Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 5.9e-49 197.2 99 100.0
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 1.4e-45 186.0 99 94.9
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 5.0e-40 167.5 98 87.8
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 3.6e-38 161.4 97 86.6
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 4.7e-38 161.0 97 86.6
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 6.1e-38 160.6 97 84.5
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 6.1e-38 160.6 97 84.5
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 1.0e-37 159.8 97 83.5
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 1.4e-37 159.5 97 81.4
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.4e-37 159.5 97 83.5
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 1.4e-37 159.5 97 83.5
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.3e-37 158.7 97 84.5
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 2.3e-37 158.7 97 81.4
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 4.0e-37 157.9 95 82.1
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 5.2e-37 157.5 91 86.8
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 6.8e-37 157.1 95 84.2
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 6.8e-37 157.1 95 84.2
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 6.8e-37 157.1 97 83.5
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 8.8e-37 156.8 97 80.4
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 8.8e-37 156.8 97 80.4
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 8.8e-37 156.8 95 84.2
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 2.6e-36 155.2 95 83.2
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 3.4e-36 154.8 90 86.7
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 3.4e-36 154.8 95 83.2
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 7.5e-36 153.7 97 80.4
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 1.3e-35 152.9 97 78.4
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 1.7e-35 152.5 97 81.4
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 2.2e-35 152.1 95 77.9
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 2.2e-35 152.1 97 81.4
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 2.2e-35 152.1 97 81.4
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 2.2e-35 152.1 90 84.4
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 3.7e-35 151.4 93 82.8
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 6.3e-35 150.6 90 81.1
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 8.3e-35 150.2 95 81.1
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 8.3e-35 150.2 93 81.7
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 8.3e-35 150.2 90 84.4
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 8.3e-35 150.2 97 78.4
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 1.4e-34 149.4 97 81.4
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 1.4e-34 149.4 90 83.3
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 1.4e-34 149.4 93 81.7
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 1.4e-34 149.4 94 79.8
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 1.8e-34 149.1 95 75.8
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 4.1e-34 147.9 95 75.8
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 4.1e-34 147.9 94 78.7
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 5.4e-34 147.5 97 76.3
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 5.4e-34 147.5 98 79.6
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 7.0e-34 147.1 90 82.2
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 1.6e-33 146.0 90 80.0
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 1.6e-33 146.0 84 86.9
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 1.6e-33 146.0 95 77.9
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 2.7e-33 145.2 97 75.3
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 4.5e-33 144.4 90 80.0
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 7.8e-33 143.7 90 81.1
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 7.8e-33 143.7 90 77.8
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 1.0e-32 143.3 97 75.3
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.7e-32 142.5 90 78.9
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 1.7e-32 142.5 95 75.8
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 2.3e-32 142.1 96 77.1
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 2.9e-32 141.7 88 79.5
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 2.9e-32 141.7 88 79.5
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 5.0e-32 141.0 90 77.8
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 1.1e-31 139.8 99 71.7
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 1.5e-31 139.4 99 71.7
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 3.3e-31 138.3 90 77.8
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 3.3e-31 138.3 90 77.8
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 1.6e-30 136.0 97 73.2
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 6.1e-30 134.0 87 73.6
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 8.0e-30 133.7 97 67.0
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 1.4e-29 132.9 93 71.0
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 1.8e-29 132.5 94 72.3
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 1.8e-29 132.5 84 76.2
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 2.3e-29 132.1 95 67.4
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 6.8e-29 130.6 97 70.1
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 1.2e-28 129.8 98 69.4
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.2e-28 129.8 98 69.4
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.2e-28 129.8 98 69.4
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 2.0e-28 129.0 87 74.7
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 2.6e-28 128.6 87 71.3
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 4.4e-28 127.9 97 68.0
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 5.7e-28 127.5 91 69.2
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 5.7e-28 127.5 88 69.3
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 3.7e-27 124.8 74 81.1
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 4.9e-27 124.4 88 71.6
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 4.9e-27 124.4 91 71.4
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 8.3e-27 123.6 86 69.8
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 2.0e-25 119.0 69 79.7
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.7e-25 118.6 69 87.0
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 3.5e-25 118.2 93 66.7
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 4.6e-25 117.9 93 65.6
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 1.3e-24 116.3 71 85.9
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 1.7e-24 115.9 92 60.9
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 1.7e-24 115.9 92 60.9
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 1.7e-24 115.9 92 60.9
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 1.7e-24 115.9 92 60.9
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.7e-24 115.9 126 54.0
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 5.0e-24 114.4 93 61.3
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 1.1e-23 113.2 93 60.2
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 1.5e-23 112.8 86 67.4
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 7.3e-23 110.5 69 75.4
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 9.5e-23 110.2 82 64.6
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 2.1e-22 109.0 69 78.3
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 1.4e-21 106.3 78 67.9
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 2.0e-20 102.4 82 63.4
SEGI_25349 Sequoiadendron giganteum HOM05D007275 ORTHO05D009279 2.9e-19 98.6 93 53.8
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 8.3e-19 97.1 67 76.1
FAN04G0348 Fragaria x ananassa HOM05D007275 ORTHO05D009279 3.9e-16 88.2 98 53.1
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 2.8e-14 82.0 50 78.0
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 6.2e-14 80.9 67 61.2
Aqoxy2G01184 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 1.6e-06 56.2 102 39.2
ECA236G1637 Erigeron canadensis HOM05D000015 ORTHO05D009146 1.6e-06 56.2 98 38.8
Manes.17G027600 Manihot esculenta HOM05D000015 ORTHO05D009146 2.8e-06 55.5 79 41.8
Aqoxy1G02962 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 3.6e-06 55.1 103 37.9
Mapoly0053s0099 Marchantia polymorpha HOM05D000015 ORTHO05D003525 4.7e-06 54.7 70 42.9
CDE02G0421 Ceratophyllum demersum HOM05D000015 ORTHO05D003525 8.1e-06 53.9 72 38.9
CDE06G1972 Ceratophyllum demersum HOM05D000015 ORTHO05D003525 8.1e-06 53.9 73 38.4


User provided reference genes

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