141.4 151 61.6
Gohir.D08G132000 Gossypium hirsutum HOM05D005006 ORTHO05D005903 6.1e-32 141.4 164 52.4
Gorai.004G134900 Gossypium raimondii HOM05D005006 ORTHO05D005903 6.1e-32 141.4 164 52.4
Nitab4.5_0007099g0020 Nicotiana tabacum HOM05D005006 ORTHO05D005903 6.1e-32 141.4 147 55.1
Aqoxy5G04131 Aquilegia oxysepala HOM05D005006 ORTHO05D005903 2.3e-31 139.4 162 57.4
CsaV3_4G006460 Cucumis sativus L. HOM05D005006 ORTHO05D005903 3.9e-31 138.7 159 49.7
TWI15G0537 Tripterygium wilfordii HOM05D005006 ORTHO05D005903 1.1e-30 137.1 142 56.3
TWI81G0332 Tripterygium wilfordii HOM05D005006 ORTHO05D005903 2.5e-30 136.0 165 53.3
Lsat_1_v5_gn_6_11781 Lactuca sativa HOM05D005006 ORTHO05D005903 7.4e-30 134.4 167 49.7
Lj4g0012980 Lotus japonicus HOM05D005006 ORTHO05D005903 3.7e-29 132.1 172 54.1
Psat0s4474g0040 Pisum sativum HOM05D005006 ORTHO05D005903 1.4e-28 130.2 167 50.9
Rhsim07G0083400 Rhododendron simsii HOM05D005006 ORTHO05D005903 1.4e-28 130.2 145 51.7
Sc22g0005120 Simmondsia chinensis HOM05D005006 ORTHO05D005903 2.4e-28 129.4 141 51.1
HanXRQChr07g0191041 Helianthus annuus HOM05D005006 ORTHO05D005903 5.3e-28 128.3 150 50.7
LjContig00312_ERROPOS870357g0014674 Lotus japonicus HOM05D005006 ORTHO05D005903 9.1e-28 127.5 154 53.9
AL7G47430 Arabidopsis lyrata HOM05D005006 ORTHO05D005903 1.5e-27 126.7 180 50.6
AT5G41810 Arabidopsis thaliana HOM05D005006 ORTHO05D005903 2.0e-27 126.3 180 50.6
VMungo0251G1458 Vigna mungo HOM05D005006 ORTHO05D005903 2.0e-27 126.3 188 46.3
Cpa.g.sc775.1 Carica papaya HOM05D005006 ORTHO05D005903 2.6e-27 125.9 154 52.6
Lsat_1_v5_gn_6_85661 Lactuca sativa HOM05D005006 ORTHO05D005903 2.6e-27 125.9 150 50.7
CARHR212760 Cardamine hirsuta HOM05D005006 ORTHO05D005903 3.4e-27 125.6 177 50.8
C06p20240 Brassica napus HOM05D005006 ORTHO05D005903 5.9e-27 124.8 188 44.1
BolC6t37205H Brassica oleracea HOM05D005006 ORTHO05D005903 5.9e-27 124.8 188 44.1
MBI07_g24340_MAGBIO Magnolia biondii HOM05D005006 ORTHO05D005903 5.9e-27 124.8 148 52.7
BcaC08g44558 Brassica carinata HOM05D005006 ORTHO05D005903 1.3e-26 123.6 180 46.7
Sp7g00270 Schrenkiella parvula HOM05D005006 ORTHO05D005903 1.3e-26 123.6 171 48.0
BcaB02g07876 Brassica carinata HOM05D005006 ORTHO05D005903 1.7e-26 123.2 182 47.3
TPR.G6668 Trifolium pratense HOM05D005006 ORTHO05D005903 1.7e-26 123.2 170 52.9
Glyma.05G215700 Glycine max HOM05D005006 ORTHO05D005903 2.2e-26 122.9 178 48.9
SGA_v2.0_scaffold111G31421 Striga asiatica HOM05D005006 ORTHO05D005903 2.9e-26 122.5 145 51.0
A07p20950 Brassica napus HOM05D005006 ORTHO05D005903 3.8e-26 122.1 181 45.9
THA.LOC104809339 Tarenaya hassleriana HOM05D005006 ORTHO05D005903 3.8e-26 122.1 190 46.8
HanXRQChr03g0085171 Helianthus annuus HOM05D005006 ORTHO05D005903 5.0e-26 121.7 156 51.9
Phvul.002G296900 Phaseolus vulgaris HOM05D005006 ORTHO05D005903 5.0e-26 121.7 181 45.9
Sed0013874 Sechium edule HOM05D005006 ORTHO05D005903 8.5e-26 120.9 141 51.8
BraA07t29781Z Brassica rapa HOM05D005006 ORTHO05D005903 1.9e-25 119.8 182 45.1
CSS0014692 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 1.9e-25 119.8 168 48.2
CSS0022093 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 1.9e-25 119.8 158 51.3
Peaxi162Scf00074g01119 Petunia axillaris HOM05D005006 ORTHO05D005903 1.9e-25 119.8 143 49.7
AUR62010816 Chenopodium quinoa HOM05D005006 ORTHO05D005903 2.5e-25 119.4 165 50.9
ECA240G3705 Erigeron canadensis HOM05D005006 ORTHO05D005903 2.5e-25 119.4 151 53.6
Medtr5g009490 Medicago truncatula HOM05D005006 ORTHO05D005903 2.5e-25 119.4 184 43.5
Nn1g01823 Nelumbo nucifera HOM05D005006 ORTHO05D005903 3.2e-25 119.0 148 48.0
DCAR_027715 Daucus carota HOM05D005006 ORTHO05D005903 5.5e-25 118.2 161 49.1
Lalb_Chr05g0224201 Lupinus albus HOM05D005006 ORTHO05D005903 5.5e-25 118.2 170 45.9
Glyma.08G021800 Glycine max HOM05D005006 ORTHO05D005903 2.1e-24 116.3 169 47.9
ClCG11G005390 Citrullus lanatus HOM05D000189 ORTHO05D006628 2.7e-24 115.9 139 51.8
MSTRG.13880 Avicennia marina HOM05D005006 ORTHO05D005903 4.7e-24 115.2 163 46.0
Carub.0007s3356 Capsella rubella HOM05D005006 ORTHO05D005903 4.7e-24 115.2 186 47.3
Medtr8g099340 Medicago truncatula HOM05D005006 ORTHO05D005903 6.1e-24 114.8 171 44.4
Rhsim02G0241500 Rhododendron simsii HOM05D005006 ORTHO05D005903 1.4e-23 113.6 166 47.6
BcaC04g22629 Brassica carinata HOM05D005006 ORTHO05D005903 5.1e-23 111.7 143 51.0
A09p14260 Brassica napus HOM05D005006 ORTHO05D005903 5.1e-23 111.7 157 46.5
Psat7g027080 Pisum sativum HOM05D005006 ORTHO05D005903 8.8e-23 110.9 167 45.5
VMungo1215G3249 Vigna mungo HOM05D005266 ORTHO05D006416 8.8e-23 110.9 143 49.7
C09p17190 Brassica napus HOM05D005006 ORTHO05D005903 1.5e-22 110.2 142 50.0
BolC9t54617H Brassica oleracea HOM05D005006 ORTHO05D005903 1.5e-22 110.2 142 50.0
BraA09t37075Z Brassica rapa HOM05D005006 ORTHO05D005903 1.5e-22 110.2 154 46.1
MBI06_g32753_MAGBIO Magnolia biondii HOM05D005006 ORTHO05D005903 2.0e-22 109.8 157 47.1
Carub.0002s0046 Capsella rubella HOM05D005006 ORTHO05D005903 2.6e-22 109.4 151 47.0
ECA233G6185 Erigeron canadensis HOM05D005006 ORTHO05D005903 5.7e-22 108.2 167 43.7
Sp2g00420 Schrenkiella parvula HOM05D005006 ORTHO05D005903 7.4e-22 107.8 143 46.9
AL2G10550 Arabidopsis lyrata HOM05D005006 ORTHO05D005903 1.7e-21 106.7 150 45.3
Ca_17490_v3 Cicer arietinum L. HOM05D005006 ORTHO05D005903 2.2e-21 106.3 176 42.6
Thhalv10023644m.g Eutrema salsugineum HOM05D005006 ORTHO05D005903 4.8e-21 105.1 157 43.3
Aa31LG9G320 Aethionema arabicum HOM05D005006 ORTHO05D005903 2.4e-20 102.8 158 44.9
AT1G64340 Arabidopsis thaliana HOM05D005006 ORTHO05D005903 3.1e-20 102.4 143 50.3
BcaB07g31512 Brassica carinata HOM05D005006 ORTHO05D005903 4.1e-20 102.1 150 47.3
ClCG01G011510 Citrullus lanatus HOM05D005006 ORTHO05D005903 5.3e-20 101.7 87 60.9
ClCG05G010200 Citrullus lanatus HOM05D005006 ORTHO05D005903 5.3e-20 101.7 87 60.9
ClCG07G009600 Citrullus lanatus HOM05D005006 ORTHO05D005903 5.3e-20 101.7 87 60.9
PGR042G1559 Punica granatum HOM05D005006 ORTHO05D005903 5.3e-20 101.7 141 46.1
Peaxi162Scf00117g00128 Petunia axillaris HOM05D005006 ORTHO05D005903 4.5e-19 98.6 133 42.9
Manes.02G012001 Manihot esculenta HOM05D005006 ORTHO05D005903 1.1e-17 94.0 139 47.5
Sc01g0010170 Simmondsia chinensis HOM05D005006 ORTHO05D005903 3.2e-17 92.4 154 45.5
Dinv38852 Davidia involucrata HOM05D005006 ORTHO05D005903 5.5e-17 91.7 90 61.1
Gohir.A12G235100 Gossypium hirsutum HOM05D005006 ORTHO05D005903 2.1e-16 89.7 117 51.3
Gohir.D12G236200 Gossypium hirsutum HOM05D005006 ORTHO05D005903 8.0e-16 87.8 89 57.3
Gorai.008G253000 Gossypium raimondii HOM05D005006 ORTHO05D005903 8.0e-16 87.8 89 57.3
TAR636G0983 Trochodendron aralioides HOM05D000337 ORTHO05D000297 3.0e-15 85.9 63 65.1
ATR0589G111 Amborella trichopoda HOM05D005006 ORTHO05D005903 3.9e-15 85.5 165 39.4
Gohir.A11G024100 Gossypium hirsutum HOM05D005006 ORTHO05D005903 5.7e-14 81.6 89 52.8
Gohir.A02G102000 Gossypium hirsutum HOM05D005006 ORTHO05D005903 9.7e-14 80.9 117 48.7
SalBow1G2562 Salvia bowleyana HOM05D005006 ORTHO05D005903 1.7e-13 80.1 108 50.9
SalBow1G1740 Salvia bowleyana HOM05D005006 ORTHO05D005903 2.2e-13 79.7 108 50.9
Gohir.D03G082400 Gossypium hirsutum HOM05D005006 ORTHO05D005903 3.7e-13 79.0 91 54.9
Gorai.003G081300 Gossypium raimondii HOM05D005006 ORTHO05D005903 3.7e-13 79.0 91 54.9
Nn3g19068 Nelumbo nucifera HOM05D005006 ORTHO05D005903 4.8e-13 78.6 87 51.7
Phvul.002G163200 Phaseolus vulgaris HOM05D005006 ORTHO05D005903 1.6e-11 73.6 84 52.4
TPR.G3451 Trifolium pratense HOM05D006501 ORTHO05D008241 7.7e-11 71.2 79 51.9
PSO729G0067 Papaver somniferum HOM05D005006 ORTHO05D005903 1.0e-10 70.9 118 46.6
PSO724G0350 Papaver somniferum HOM05D005006 ORTHO05D005903 5.0e-10 68.6 118 39.0
PSO724G0798 Papaver somniferum HOM05D005006 ORTHO05D005903 6.5e-10 68.2 165 33.9
PSO724G1125 Papaver somniferum HOM05D005006 ORTHO05D005903 1.5e-09 67.0 165 33.3
Rhsim02G0241700 Rhododendron simsii HOM05D000089 ORTHO05D003403 1.9e-09 66.6 151 35.8
CSS0044305 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 5.5e-09 65.1 54 63.0
SGA_v2.0_scaffold173G39083 Striga asiatica HOM05D005006 ORTHO05D005903 2.7e-08 62.8 39 71.8
Zm00001eb382950 Zea mays HOM05D005006 ORTHO05D005903 6.1e-08 61.6 148 39.2
Os06g0525200 Oryza sativa ssp. japonica HOM05D005006 ORTHO05D005903 4.0e-07 58.9 40 67.5
AUR62019816 Chenopodium quinoa HOM05D005006 ORTHO05D005903 2.0e-06 56.6 62 46.8
CSS0044713 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 4.4e-06 55.5 129 34.9


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