Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012689 Carpinus fangiana HOM05D000497 ORTHO05D002300 3.3e-29 131.0 63 100.0
Cfa018601 Carpinus fangiana HOM05D000497 ORTHO05D002300 1.1e-21 105.9 59 89.8
Haze_17476 Corylus avellana HOM05D000497 ORTHO05D002300 1.2e-18 95.9 59 88.1
QL01p043151 Quercus lobata HOM05D000497 ORTHO05D002300 3.7e-12 74.3 60 68.3
CiPaw.15G084300 Carya illinoinensis HOM05D000497 ORTHO05D002300 4.1e-11 70.9 59 62.7
Manes.06G068900 Manihot esculenta HOM05D000497 ORTHO05D002300 4.1e-11 70.9 59 67.8
Manes.14G101900 Manihot esculenta HOM05D000497 ORTHO05D002300 1.0e-09 66.2 59 61.0
Potri.010G125600 Populus trichocarpa HOM05D000497 ORTHO05D002300 3.8e-09 64.3 59 62.7
CiPaw.16G064700 Carya illinoinensis HOM05D000497 ORTHO05D002300 3.2e-08 61.2 59 57.6
Potri.008G120100 Populus trichocarpa HOM05D000497 ORTHO05D002300 3.2e-08 61.2 59 62.7
Gohir.A12G167300 Gossypium hirsutum HOM05D000497 ORTHO05D002300 4.2e-08 60.8 59 57.6
Gohir.D12G170700 Gossypium hirsutum HOM05D000497 ORTHO05D002300 9.4e-08 59.7 59 55.9
Gorai.008G183300 Gossypium raimondii HOM05D000497 ORTHO05D002300 9.4e-08 59.7 59 55.9
Ciclev10032059m.g Citrus clementina HOM05D000497 ORTHO05D002300 1.2e-07 59.3 61 59.0
COL.COLO4_07919 Corchorus olitorius HOM05D000497 ORTHO05D002300 1.6e-07 58.9 56 58.9
THA.LOC104805253 Tarenaya hassleriana HOM05D000497 ORTHO05D002300 1.6e-07 58.9 61 52.5
Thecc.02G355700 Theobroma cacao HOM05D000497 ORTHO05D002300 3.6e-07 57.8 59 57.6
Duzib248G1049 Durio zibethinus HOM05D000012 ORTHO05D002455 7.9e-07 56.6 59 55.9
Aa31LG2G6460 Aethionema arabicum HOM05D000497 ORTHO05D002300 1.0e-06 56.2 62 53.2
CANSAT01G0626 Cannabis sativa HOM05D000497 ORTHO05D002300 1.0e-06 56.2 59 57.6
AT1G68550 Arabidopsis thaliana HOM05D000497 ORTHO05D002300 1.4e-06 55.8 59 47.5
GSVIVG01011902001 Vitis vinifera HOM05D000497 ORTHO05D002300 1.4e-06 55.8 59 57.6
Duzib251G0520 Durio zibethinus HOM05D000497 ORTHO05D002300 1.8e-06 55.5 60 53.3
Gohir.A13G055300 Gossypium hirsutum HOM05D000497 ORTHO05D002300 1.8e-06 55.5 59 54.2
Gohir.D13G066800 Gossypium hirsutum HOM05D000497 ORTHO05D002300 1.8e-06 55.5 59 54.2
Gorai.013G076100 Gossypium raimondii HOM05D000497 ORTHO05D002300 1.8e-06 55.5 59 54.2
THA.LOC104825701 Tarenaya hassleriana HOM05D000497 ORTHO05D002300 1.8e-06 55.5 61 54.1
Duzib268G0339 Durio zibethinus HOM05D000497 ORTHO05D002300 2.3e-06 55.1 59 55.9
Lj2g0013467 Lotus japonicus HOM05D000497 ORTHO05D002300 2.3e-06 55.1 57 50.9
PGR119G0142 Punica granatum HOM05D000497 ORTHO05D002300 2.3e-06 55.1 59 50.8
TWI31G0025 Tripterygium wilfordii HOM05D000497 ORTHO05D002300 3.0e-06 54.7 46 58.7
Carub.0002s1506 Capsella rubella HOM05D000497 ORTHO05D002300 3.9e-06 54.3 59 47.5
Peaxi162Scf00382g00043 Petunia axillaris HOM05D000497 ORTHO05D002300 3.9e-06 54.3 63 52.4
Sc11g0003320 Simmondsia chinensis HOM05D000497 ORTHO05D002300 6.7e-06 53.5 57 52.6


User provided reference genes

Program Settings