Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012651 Carpinus fangiana HOM05D006313 ORTHO05D007853 7.8e-194 680.2 337 100.0
Cfa014086 Carpinus fangiana HOM05D006313 ORTHO05D007853 7.7e-157 557.4 339 85.3
QL02p014292 Quercus lobata HOM05D006313 ORTHO05D007853 2.6e-136 489.2 340 76.5
Haze_22787 Corylus avellana HOM05D006313 ORTHO05D007853 1.3e-135 486.9 421 65.6
CiPaw.07G138200 Carya illinoinensis HOM05D006313 ORTHO05D007853 7.7e-133 477.6 340 73.2
Prupe.1G353800 Prunus persica HOM05D006313 ORTHO05D007853 1.4e-126 456.8 338 70.7
MD08G1002100 Malus domestica HOM05D006313 ORTHO05D007853 5.5e-123 444.9 340 67.9
RcHm_v2.0_Chr6g0304381 Rosa chinensis HOM05D006313 ORTHO05D007853 6.3e-119 431.4 340 66.2
GSVIVG01013365001 Vitis vinifera HOM05D006313 ORTHO05D007853 6.3e-119 431.4 340 67.6
CANSAT25G3184 Cannabis sativa HOM05D006313 ORTHO05D007853 9.1e-118 427.6 345 65.8
Dinv31948 Davidia involucrata HOM05D006313 ORTHO05D007853 1.0e-116 424.1 340 65.3
TWI12G0830 Tripterygium wilfordii HOM05D006313 ORTHO05D007853 2.9e-116 422.5 340 66.8
FAN15G3120 Fragaria x ananassa HOM05D006313 ORTHO05D007853 1.9e-115 419.9 347 63.7
Rhsim07G0255100 Rhododendron simsii HOM05D006313 ORTHO05D007853 1.9e-115 419.9 340 63.8
Manes.18G004800 Manihot esculenta HOM05D006313 ORTHO05D007853 2.5e-115 419.5 340 64.7
Sabra05G0194600 Salix brachista HOM05D006313 ORTHO05D007853 7.2e-115 417.9 340 65.9
Hma1.2p1_0507F.1_g168570 Hydrangea macrophylla HOM05D006313 ORTHO05D007853 1.6e-114 416.8 340 63.8
Hma1.2p1_0507F.1_g168580 Hydrangea macrophylla HOM05D006313 ORTHO05D007853 1.6e-114 416.8 340 63.8
MELO3C017021.2 Cucumis melo HOM05D006313 ORTHO05D007853 2.8e-114 416.0 349 64.5
Potri.005G251300 Populus trichocarpa HOM05D006313 ORTHO05D007853 2.8e-114 416.0 340 65.9
Nn5g30955 Nelumbo nucifera HOM05D006313 ORTHO05D007853 4.7e-114 415.2 340 63.8
Psat2g064920 Pisum sativum HOM05D006313 ORTHO05D007853 4.7e-114 415.2 342 64.6
TAR381G0755 Trochodendron aralioides HOM05D006313 ORTHO05D007853 1.8e-113 413.3 340 65.3
CsaV3_4G037230 Cucumis sativus L. HOM05D006313 ORTHO05D007853 6.8e-113 411.4 349 63.6
Sed0015221 Sechium edule HOM05D006313 ORTHO05D007853 1.2e-112 410.6 350 64.6
Sabra02G0007500 Salix brachista HOM05D006313 ORTHO05D007853 2.0e-112 409.8 340 65.3
vmacro04407 Vaccinium macrocarpon HOM05D006313 ORTHO05D007853 2.0e-112 409.8 340 62.9
Ca_25243_v3 Cicer arietinum L. HOM05D006313 ORTHO05D007853 1.7e-111 406.8 342 63.5
Medtr5g066730 Medicago truncatula HOM05D006313 ORTHO05D007853 6.4e-111 404.8 349 61.9
Potri.002G010100 Populus trichocarpa HOM05D006313 ORTHO05D007853 8.3e-111 404.4 340 64.1
FAN27G1942 Fragaria x ananassa HOM05D006313 ORTHO05D007853 1.1e-110 404.1 377 58.6
Actinidia37918 Actinidia chinensis HOM05D006313 ORTHO05D007853 1.4e-110 403.7 344 61.3
Glyma.14G223400 Glycine max HOM05D006313 ORTHO05D007853 3.2e-110 402.5 342 63.5
VMungo0647G1480 Vigna mungo HOM05D006313 ORTHO05D007853 1.6e-109 400.2 342 63.2
Gohir.A05G179200 Gossypium hirsutum HOM05D006313 ORTHO05D007853 3.5e-109 399.1 340 63.5
Cc10_g00630 Coffea canephora HOM05D006313 ORTHO05D007853 5.9e-109 398.3 339 59.9
Atru.chr13.141 Acer truncatum HOM05D006313 ORTHO05D007853 7.8e-109 397.9 340 62.9
Lj5g0009044 Lotus japonicus HOM05D006313 ORTHO05D007853 7.8e-109 397.9 342 63.2
FAN20G0447 Fragaria x ananassa HOM05D006313 ORTHO05D007853 1.7e-108 396.7 382 58.1
PGR083G2847 Punica granatum HOM05D006313 ORTHO05D007853 2.3e-108 396.4 346 59.8
Lalb_Chr01g0008341 Lupinus albus HOM05D006313 ORTHO05D007853 2.9e-108 396.0 343 62.4
Phvul.001G001100 Phaseolus vulgaris HOM05D006313 ORTHO05D007853 3.9e-108 395.6 342 62.6
Ciclev10003249m.g Citrus clementina HOM05D006313 ORTHO05D007853 1.5e-107 393.7 352 61.1
Duzib093G1521 Durio zibethinus HOM05D006313 ORTHO05D007853 1.5e-107 393.7 340 62.9
Cpa.g.sc26.189 Carica papaya HOM05D006313 ORTHO05D007853 1.2e-106 390.6 340 61.8
Gorai.009G187700 Gossypium raimondii HOM05D006313 ORTHO05D007853 1.2e-106 390.6 340 62.6
SGA_v2.0_scaffold54G19673 Striga asiatica HOM05D006313 ORTHO05D007853 1.6e-106 390.2 339 58.7
CAN.G311.119 Capsicum annuum HOM05D006313 ORTHO05D007853 2.1e-106 389.8 339 60.8
Eucgr.F01772 Eucalyptus grandis HOM05D006313 ORTHO05D007853 2.1e-106 389.8 346 60.4
MBI08_g24269_MAGBIO Magnolia biondii HOM05D006313 ORTHO05D007853 2.1e-106 389.8 340 59.7
Sopen04g036010 Solanum pennellii HOM05D006313 ORTHO05D007853 2.8e-106 389.4 346 60.4
arahy.Tifrunner.gnm1.ann1.N9IWSS Arachis hypogaea HOM05D006313 ORTHO05D007853 6.2e-106 388.3 343 60.3
arahy.Tifrunner.gnm1.ann1.TM2XQH Arachis hypogaea HOM05D006313 ORTHO05D007853 6.2e-106 388.3 343 60.3
Gohir.D05G182400 Gossypium hirsutum HOM05D006313 ORTHO05D007853 6.2e-106 388.3 340 62.4
Oeu000694.1 Olea europaea HOM05D006313 ORTHO05D007853 6.2e-106 388.3 340 60.3
CSS0043965 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 1.4e-105 387.1 339 60.8
Lsat_1_v5_gn_9_45201 Lactuca sativa HOM05D006313 ORTHO05D007853 3.1e-105 386.0 340 58.5
Migut.N02954 Erythranthe guttata HOM05D006313 ORTHO05D007853 4.0e-105 385.6 339 60.2
Aqoxy5G01036 Aquilegia oxysepala HOM05D006313 ORTHO05D007853 6.8e-105 384.8 340 58.5
HanXRQChr15g0492461 Helianthus annuus HOM05D006313 ORTHO05D007853 2.0e-104 383.3 339 59.3
PGSC0003DMG400009982 Solanum tuberosum HOM05D006313 ORTHO05D007853 2.0e-104 383.3 346 59.8
ECA232G0012 Erigeron canadensis HOM05D006313 ORTHO05D007853 4.4e-104 382.1 339 58.4
Thecc.08G059800 Theobroma cacao HOM05D006313 ORTHO05D007853 9.8e-104 380.9 340 62.1
unitig_22.g5883 Utricularia gibba HOM05D006313 ORTHO05D007853 1.1e-102 377.5 339 57.5
DCAR_013918 Daucus carota HOM05D006313 ORTHO05D007853 3.2e-102 375.9 378 55.6
EL10Ac1g01951 Beta vulgaris HOM05D006313 ORTHO05D007853 5.4e-102 375.2 345 58.0
Nitab4.5_0000588g0050 Nicotiana tabacum HOM05D006313 ORTHO05D007853 1.7e-100 370.2 388 53.6
Hund05111 Selenicereus undatus HOM05D006313 ORTHO05D007853 1.7e-100 370.2 341 57.5
CARHR124070 Cardamine hirsuta HOM05D006313 ORTHO05D007853 3.9e-100 369.0 340 57.6
Peaxi162Scf00711g00530 Petunia axillaris HOM05D006313 ORTHO05D007853 5.0e-100 368.6 340 58.8
Aa31LG5G6170 Aethionema arabicum HOM05D006313 ORTHO05D007853 7.3e-99 364.8 340 58.5
AT2G30600 Arabidopsis thaliana HOM05D006313 ORTHO05D007853 9.5e-99 364.4 340 57.1
THA.LOC104825426 Tarenaya hassleriana HOM05D006313 ORTHO05D007853 1.2e-98 364.0 339 59.3
AL4G25490 Arabidopsis lyrata HOM05D006313 ORTHO05D007853 2.1e-98 363.2 339 58.1
PSO210G6994 Papaver somniferum HOM05D006313 ORTHO05D007853 3.6e-98 362.5 347 55.6
Thhalv10016264m.g Eutrema salsugineum HOM05D006313 ORTHO05D007853 1.4e-97 360.5 339 57.8
PSO170G0983 Papaver somniferum HOM05D006313 ORTHO05D007853 1.4e-97 360.5 347 55.3
Manes.18G005201 Manihot esculenta HOM05D006313 ORTHO05D007853 1.2e-96 357.5 301 64.1
C04p59650 Brassica napus HOM05D006313 ORTHO05D007853 2.0e-96 356.7 340 57.6
A04p23350 Brassica napus HOM05D006313 ORTHO05D007853 1.3e-95 354.0 340 57.4
Carub.0004s1176 Capsella rubella HOM05D006313 ORTHO05D007853 1.9e-94 350.1 340 55.0
SHI07994 Sapria himalayana HOM05D006313 ORTHO05D007853 4.1e-94 349.0 339 57.5
Sp4g13150 Schrenkiella parvula HOM05D006313 ORTHO05D007853 4.1e-94 349.0 340 55.6
Lj4A10G75 Lonicera japonica HOM05D006313 ORTHO05D007853 2.3e-92 343.2 340 57.4
CDE04G1532 Ceratophyllum demersum HOM05D006313 ORTHO05D007853 1.1e-91 340.9 340 52.1
CSS0049724 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 1.9e-91 340.1 312 59.9
HPP92_022696 Vanilla planifolia HOM05D006313 ORTHO05D007853 1.9e-91 340.1 340 51.2
ATR0661G251 Amborella trichopoda HOM05D006313 ORTHO05D007853 6.2e-90 335.1 340 52.6
BraA04t17863Z Brassica rapa HOM05D006313 ORTHO05D007853 2.3e-89 333.2 383 50.9
BolC4t27473H Brassica oleracea HOM05D006313 ORTHO05D007853 3.1e-89 332.8 391 50.1
BcaB06g28382 Brassica carinata HOM05D006313 ORTHO05D007853 5.2e-89 332.0 340 54.4
AUR62036859 Chenopodium quinoa HOM05D006313 ORTHO05D007853 2.6e-88 329.7 339 52.8
Zm00001eb379580 Zea mays HOM05D006313 ORTHO05D007853 1.3e-87 327.4 340 50.3
AUR62040798 Chenopodium quinoa HOM05D006313 ORTHO05D007853 1.6e-85 320.5 339 51.6
SEGI_26691 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 1.2e-82 310.8 356 48.9
CDE02G1829 Ceratophyllum demersum HOM05D006313 ORTHO05D007853 1.6e-77 293.9 308 50.0
FvH4_2g37320 Fragaria vesca HOM05D006313 ORTHO05D007853 2.5e-75 286.6 247 62.8
CSS0044355 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 2.9e-71 273.1 314 51.6
Sabra05G0194400 Salix brachista HOM05D006313 ORTHO05D007853 4.2e-70 269.2 245 60.8
TPR.G38702 Trifolium pratense HOM05D006313 ORTHO05D007853 4.2e-70 269.2 247 61.1
COL.COLO4_05223 Corchorus olitorius HOM05D006313 ORTHO05D007853 2.1e-66 256.9 237 60.3
AagrBONN_evm.TU.Sc2ySwM_228.121 Anthoceros agrestis HOM05D006313 ORTHO05D007853 8.1e-66 255.0 361 40.4
Pp3c3_5520 Physcomitrium patens HOM05D006313 ORTHO05D007853 3.8e-63 246.1 361 42.4
SMO361G0777 Selaginella moellendorffii HOM05D006313 ORTHO05D007853 6.4e-63 245.4 363 41.9
Mapoly0001s0491 Marchantia polymorpha HOM05D006313 ORTHO05D007853 6.0e-61 238.8 355 39.7
Sc02g0009110 Simmondsia chinensis HOM05D006313 ORTHO05D007853 4.3e-59 232.6 222 53.6
TPR.G21513 Trifolium pratense HOM05D006313 ORTHO05D007853 4.1e-33 146.4 95 71.6
Solyc04g082420.3 Solanum lycopersicum HOM05D006313 ORTHO05D007853 6.7e-20 102.4 83 67.5
Sc02g0009120 Simmondsia chinensis HOM05D006313 ORTHO05D007853 2.0e-19 100.9 80 67.5
SEGI_14381 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 1.7e-18 97.8 81 65.4
Cre03.g158850 Chlamydomonas reinhardtii HOM05D006313 ORTHO05D007853 5.0e-15 86.3 81 49.4
Sabra05G0194300 Salix brachista HOM05D006313 ORTHO05D007853 5.0e-15 86.3 48 81.2
ClCG11G018700 Citrullus lanatus HOM05D006313 ORTHO05D007853 2.1e-13 80.9 48 75.0
Os05g0345500 Oryza sativa ssp. japonica HOM05D006313 ORTHO05D007853 1.0e-12 78.6 79 50.6
CBR_g18852 Chara braunii HOM05D006313 ORTHO05D007853 5.9e-08 62.8 77 45.5
CBR_g6381 Chara braunii HOM05D006313 ORTHO05D007853 2.2e-07 60.8 47 57.4
BolC3t20551H Brassica oleracea HOM05D006313 ORTHO05D007853 3.8e-07 60.1 49 57.1


User provided reference genes

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