Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012808 Carpinus fangiana HOM05D005835 ORTHO05D007187 6.3e-89 330.9 181 100.0
Haze_08597 Corylus avellana HOM05D005835 ORTHO05D007187 8.5e-86 320.5 180 90.6
QL03p017823 Quercus lobata HOM05D005835 ORTHO05D007187 1.4e-67 260.0 179 84.4
CiPaw.12G105500 Carya illinoinensis HOM05D005835 ORTHO05D007187 3.0e-67 258.8 180 76.7
QL93p2009_0035 Quercus lobata HOM05D005835 ORTHO05D007187 8.8e-67 257.3 179 83.8
CiPaw.11G149200 Carya illinoinensis HOM05D005835 ORTHO05D007187 5.7e-66 254.6 181 74.0
Prupe.4G260700 Prunus persica HOM05D005835 ORTHO05D007187 3.2e-61 238.8 180 67.8
QL12p014300 Quercus lobata HOM05D005835 ORTHO05D007187 9.4e-61 237.3 173 79.8
Cpa.g.sc29.103 Carica papaya HOM05D005835 ORTHO05D007187 5.7e-58 228.0 180 64.4
Manes.01G074300 Manihot esculenta HOM05D005835 ORTHO05D007187 7.5e-58 227.6 179 65.9
Ciclev10022502m.g Citrus clementina HOM05D005835 ORTHO05D007187 1.7e-57 226.5 180 72.8
Hma1.2p1_2131F.1_g314730 Hydrangea macrophylla HOM05D005835 ORTHO05D007187 2.2e-57 226.1 180 66.1
Duzib068G0435 Durio zibethinus HOM05D005835 ORTHO05D007187 2.8e-57 225.7 180 65.6
Dinv21579 Davidia involucrata HOM05D005835 ORTHO05D007187 4.8e-57 224.9 176 67.6
Atru.chr9.1404 Acer truncatum HOM05D005835 ORTHO05D007187 8.3e-57 224.2 181 66.3
Dinv39089 Davidia involucrata HOM05D005835 ORTHO05D007187 1.1e-56 223.8 182 65.9
ClCG10G003070 Citrullus lanatus HOM05D005835 ORTHO05D007187 9.1e-56 220.7 181 64.6
Duzib205G1381 Durio zibethinus HOM05D005835 ORTHO05D007187 1.2e-55 220.3 181 61.9
Duzib084G0572 Durio zibethinus HOM05D005835 ORTHO05D007187 1.3e-54 216.9 181 70.7
CsaV3_3G003110 Cucumis sativus L. HOM05D005835 ORTHO05D007187 1.7e-54 216.5 181 63.0
Thecc.03G259800 Theobroma cacao HOM05D005835 ORTHO05D007187 2.2e-54 216.1 180 68.3
MELO3C013977.2 Cucumis melo HOM05D005835 ORTHO05D007187 2.9e-54 215.7 181 63.0
RcHm_v2.0_Chr7g0202021 Rosa chinensis HOM05D005835 ORTHO05D007187 5.0e-54 214.9 179 69.3
CANSAT21G1576 Cannabis sativa HOM05D005835 ORTHO05D007187 6.5e-54 214.5 182 70.3
MD04G1080500 Malus domestica HOM05D005835 ORTHO05D007187 6.5e-54 214.5 180 62.8
Nn1g01126 Nelumbo nucifera HOM05D005835 ORTHO05D007187 8.5e-54 214.2 179 64.2
Sabra03G0079300 Salix brachista HOM05D005835 ORTHO05D007187 1.5e-53 213.4 180 60.0
Eucgr.E01477 Eucalyptus grandis HOM05D005835 ORTHO05D007187 1.9e-53 213.0 179 62.0
Potri.001G118700 Populus trichocarpa HOM05D005835 ORTHO05D007187 1.9e-53 213.0 180 60.6
Nn1g01130 Nelumbo nucifera HOM05D005835 ORTHO05D007187 3.2e-53 212.2 179 63.7
TAR374G0447 Trochodendron aralioides HOM05D005835 ORTHO05D007187 1.2e-52 210.3 180 63.9
FAN13G2021 Fragaria x ananassa HOM05D005835 ORTHO05D007187 4.7e-52 208.4 179 59.8
PGR031G1343 Punica granatum HOM05D005835 ORTHO05D007187 1.4e-51 206.8 180 68.3
TAR375G0176 Trochodendron aralioides HOM05D005835 ORTHO05D007187 2.3e-51 206.1 173 65.3
Nitab4.5_0005535g0030 Nicotiana tabacum HOM05D005835 ORTHO05D007187 3.0e-51 205.7 177 62.1
FvH4_5g00490 Fragaria vesca HOM05D005835 ORTHO05D007187 4.0e-51 205.3 179 59.2
FAN08G1980 Fragaria x ananassa HOM05D005835 ORTHO05D007187 4.0e-51 205.3 179 58.7
FAN18G1180 Fragaria x ananassa HOM05D005835 ORTHO05D007187 4.0e-51 205.3 179 59.2
Gohir.D03G159700 Gossypium hirsutum HOM05D005835 ORTHO05D007187 6.8e-51 204.5 179 64.8
Sabra01G0091600 Salix brachista HOM05D005835 ORTHO05D007187 6.8e-51 204.5 180 63.9
TWI81G0081 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 6.8e-51 204.5 180 58.3
Manes.02G034200 Manihot esculenta HOM05D005835 ORTHO05D007187 8.8e-51 204.1 181 58.0
Potri.003G114200 Populus trichocarpa HOM05D005835 ORTHO05D007187 8.8e-51 204.1 180 58.3
Gohir.D12G222800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 2.0e-50 203.0 180 58.9
Gorai.008G238900 Gossypium raimondii HOM05D005835 ORTHO05D007187 2.0e-50 203.0 180 58.9
Rhsim07G0102800 Rhododendron simsii HOM05D005835 ORTHO05D007187 2.6e-50 202.6 171 62.6
COL.COLO4_23892 Corchorus olitorius HOM05D005835 ORTHO05D007187 3.4e-50 202.2 180 65.6
Oeu040228.1 Olea europaea HOM05D005835 ORTHO05D007187 4.4e-50 201.8 181 60.8
Sed0018910 Sechium edule HOM05D005835 ORTHO05D007187 4.4e-50 201.8 181 59.7
MBI04_g35668_MAGBIO Magnolia biondii HOM05D005835 ORTHO05D007187 5.7e-50 201.4 179 62.6
Gohir.A03G013800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 7.5e-50 201.1 179 64.8
FAN04G1493 Fragaria x ananassa HOM05D005835 ORTHO05D007187 9.8e-50 200.7 179 58.7
Gohir.A12G220500 Gossypium hirsutum HOM05D005835 ORTHO05D007187 1.3e-49 200.3 180 59.4
Gorai.003G168000 Gossypium raimondii HOM05D005835 ORTHO05D007187 1.7e-49 199.9 179 64.8
Sc02g0009280 Simmondsia chinensis HOM05D005835 ORTHO05D007187 4.8e-49 198.4 177 55.4
Nitab4.5_0005230g0060 Nicotiana tabacum HOM05D005835 ORTHO05D007187 3.1e-48 195.7 176 58.5
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 1.2e-47 193.7 180 57.8
CAN.G1528.1 Capsicum annuum HOM05D005835 ORTHO05D007187 2.3e-46 189.5 174 56.3
PGSC0003DMG400029987 Solanum tuberosum HOM05D005835 ORTHO05D007187 6.6e-46 188.0 188 54.8
MSTRG.12070 Avicennia marina HOM05D005835 ORTHO05D007187 8.6e-46 187.6 180 57.8
Sopen11g025020 Solanum pennellii HOM05D005835 ORTHO05D007187 9.5e-45 184.1 187 54.5
Peaxi162Scf00004g03718 Petunia axillaris HOM05D005835 ORTHO05D007187 1.2e-44 183.7 173 55.5
CDE02G0720 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 2.8e-44 182.6 182 54.9
Solyc11g065270.2 Solanum lycopersicum HOM05D005835 ORTHO05D007187 3.6e-44 182.2 187 54.0
Aqoxy7G00679 Aquilegia oxysepala HOM05D005835 ORTHO05D007187 4.7e-44 181.8 176 61.4
Migut.A00824 Erythranthe guttata HOM05D005835 ORTHO05D007187 8.0e-44 181.0 184 57.1
CDE04G3390 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 3.0e-43 179.1 180 58.9
Migut.A00868 Erythranthe guttata HOM05D005835 ORTHO05D007187 3.0e-43 179.1 184 56.5
SalBow6G1585 Salvia bowleyana HOM05D005835 ORTHO05D007187 4.0e-43 178.7 178 55.1
ECA233G2089 Erigeron canadensis HOM05D005835 ORTHO05D007187 6.8e-43 177.9 178 58.4
Sc16g0006190 Simmondsia chinensis HOM05D005835 ORTHO05D007187 1.2e-42 177.2 175 51.4
arahy.Tifrunner.gnm1.ann1.7G3HX4 Arachis hypogaea HOM05D005835 ORTHO05D007187 4.4e-42 175.3 172 54.1
Cc08_g13120 Coffea canephora HOM05D005835 ORTHO05D007187 4.4e-42 175.3 178 53.9
Lalb_Chr16g0389651 Lupinus albus HOM05D005835 ORTHO05D007187 9.8e-42 174.1 171 54.4
Aa31LG9G10270 Aethionema arabicum HOM05D005835 ORTHO05D007187 1.3e-41 173.7 183 52.5
HanXRQChr02g0049681 Helianthus annuus HOM05D005835 ORTHO05D007187 3.7e-41 172.2 174 55.7
Lalb_Chr05g0225471 Lupinus albus HOM05D005835 ORTHO05D007187 3.7e-41 172.2 171 53.2
Glyma.05G051800 Glycine max HOM05D005835 ORTHO05D007187 1.1e-40 170.6 171 59.6
Sp6g05250 Schrenkiella parvula HOM05D005835 ORTHO05D007187 2.4e-40 169.5 180 50.0
AL6G47200 Arabidopsis lyrata HOM05D005835 ORTHO05D007187 4.1e-40 168.7 180 50.0
arahy.Tifrunner.gnm1.ann1.4SJ6CH Arachis hypogaea HOM05D005835 ORTHO05D007187 4.1e-40 168.7 167 53.3
SGA_v2.0_scaffold120G32837 Striga asiatica HOM05D005835 ORTHO05D007187 7.0e-40 167.9 181 51.4
THA.LOC104806344 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 9.2e-40 167.5 182 57.7
PSO782G1790 Papaver somniferum HOM05D005835 ORTHO05D007187 1.2e-39 167.2 191 51.8
Psat0s1988g0040 Pisum sativum HOM05D005835 ORTHO05D007187 2.7e-39 166.0 171 52.0
SGA_v2.0_scaffold146G36171 Striga asiatica HOM05D005835 ORTHO05D007187 4.5e-39 165.2 181 50.3
AT4G12340 Arabidopsis thaliana HOM05D005835 ORTHO05D007187 5.9e-39 164.9 180 48.3
HanXRQChr13g0394681 Helianthus annuus HOM05D005835 ORTHO05D007187 7.8e-39 164.5 176 55.7
EL10Ac4g07900 Beta vulgaris HOM05D005835 ORTHO05D007187 1.0e-38 164.1 174 50.6
Ca_12275_v3 Cicer arietinum L. HOM05D005835 ORTHO05D007187 2.9e-38 162.5 171 51.5
PSO478G0096 Papaver somniferum HOM05D005835 ORTHO05D007187 3.9e-38 162.2 192 51.6
AUR62029858 Chenopodium quinoa HOM05D005835 ORTHO05D007187 5.0e-38 161.8 173 50.9
TWI15G0429 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 6.6e-38 161.4 116 67.2
AUR62025857 Chenopodium quinoa HOM05D005835 ORTHO05D007187 8.6e-38 161.0 173 50.3
Phvul.003G214325 Phaseolus vulgaris HOM05D005835 ORTHO05D007187 8.6e-38 161.0 178 48.3
VMungo1215G0693 Vigna mungo HOM05D005835 ORTHO05D007187 2.5e-37 159.5 178 48.9
C02p40850 Brassica napus HOM05D005835 ORTHO05D007187 3.3e-37 159.1 180 47.8
THA.LOC104813805 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 4.3e-37 158.7 180 54.4
TPR.G37587 Trifolium pratense HOM05D005835 ORTHO05D007187 4.3e-37 158.7 177 48.6
HPP92_005292 Vanilla planifolia HOM05D005835 ORTHO05D007187 4.3e-37 158.7 178 51.1
GSVIVG01004287001 Vitis vinifera HOM05D005835 ORTHO05D007187 4.3e-37 158.7 178 53.9
BcaC03g16290 Brassica carinata HOM05D005835 ORTHO05D007187 1.2e-36 157.1 180 47.2
BolC2t10102H Brassica oleracea HOM05D005835 ORTHO05D007187 1.2e-36 157.1 180 47.2
GSVIVG01007420001 Vitis vinifera HOM05D005835 ORTHO05D007187 1.2e-36 157.1 177 53.7
Ah.01g013950 Amaranthus hybridus HOM05D005835 ORTHO05D007187 2.1e-36 156.4 169 49.1
CSS0045584 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 4.7e-36 155.2 115 64.3
Os05g0103500 Oryza sativa ssp. japonica HOM05D005835 ORTHO05D007187 4.7e-36 155.2 180 46.7
Medtr4g102330 Medicago truncatula HOM05D005835 ORTHO05D007187 1.0e-35 154.1 171 49.7
Hund02098 Selenicereus undatus HOM05D005835 ORTHO05D007187 1.0e-35 154.1 172 48.3
BraA02t07561Z Brassica rapa HOM05D005835 ORTHO05D007187 1.4e-35 153.7 180 46.1
A02p25690 Brassica napus HOM05D005835 ORTHO05D007187 3.1e-35 152.5 180 45.6
Carub.0006s3148 Capsella rubella HOM05D005835 ORTHO05D007187 1.2e-34 150.6 180 47.2
CARHR253910 Cardamine hirsuta HOM05D005835 ORTHO05D007187 2.0e-34 149.8 177 46.9
Thhalv10029018m.g Eutrema salsugineum HOM05D005835 ORTHO05D007187 5.8e-34 148.3 178 45.5
BcaB05g23754 Brassica carinata HOM05D005835 ORTHO05D007187 1.3e-33 147.1 180 45.6
C09p34190 Brassica napus HOM05D005835 ORTHO05D007187 1.7e-33 146.7 180 45.6
BolC9t56264H Brassica oleracea HOM05D005835 ORTHO05D007187 1.7e-33 146.7 180 45.6
ATR0115G012 Amborella trichopoda HOM05D005835 ORTHO05D007187 6.4e-33 144.8 181 50.3
BcaB01g01732 Brassica carinata HOM05D005835 ORTHO05D007187 8.3e-33 144.4 179 44.7
A09p26960 Brassica napus HOM05D005835 ORTHO05D007187 4.1e-32 142.1 185 44.9
BraA09t38266Z Brassica rapa HOM05D005835 ORTHO05D007187 4.1e-32 142.1 185 44.9
BcaC04g21221 Brassica carinata HOM05D005835 ORTHO05D007187 5.4e-32 141.7 175 45.1
SHI20590 Sapria himalayana HOM05D005835 ORTHO05D007187 1.6e-31 140.2 180 45.0
CSS0008349 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 1.3e-30 137.1 173 47.4
Zm00001eb356210 Zea mays HOM05D005835 ORTHO05D007187 3.9e-30 135.6 173 50.9
Lsat_1_v5_gn_6_4381 Lactuca sativa HOM05D005835 ORTHO05D007187 6.6e-30 134.8 173 53.2
CARHR253930 Cardamine hirsuta HOM05D005835 ORTHO05D007187 1.2e-28 130.6 111 57.7
Actinidia05173 Actinidia chinensis HOM05D005835 ORTHO05D000538 2.3e-22 109.8 115 56.5
SEGI_03973 Sequoiadendron giganteum HOM05D005835 ORTHO05D007187 1.4e-16 90.5 187 33.7
Mapoly0001s0295 Marchantia polymorpha HOM05D005835 ORTHO05D007187 2.8e-12 76.3 187 29.4
Pp3c15_5650 Physcomitrium patens HOM05D005835 ORTHO05D007187 1.2e-10 70.9 180 31.1
CBR_g50926 Chara braunii HOM05D005835 ORTHO05D007187 1.1e-08 64.3 119 35.3
Pp3c8_11610 Physcomitrium patens HOM05D005835 ORTHO05D007187 5.4e-08 62.0 95 30.5


User provided reference genes

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