Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 2.5e-127 458.8 229 100.0
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 1.5e-119 433.0 221 97.3
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 4.6e-105 384.8 232 83.2
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 1.3e-99 366.7 232 81.5
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 1.3e-99 366.7 233 79.4
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 2.9e-99 365.5 235 80.9
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 2.9e-99 365.5 225 82.2
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 5.5e-98 361.3 230 78.7
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 5.5e-98 361.3 232 80.6
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 1.6e-97 359.8 232 79.3
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 1.0e-96 357.1 229 76.4
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 1.3e-96 356.7 230 77.0
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 6.7e-96 354.4 229 77.3
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 8.7e-96 354.0 229 77.7
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 1.5e-95 353.2 224 77.7
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 1.5e-95 353.2 235 77.0
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 7.4e-95 350.9 224 77.7
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 9.7e-95 350.5 229 77.3
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 2.2e-94 349.4 226 74.3
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 4.8e-94 348.2 224 77.7
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 6.3e-94 347.8 229 75.5
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 8.2e-94 347.4 225 76.9
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 8.2e-94 347.4 225 76.9
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 1.4e-93 346.7 227 75.3
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 3.1e-93 345.5 227 75.3
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 4.1e-93 345.1 237 74.7
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 5.3e-93 344.7 228 74.6
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 5.3e-93 344.7 229 75.5
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 5.3e-93 344.7 229 74.7
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 9.0e-93 344.0 225 75.1
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.0e-92 342.8 235 72.8
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 2.0e-92 342.8 226 75.7
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 4.5e-92 341.7 226 74.3
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 4.5e-92 341.7 233 75.1
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 7.7e-92 340.9 226 74.3
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 7.7e-92 340.9 225 74.2
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 7.7e-92 340.9 228 74.6
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 1.0e-91 340.5 222 74.8
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 1.0e-91 340.5 222 74.8
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.0e-91 340.5 227 75.3
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 1.0e-91 340.5 226 75.7
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 1.3e-91 340.1 227 75.3
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 1.3e-91 340.1 233 74.7
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 2.9e-91 339.0 227 74.4
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 2.9e-91 339.0 224 75.0
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 8.5e-91 337.4 227 73.6
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 1.1e-90 337.0 234 71.8
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 1.1e-90 337.0 232 74.1
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 1.4e-90 336.7 233 73.8
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 1.4e-90 336.7 225 76.0
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 2.5e-90 335.9 222 74.3
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 2.5e-90 335.9 240 72.1
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 3.2e-90 335.5 227 74.0
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 4.2e-90 335.1 242 70.7
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 7.2e-90 334.3 231 72.3
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 9.4e-90 334.0 226 71.2
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 1.2e-89 333.6 267 65.2
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 1.6e-89 333.2 225 74.7
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 1.6e-89 333.2 235 72.3
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.1e-89 332.8 225 73.3
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 7.9e-89 330.9 223 72.6
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 7.9e-89 330.9 233 71.2
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 1.4e-88 330.1 229 72.5
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 1.8e-88 329.7 221 71.9
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 3.9e-88 328.6 235 71.9
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 8.8e-88 327.4 235 71.1
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.0e-87 326.2 251 67.7
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 3.3e-87 325.5 227 70.9
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 2.2e-86 322.8 232 70.3
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 2.2e-86 322.8 276 63.4
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 1.1e-85 320.5 232 67.7
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 3.1e-85 318.9 232 66.8
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 4.1e-85 318.5 300 59.0
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 1.2e-84 317.0 221 72.9
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 2.6e-84 315.8 222 72.1
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 7.7e-84 314.3 224 71.9
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 1.0e-83 313.9 218 72.0
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 1.7e-83 313.2 178 82.6
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 1.7e-83 313.2 244 66.4
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 3.8e-83 312.0 231 68.4
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 3.8e-83 312.0 228 70.2
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 3.6e-81 305.4 184 79.3
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 1.1e-79 300.4 289 57.8
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 3.3e-79 298.9 229 66.4
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 1.1e-77 293.9 196 74.5
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 7.7e-76 287.7 208 68.8
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 1.7e-75 286.6 226 66.8
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 2.2e-75 286.2 230 62.2
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 2.2e-75 286.2 233 64.4
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 8.5e-75 284.3 188 79.3
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 2.7e-73 279.3 246 61.4
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 8.8e-72 274.2 226 62.8
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 1.5e-71 273.5 163 81.0
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 4.4e-71 271.9 231 60.6
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 9.1e-69 264.2 182 66.5
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 4.5e-68 261.9 242 57.0
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 3.8e-67 258.8 181 68.0
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.6e-65 253.4 185 69.2
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 2.1e-65 253.1 382 42.7
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 1.8e-61 240.0 233 57.1
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 2.7e-57 226.1 182 58.8
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 4.5e-52 208.8 151 71.5
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 1.9e-50 203.4 181 61.3
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 4.2e-50 202.2 151 70.2
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 5.2e-48 195.3 213 46.5
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 8.0e-41 171.4 133 66.2
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 8.0e-41 171.4 133 66.2
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 1.4e-37 160.6 164 53.0
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 3.5e-36 156.0 218 40.8
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 1.0e-35 154.5 163 47.2
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 1.5e-34 150.6 137 61.3
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 2.9e-30 136.3 149 52.3
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 2.4e-29 133.3 149 51.7
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 9.9e-23 111.3 96 62.5
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 2.9e-22 109.8 139 43.9
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 1.4e-21 107.5 108 60.2
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 5.4e-21 105.5 82 64.6
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 2.1e-20 103.6 54 85.2
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 1.1e-16 91.3 100 53.0
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 6.8e-16 88.6 102 52.9
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 3.5e-12 76.3 88 46.6
Sabra01G0094400 Salix brachista HOM05D006632 ORTHO05D008224 3.0e-11 73.2 48 70.8


User provided reference genes

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