Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 8.4e-171 603.6 304 100.0
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 1.0e-168 596.7 304 98.0
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 4.0e-157 558.1 304 92.1
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 7.9e-153 543.9 303 89.8
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 3.8e-147 525.0 304 85.5
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 1.6e-145 519.6 304 85.2
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 2.1e-145 519.2 299 86.0
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 4.6e-145 518.1 304 86.5
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 1.0e-144 516.9 304 83.9
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 3.0e-144 515.4 304 84.2
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 3.9e-144 515.0 304 84.2
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 1.1e-143 513.5 304 84.2
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 1.1e-143 513.5 304 84.5
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 1.1e-143 513.5 304 84.9
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 1.5e-143 513.1 301 83.1
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 5.7e-143 511.1 304 83.6
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 2.2e-142 509.2 304 83.9
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 3.7e-142 508.4 299 84.9
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 6.3e-142 507.7 304 82.6
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 6.3e-142 507.7 304 84.5
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 8.2e-142 507.3 304 80.6
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 4.1e-141 505.0 300 84.3
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 5.3e-141 504.6 300 84.7
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 6.9e-141 504.2 304 83.6
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 1.5e-140 503.1 304 81.9
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.0e-140 502.7 304 81.9
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 4.5e-140 501.5 302 82.1
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 4.5e-140 501.5 297 81.8
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.0e-139 500.4 304 79.3
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 2.2e-139 499.2 302 80.8
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 5.0e-139 498.0 304 81.9
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 1.4e-138 496.5 304 81.9
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.4e-138 496.5 304 79.3
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 1.9e-138 496.1 304 81.9
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 3.2e-138 495.4 304 81.9
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 3.2e-138 495.4 304 82.2
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 1.6e-137 493.0 304 80.9
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 1.6e-137 493.0 304 80.9
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 1.6e-137 493.0 304 78.0
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 2.1e-137 492.7 304 79.6
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 2.1e-137 492.7 304 79.6
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 2.7e-137 492.3 304 80.6
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 2.7e-137 492.3 304 78.3
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 3.6e-137 491.9 304 80.6
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 3.6e-137 491.9 304 78.3
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 3.6e-137 491.9 304 78.3
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 4.7e-137 491.5 304 80.9
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 6.1e-137 491.1 304 78.3
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 6.1e-137 491.1 304 80.3
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 7.9e-137 490.7 304 80.3
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 1.0e-136 490.3 304 79.9
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 1.8e-136 489.6 304 79.6
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 1.5e-135 486.5 304 78.6
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 2.0e-135 486.1 304 79.9
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 2.6e-135 485.7 304 78.0
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 4.4e-135 485.0 306 78.8
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 2.8e-134 482.3 304 78.3
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 1.1e-133 480.3 304 79.3
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 2.4e-133 479.2 304 76.6
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 5.3e-133 478.0 306 76.5
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 5.3e-133 478.0 306 76.5
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 5.3e-133 478.0 284 85.9
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 5.3e-133 478.0 304 78.6
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 5.3e-133 478.0 304 78.3
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 1.2e-132 476.9 306 76.1
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 2.6e-132 475.7 306 76.1
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 4.5e-132 474.9 306 75.8
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 5.9e-132 474.6 306 75.5
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 5.0e-131 471.5 303 76.9
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 2.5e-130 469.2 305 77.7
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 3.2e-130 468.8 306 77.1
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 7.2e-130 467.6 304 76.0
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 1.6e-129 466.5 306 75.2
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 3.6e-129 465.3 304 76.3
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 3.6e-129 465.3 300 76.7
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 4.7e-129 464.9 306 76.5
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 8.0e-129 464.2 304 75.0
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 1.1e-127 460.3 304 76.0
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 2.6e-127 459.1 300 76.3
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 4.4e-127 458.4 306 76.1
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 1.7e-126 456.4 306 75.8
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 8.2e-126 454.1 283 80.2
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 2.8e-118 429.1 262 81.7
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 6.3e-118 427.9 301 69.8
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 1.7e-115 419.9 301 70.4
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 1.9e-114 416.4 304 68.1
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 1.9e-114 416.4 301 70.4
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 2.5e-114 416.0 246 84.6
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 7.2e-114 414.5 304 68.8
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 7.2e-114 414.5 294 72.1
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 2.2e-110 402.9 286 69.9
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 2.0e-108 396.4 266 74.4
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 2.8e-97 359.4 242 72.3
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 7.5e-95 351.3 304 58.6
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 3.5e-92 342.4 265 67.2
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 5.0e-91 338.6 295 61.4
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 8.6e-91 337.8 230 73.0
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 1.2e-89 334.0 220 75.5
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 3.6e-89 332.4 256 67.6
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 9.8e-87 324.3 291 57.4
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 8.3e-86 321.2 196 81.1
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 4.1e-85 318.9 301 54.8
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 2.7e-84 316.2 298 55.0
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 7.3e-82 308.1 306 56.9
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 1.2e-73 280.8 196 70.4
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 2.4e-72 276.6 300 50.3
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 4.3e-66 255.8 214 63.1
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 5.8e-63 245.4 314 43.0
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 1.3e-62 244.2 303 50.5
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 8.1e-57 224.9 143 79.0
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.8e-56 223.8 144 79.2
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.4e-55 219.5 144 77.1
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.7e-49 199.5 144 73.6
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 7.6e-47 191.8 317 39.1
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 9.3e-45 184.9 164 54.3
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.1e-42 177.9 115 76.5
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.9e-37 160.6 91 80.2
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 7.9e-36 155.2 265 41.1
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 1.1e-34 151.4 363 30.9
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 1.3e-33 147.9 316 33.2
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 7.9e-28 128.6 80 78.8
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 4.3e-26 122.9 333 30.0
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.1e-13 81.6 43 86.0


User provided reference genes

Program Settings