Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012605 Carpinus fangiana HOM05D000040 ORTHO05D002507 8.9e-139 496.9 244 100.0
Haze_08046 Corylus avellana HOM05D000040 ORTHO05D002507 1.4e-78 297.0 466 43.3
Haze_08056 Corylus avellana HOM05D000040 ORTHO05D002507 7.9e-71 271.2 443 41.5
Haze_04830 Corylus avellana HOM05D000040 ORTHO05D002507 7.4e-61 238.0 476 37.8
Haze_04829 Corylus avellana HOM05D000040 ORTHO05D002507 2.5e-56 223.0 465 36.8
Cfa006019 Carpinus fangiana HOM05D000040 ORTHO05D002507 2.4e-51 206.5 369 41.2
Cfa006021 Carpinus fangiana HOM05D000040 ORTHO05D002507 7.3e-24 115.2 259 34.4
TAR369G0140 Trochodendron aralioides HOM05D000040 ORTHO05D002507 1.7e-20 104.0 412 26.7
Migut.D00175 Erythranthe guttata HOM05D000040 ORTHO05D002507 4.0e-14 82.8 84 48.8
Potri.001G020400 Populus trichocarpa HOM05D000040 ORTHO05D002507 2.6e-13 80.1 81 46.9
MD11G1299500 Malus domestica HOM05D000040 ORTHO05D002507 2.2e-12 77.0 85 48.2
Prupe.3G234600 Prunus persica HOM05D000040 ORTHO05D002507 2.9e-12 76.6 74 48.6
Migut.B00541 Erythranthe guttata HOM05D000040 ORTHO05D002507 6.4e-12 75.5 85 47.1
Sabra01G0015100 Salix brachista HOM05D000040 ORTHO05D002507 8.3e-12 75.1 81 45.7
Nn1g07070 Nelumbo nucifera HOM05D000040 ORTHO05D002507 1.9e-11 73.9 88 44.3
Nn1g07071 Nelumbo nucifera HOM05D000040 ORTHO05D002507 2.4e-11 73.6 90 41.1
SGA_v2.0_scaffold1G00419 Striga asiatica HOM05D000040 ORTHO05D002507 2.4e-11 73.6 89 42.7
Migut.M00592 Erythranthe guttata HOM05D000040 ORTHO05D002507 4.1e-11 72.8 85 43.5
Prupe.8G253800 Prunus persica HOM05D000040 ORTHO05D002507 4.1e-11 72.8 78 44.9
SGA_v2.0_scaffold11G05753 Striga asiatica HOM05D000040 ORTHO05D002507 5.4e-11 72.4 77 40.3
SGA_v2.0_scaffold181G39797 Striga asiatica HOM05D000040 ORTHO05D002507 5.4e-11 72.4 80 45.0
TAR629G1925 Trochodendron aralioides HOM05D000040 ORTHO05D002507 9.2e-11 71.6 89 42.7
Atru.chr2.2706 Acer truncatum HOM05D000040 ORTHO05D002507 2.1e-10 70.5 83 42.2
Prupe.8G253700 Prunus persica HOM05D000040 ORTHO05D002507 6.0e-10 68.9 78 44.9
Migut.D00158 Erythranthe guttata HOM05D000040 ORTHO05D002507 7.8e-10 68.6 85 40.0
Prupe.8G253600 Prunus persica HOM05D000040 ORTHO05D002507 7.8e-10 68.6 78 43.6
SalBow8G0827 Salvia bowleyana HOM05D000040 ORTHO05D002507 1.7e-09 67.4 85 40.0
Migut.M00591 Erythranthe guttata HOM05D000040 ORTHO05D002507 3.0e-09 66.6 85 42.4
TAR369G1147 Trochodendron aralioides HOM05D000040 ORTHO05D002507 3.9e-09 66.2 121 40.5
Migut.D00174 Erythranthe guttata HOM05D000040 ORTHO05D002507 6.6e-09 65.5 84 36.9
arahy.Tifrunner.gnm1.ann1.K5I42B Arachis hypogaea HOM05D000040 ORTHO05D002507 8.6e-09 65.1 83 43.4
Lalb_Chr06g0172061 Lupinus albus HOM05D000040 ORTHO05D002507 8.6e-09 65.1 94 35.1
Atru.chr2.3252 Acer truncatum HOM05D000040 ORTHO05D002507 1.5e-08 64.3 264 28.4
Aqoxy2G03085 Aquilegia oxysepala HOM05D000040 ORTHO05D002507 1.5e-08 64.3 83 36.1
Migut.M00590 Erythranthe guttata HOM05D000040 ORTHO05D002507 1.5e-08 64.3 79 41.8
PSO170G1423 Papaver somniferum HOM05D000040 ORTHO05D002507 1.5e-08 64.3 364 24.5
PSO675G6800 Papaver somniferum HOM05D000040 ORTHO05D002507 1.5e-08 64.3 88 34.1
PSO832G1983 Papaver somniferum HOM05D000040 ORTHO05D002507 1.9e-08 63.9 141 35.5
MD11G1298600 Malus domestica HOM05D000040 ORTHO05D002507 4.3e-08 62.8 74 40.5
Aqoxy2G02605 Aquilegia oxysepala HOM05D000040 ORTHO05D002507 5.6e-08 62.4 120 33.3
Haze_09638 Corylus avellana HOM05D000040 ORTHO05D002507 5.6e-08 62.4 85 38.8
Lalb_Chr15g0081391 Lupinus albus HOM05D000040 ORTHO05D002507 9.5e-08 61.6 82 40.2
Gohir.D13G144900 Gossypium hirsutum HOM05D000040 ORTHO05D002507 1.6e-07 60.8 93 37.6
MD03G1277200 Malus domestica HOM05D000040 ORTHO05D002507 2.1e-07 60.5 81 37.0
MD05G1305400 Malus domestica HOM05D000040 ORTHO05D002507 2.1e-07 60.5 82 40.2
Migut.D00715 Erythranthe guttata HOM05D000040 ORTHO05D002507 2.8e-07 60.1 88 35.2
Migut.M00596 Erythranthe guttata HOM05D000040 ORTHO05D002507 4.7e-07 59.3 91 34.1
Gorai.013G162100 Gossypium raimondii HOM05D000040 ORTHO05D002507 6.2e-07 58.9 117 28.2
Prupe.4G056900 Prunus persica HOM05D000040 ORTHO05D002507 8.1e-07 58.5 86 38.4
Ciclev10008293m.g Citrus clementina HOM05D000040 ORTHO05D002507 1.1e-06 58.2 94 34.0
PSO063G0824 Papaver somniferum HOM05D000040 ORTHO05D002507 1.1e-06 58.2 97 34.0
Atru.chr2.2707 Acer truncatum HOM05D000040 ORTHO05D002507 1.8e-06 57.4 84 34.5
Migut.D00156 Erythranthe guttata HOM05D000040 ORTHO05D002507 1.8e-06 57.4 85 32.9
Ciclev10010685m.g Citrus clementina HOM05D000040 ORTHO05D002507 2.4e-06 57.0 78 35.9
PSO421G0744 Papaver somniferum HOM05D000040 ORTHO05D002507 2.4e-06 57.0 93 33.3
Migut.M00594 Erythranthe guttata HOM05D000040 ORTHO05D002507 3.1e-06 56.6 90 31.1
Gohir.D13G144700 Gossypium hirsutum HOM05D000040 ORTHO05D002507 3.1e-06 56.6 81 35.8
Gohir.A13G123200 Gossypium hirsutum HOM05D000040 ORTHO05D000267 4.0e-06 56.2 110 33.6
SGA_v2.0_scaffold11G05756 Striga asiatica HOM05D006618 ORTHO05D008291 4.0e-06 56.2 76 38.2
Migut.M00595 Erythranthe guttata HOM05D000040 ORTHO05D002507 5.2e-06 55.8 79 32.9
Atru.chr2.2709 Acer truncatum HOM05D000040 ORTHO05D002507 6.8e-06 55.5 79 39.2
Migut.M00588 Erythranthe guttata HOM05D000040 ORTHO05D002507 6.8e-06 55.5 90 31.1
Lalb_Chr06g0172101 Lupinus albus HOM05D000040 ORTHO05D002507 6.8e-06 55.5 67 43.3
PSO017G3280 Papaver somniferum HOM05D000040 ORTHO05D002507 6.8e-06 55.5 96 37.5
PSO170G3197 Papaver somniferum HOM05D000040 ORTHO05D002507 6.8e-06 55.5 98 31.6
Atru.chr2.2710 Acer truncatum HOM05D000040 ORTHO05D002507 8.9e-06 55.1 77 37.7
Ah.01g010540 Amaranthus hybridus HOM05D000040 ORTHO05D002507 8.9e-06 55.1 84 38.1
Cpa.g.sc80.48 Carica papaya HOM05D000040 ORTHO05D002507 8.9e-06 55.1 75 38.7
Gorai.002G086300 Gossypium raimondii HOM05D000040 ORTHO05D002507 8.9e-06 55.1 78 34.6


User provided reference genes

Program Settings