Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012622 Carpinus fangiana HOM05D000346 ORTHO05D124540 5.4e-43 177.2 84 100.0
Cfa012618 Carpinus fangiana HOM05D000346 ORTHO05D004932 1.9e-40 168.7 84 95.2
Haze_08038 Corylus avellana HOM05D000346 ORTHO05D004932 2.3e-38 161.8 84 89.3
QL12p002936 Quercus lobata HOM05D000346 ORTHO05D004932 3.9e-17 91.3 80 60.0
TAR629G0458 Trochodendron aralioides HOM05D000346 ORTHO05D004932 4.0e-14 81.3 84 50.0
Lalb_Chr05g0215261 Lupinus albus HOM05D000346 ORTHO05D004932 1.2e-13 79.7 79 48.1
arahy.Tifrunner.gnm1.ann1.76WW8S Arachis hypogaea HOM05D000346 ORTHO05D004932 1.5e-13 79.3 77 49.4
arahy.Tifrunner.gnm1.ann1.BK64GE Arachis hypogaea HOM05D000346 ORTHO05D004932 1.5e-13 79.3 77 49.4
Lalb_Chr16g0380511 Lupinus albus HOM05D000346 ORTHO05D004932 3.4e-13 78.2 79 50.6
arahy.Tifrunner.gnm1.ann1.EN6SL9 Arachis hypogaea HOM05D000346 ORTHO05D004932 7.6e-13 77.0 76 50.0
Thecc.03G321600 Theobroma cacao HOM05D000346 ORTHO05D004932 4.9e-12 74.3 84 45.2
arahy.Tifrunner.gnm1.ann1.JWD65V Arachis hypogaea HOM05D000346 ORTHO05D004932 8.4e-12 73.6 76 48.7
Hma1.2p1_0262F.1_g105240 Hydrangea macrophylla HOM05D000346 ORTHO05D004932 1.1e-11 73.2 65 50.8
VMungo1215G0137 Vigna mungo HOM05D000346 ORTHO05D004932 1.4e-11 72.8 79 45.6
Dinv09418 Davidia involucrata HOM05D000346 ORTHO05D004932 2.4e-11 72.0 66 53.0
Hma1.2p1_3942F.1_g338040 Hydrangea macrophylla HOM05D000346 ORTHO05D004932 3.2e-11 71.6 65 50.8
Nn1g09308 Nelumbo nucifera HOM05D000346 ORTHO05D004932 9.2e-11 70.1 74 47.3
Glyma.01G152100 Glycine max HOM05D000346 ORTHO05D004932 1.2e-10 69.7 78 48.7
Nn3g19130 Nelumbo nucifera HOM05D000346 ORTHO05D004932 1.2e-10 69.7 84 45.2
Hma1.2p1_0954F.1_g241190 Hydrangea macrophylla HOM05D000346 ORTHO05D004932 1.6e-10 69.3 77 41.6
Solyc08g075120.3 Solanum lycopersicum HOM05D000346 ORTHO05D004932 2.1e-10 68.9 72 47.2
Cpa.g.sc24.37 Carica papaya HOM05D000346 ORTHO05D004932 3.5e-10 68.2 83 44.6
Manes.17G000600 Manihot esculenta HOM05D000346 ORTHO05D004932 4.6e-10 67.8 86 50.0
Potri.001G127300 Populus trichocarpa HOM05D000346 ORTHO05D004932 4.6e-10 67.8 85 45.9
Glyma.09G217300 Glycine max HOM05D000346 ORTHO05D004932 6.0e-10 67.4 79 44.3
Sopen08g023750 Solanum pennellii HOM05D000346 ORTHO05D004932 6.0e-10 67.4 66 50.0
PGSC0003DMG400020811 Solanum tuberosum HOM05D000346 ORTHO05D004932 6.0e-10 67.4 66 50.0
Sabra01G0098100 Salix brachista HOM05D000346 ORTHO05D004932 7.8e-10 67.0 81 45.7
Nitab4.5_0004072g0010 Nicotiana tabacum HOM05D000346 ORTHO05D004932 1.0e-09 66.6 72 45.8
Duzib205G1034 Durio zibethinus HOM05D000346 ORTHO05D004932 1.3e-09 66.2 78 44.9
PGR042G2778 Punica granatum HOM05D000346 ORTHO05D004932 1.3e-09 66.2 74 47.3
CAN.G22.29 Capsicum annuum HOM05D000346 ORTHO05D004932 3.0e-09 65.1 78 44.9
TPR.G34457 Trifolium pratense HOM05D000346 ORTHO05D004932 3.0e-09 65.1 79 43.0
Psat2g144680 Pisum sativum HOM05D000346 ORTHO05D004932 3.9e-09 64.7 80 46.2
Rhsim11G0040100 Rhododendron simsii HOM05D000346 ORTHO05D004932 5.1e-09 64.3 81 43.2
Oeu047794.1 Olea europaea HOM05D000346 ORTHO05D004932 8.7e-09 63.5 67 52.2
DCAR_000712 Daucus carota HOM05D000346 ORTHO05D004932 1.1e-08 63.2 78 44.9
Medtr5g025960 Medicago truncatula HOM05D000346 ORTHO05D004932 1.1e-08 63.2 80 45.0
CiPaw.12G046800 Carya illinoinensis HOM05D000346 ORTHO05D004932 1.5e-08 62.8 60 65.0
Glyma.16G107900 Glycine max HOM05D000346 ORTHO05D004932 1.5e-08 62.8 67 52.2
RcHm_v2.0_Chr7g0215031 Rosa chinensis HOM05D000346 ORTHO05D004932 1.5e-08 62.8 85 42.4
vmacro00107 Vaccinium macrocarpon HOM05D000346 ORTHO05D004932 1.5e-08 62.8 80 41.2
Peaxi162Scf00014g01819 Petunia axillaris HOM05D000346 ORTHO05D004932 4.3e-08 61.2 65 46.2
Cc00_g06890 Coffea canephora HOM05D000346 ORTHO05D004932 2.1e-07 58.9 84 38.1
Cc00_g09440 Coffea canephora HOM05D000346 ORTHO05D004932 2.1e-07 58.9 84 38.1
Phvul.002G123300 Phaseolus vulgaris HOM05D000346 ORTHO05D004932 4.7e-07 57.8 83 42.2
FAN13G0250 Fragaria x ananassa HOM05D000346 ORTHO05D004932 6.2e-07 57.4 85 43.5
FAN13G0414 Fragaria x ananassa HOM05D000346 ORTHO05D004932 6.2e-07 57.4 85 43.5
FAN18G3968 Fragaria x ananassa HOM05D000346 ORTHO05D004932 6.2e-07 57.4 85 43.5
Phvul.003G277800 Phaseolus vulgaris HOM05D000346 ORTHO05D004932 6.2e-07 57.4 68 41.2
FvH4_5g24650 Fragaria vesca HOM05D000346 ORTHO05D004932 8.1e-07 57.0 85 43.5
Hund11067 Selenicereus undatus HOM05D000346 ORTHO05D004932 8.1e-07 57.0 71 40.8
FAN08G2890 Fragaria x ananassa HOM05D000346 ORTHO05D004932 1.1e-06 56.6 86 41.9
SalBow4G2542 Salvia bowleyana HOM05D000346 ORTHO05D004932 2.4e-06 55.5 66 45.5
Potri.003G106400 Populus trichocarpa HOM05D000346 ORTHO05D004932 3.1e-06 55.1 83 41.0
Atru.chr6.2144 Acer truncatum HOM05D000346 ORTHO05D004932 4.0e-06 54.7 62 46.8
MSTRG.25755 Avicennia marina HOM05D000346 ORTHO05D004932 4.0e-06 54.7 66 47.0
Prupe.5G015000 Prunus persica HOM05D000346 ORTHO05D004932 4.0e-06 54.7 83 45.8
Migut.A00483 Erythranthe guttata HOM05D000346 ORTHO05D004932 5.2e-06 54.3 74 44.6
MSTRG.11850 Avicennia marina HOM05D000346 ORTHO05D004932 6.9e-06 53.9 66 42.4
DCAR_004541 Daucus carota HOM05D000346 ORTHO05D004932 9.0e-06 53.5 85 40.0


User provided reference genes

Program Settings