Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 2.3e-89 332.8 257 100.0
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 2.8e-82 309.3 277 90.3
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 4.7e-82 308.5 269 91.8
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 2.6e-56 223.0 250 83.6
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 5.8e-48 195.3 256 76.6
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 4.9e-47 192.2 239 79.5
Prupe.5G019900 Prunus persica HOM05D006475 ORTHO05D007969 1.0e-44 184.5 248 75.4
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 3.0e-44 183.0 255 73.7
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 1.3e-42 177.6 239 76.2
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 4.8e-42 175.6 255 71.8
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 6.2e-42 175.3 239 74.9
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 2.4e-41 173.3 251 72.5
Glyma.01G149900 Glycine max HOM05D006475 ORTHO05D007969 1.2e-40 171.0 255 71.0
Lalb_Chr05g0215421 Lupinus albus HOM05D006475 ORTHO05D007969 2.6e-40 169.9 261 68.6
PGR031G1524 Punica granatum HOM05D006475 ORTHO05D007969 4.5e-40 169.1 242 73.6
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 2.2e-39 166.8 249 70.7
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 2.9e-39 166.4 236 74.6
Ca_25099_v3 Cicer arietinum L. HOM05D006475 ORTHO05D007969 6.5e-39 165.2 256 70.3
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 3.2e-38 162.9 252 71.8
Phvul.002G128300 Phaseolus vulgaris HOM05D006475 ORTHO05D007969 3.2e-38 162.9 255 69.8
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 1.6e-37 160.6 240 70.4
VMungo1215G2540 Vigna mungo HOM05D006475 ORTHO05D007969 1.6e-37 160.6 253 69.6
Glyma.09G214000 Glycine max HOM05D006475 ORTHO05D007969 4.6e-37 159.1 251 71.3
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 2.3e-36 156.8 255 67.8
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 3.0e-36 156.4 247 70.0
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 3.9e-36 156.0 236 72.9
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 3.9e-36 156.0 251 68.5
Cpa.g.sc137.18 Carica papaya HOM05D006475 ORTHO05D007969 5.1e-36 155.6 244 70.1
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 6.7e-36 155.2 251 68.9
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 8.7e-36 154.8 247 68.0
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.1e-35 154.5 236 72.5
FAN13G3229 Fragaria x ananassa HOM05D006475 ORTHO05D007969 3.3e-35 152.9 236 72.5
Gohir.A05G381700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 4.3e-35 152.5 240 71.7
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 7.4e-35 151.8 252 68.3
Gorai.012G037900 Gossypium raimondii HOM05D006475 ORTHO05D007969 2.1e-34 150.2 240 71.2
Ciclev10005760m.g Citrus clementina HOM05D006475 ORTHO05D007969 2.8e-34 149.8 248 71.4
Eucgr.D02591 Eucalyptus grandis HOM05D006475 ORTHO05D007969 2.8e-34 149.8 251 69.3
Medtr5g026800 Medicago truncatula HOM05D006475 ORTHO05D007969 2.8e-34 149.8 268 66.0
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 2.8e-34 149.8 254 66.1
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 3.7e-34 149.4 255 67.1
QL08p050707 Quercus lobata HOM05D006475 ORTHO05D007969 6.3e-34 148.7 201 82.6
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 8.2e-34 148.3 262 54.6
Gohir.D04G033600 Gossypium hirsutum HOM05D006475 ORTHO05D007969 8.2e-34 148.3 240 70.8
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 8.2e-34 148.3 252 67.9
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 8.2e-34 148.3 249 67.5
Hund11101 Selenicereus undatus HOM05D006475 ORTHO05D007969 1.1e-33 147.9 255 66.7
FAN04G1597 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.4e-33 147.5 236 72.0
FAN08G1612 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.4e-33 147.5 236 71.2
arahy.Tifrunner.gnm1.ann1.0NMX6V Arachis hypogaea HOM05D006475 ORTHO05D007969 1.2e-32 144.4 260 63.8
arahy.Tifrunner.gnm1.ann1.CC5QNU Arachis hypogaea HOM05D006475 ORTHO05D007969 1.2e-32 144.4 260 63.8
CAN.G320.16 Capsicum annuum HOM05D006475 ORTHO05D007969 1.2e-32 144.4 250 66.0
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 4.5e-32 142.5 255 67.5
Ah.12g056010 Amaranthus hybridus HOM05D006475 ORTHO05D007969 1.3e-31 141.0 240 65.8
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 2.2e-31 140.2 251 67.7
arahy.Tifrunner.gnm1.ann1.17PB5S Arachis hypogaea HOM05D006475 ORTHO05D007969 8.5e-31 138.3 211 71.1
PSO717G0136 Papaver somniferum HOM05D006475 ORTHO05D007969 8.5e-31 138.3 265 65.3
Aqoxy7G00886 Aquilegia oxysepala HOM05D006475 ORTHO05D007969 1.1e-30 137.9 269 64.7
arahy.Tifrunner.gnm1.ann1.SLXS5Y Arachis hypogaea HOM05D006475 ORTHO05D007969 3.2e-30 136.3 184 80.4
CANSAT21G0913 Cannabis sativa HOM05D006475 ORTHO05D007969 4.2e-30 136.0 238 67.2
AUR62027319 Chenopodium quinoa HOM05D006475 ORTHO05D007969 4.2e-30 136.0 254 61.8
BcaC09g51436 Brassica carinata HOM05D006475 ORTHO05D007969 9.3e-30 134.8 247 64.8
BolC1t01287H Brassica oleracea HOM05D006475 ORTHO05D007969 9.3e-30 134.8 247 64.8
AUR62007413 Chenopodium quinoa HOM05D006475 ORTHO05D007969 9.3e-30 134.8 251 61.8
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 3.6e-29 132.9 201 58.7
A01p11110 Brassica napus HOM05D006475 ORTHO05D007969 3.6e-29 132.9 244 66.0
BraA01t01057Z Brassica rapa HOM05D006475 ORTHO05D007969 3.6e-29 132.9 244 66.0
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 3.6e-29 132.9 244 67.6
AL7G34940 Arabidopsis lyrata HOM05D006475 ORTHO05D007969 6.1e-29 132.1 250 65.2
Carub.0007s2200 Capsella rubella HOM05D006475 ORTHO05D007969 6.1e-29 132.1 243 65.8
Psat2g142320 Pisum sativum HOM05D006475 ORTHO05D007969 7.9e-29 131.7 291 59.1
CARHR226020 Cardamine hirsuta HOM05D006475 ORTHO05D007969 1.0e-28 131.3 244 66.4
PSO675G8107 Papaver somniferum HOM05D006475 ORTHO05D007969 2.3e-28 130.2 293 60.8
vmacro17427 Vaccinium macrocarpon HOM05D006475 ORTHO05D007969 3.9e-28 129.4 306 56.5
CDE11G0189 Ceratophyllum demersum HOM05D006475 ORTHO05D007969 1.9e-27 127.1 253 62.8
HanXRQChr08g0226771 Helianthus annuus HOM05D006475 ORTHO05D007969 2.5e-27 126.7 257 64.2
C01p13140 Brassica napus HOM05D006475 ORTHO05D007969 3.3e-27 126.3 74 82.4
Aa31LG6G1840 Aethionema arabicum HOM05D006475 ORTHO05D007969 1.3e-26 124.4 241 65.6
AT4G19150 Arabidopsis thaliana HOM05D006475 ORTHO05D007969 1.3e-26 124.4 71 85.9
unitig_0.g2207 Utricularia gibba HOM05D006475 ORTHO05D007969 1.3e-26 124.4 85 72.9
Sp7g17850 Schrenkiella parvula HOM05D006475 ORTHO05D007969 1.6e-26 124.0 241 65.1
Lsat_1_v5_gn_6_15221 Lactuca sativa HOM05D006475 ORTHO05D007969 2.2e-26 123.6 241 64.7
THA.LOC104812889 Tarenaya hassleriana HOM05D006475 ORTHO05D007969 2.8e-26 123.2 247 62.8
TPR.G17268 Trifolium pratense HOM05D006475 ORTHO05D007969 4.8e-26 122.5 256 62.9
Lj2g0004034 Lotus japonicus HOM05D006475 ORTHO05D007969 6.3e-26 122.1 272 61.0
SGA_v2.0_scaffold144G35881 Striga asiatica HOM05D006475 ORTHO05D007969 1.4e-25 120.9 247 65.2
BcaNung04008 Brassica carinata HOM05D006475 ORTHO05D007969 6.9e-25 118.6 183 77.0
Thhalv10026017m.g Eutrema salsugineum HOM05D006475 ORTHO05D007969 9.1e-25 118.2 236 65.3
GSVIVG01022797001 Vitis vinifera HOM05D006475 ORTHO05D007969 1.2e-24 117.9 75 76.0
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 3.4e-24 116.3 71 78.9
HPP92_021118 Vanilla planifolia HOM05D006475 ORTHO05D007969 3.4e-24 116.3 251 63.3
Dinv28010 Davidia involucrata HOM05D006475 ORTHO05D007969 7.7e-24 115.2 71 80.3
TAR375G0514 Trochodendron aralioides HOM05D006475 ORTHO05D007969 1.3e-23 114.4 203 73.9
Migut.E01351 Erythranthe guttata HOM05D006475 ORTHO05D007969 1.7e-23 114.0 255 63.5
ECA233G2922 Erigeron canadensis HOM05D006475 ORTHO05D007969 4.2e-22 109.4 253 50.2
EL10Ac5g11923 Beta vulgaris HOM05D006475 ORTHO05D007969 7.2e-22 108.6 240 60.4
FAN18G4370 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.0e-20 104.8 202 72.8
Zm00001eb025510 Zea mays HOM05D006475 ORTHO05D007969 1.8e-20 104.0 237 62.0
Os10g0580700 Oryza sativa ssp. japonica HOM05D006475 ORTHO05D007969 6.7e-20 102.1 235 62.1
Oeu042209.2 Olea europaea HOM05D006475 ORTHO05D007969 1.1e-19 101.3 385 45.5
AagrBONN_evm.TU.Sc2ySwM_228.4166 Anthoceros agrestis HOM05D006475 ORTHO05D007969 3.3e-19 99.8 79 58.2
arahy.Tifrunner.gnm1.ann1.X7UPX8 Arachis hypogaea HOM05D006475 ORTHO05D007969 1.3e-18 97.8 233 60.9
C03p81780 Brassica napus HOM05D006475 ORTHO05D007969 1.8e-17 94.0 84 58.3
CsaV3_3G040920 Cucumis sativus L. HOM05D006475 ORTHO05D007969 6.9e-17 92.0 266 56.8
BolC3t20450H Brassica oleracea HOM05D006475 ORTHO05D007969 1.2e-16 91.3 68 69.1
arahy.Tifrunner.gnm1.ann1.79230D Arachis hypogaea HOM05D006475 ORTHO05D007969 2.0e-16 90.5 203 47.3
Mapoly0051s0035 Marchantia polymorpha HOM05D006475 ORTHO05D007969 2.0e-16 90.5 67 62.7
Nitab4.5_0001175g0110 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.9e-14 84.0 203 34.0
ClCG10G015530 Citrullus lanatus HOM05D000058 ORTHO05D000077 3.2e-14 83.2 63 69.8
Dinv28011 Davidia involucrata HOM05D006475 ORTHO05D007969 1.0e-12 78.2 105 51.4
SEGI_07236 Sequoiadendron giganteum HOM05D006475 ORTHO05D007969 3.9e-12 76.3 265 50.9
Nitab4.5_0001175g0040 Nicotiana tabacum HOM05D006475 ORTHO05D007969 9.7e-11 71.6 195 49.7
Sed0010053 Sechium edule HOM05D006475 ORTHO05D007969 4.8e-10 69.3 265 55.1
Pp3c7_14210 Physcomitrium patens HOM05D006475 ORTHO05D007969 1.1e-09 68.2 58 53.4
Nitab4.5_0000532g0060 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.8e-09 67.4 33 87.9
COL.COLO4_12070 Corchorus olitorius HOM05D006475 ORTHO05D007969 2.4e-09 67.0 102 50.0
Sc07g0008230 Simmondsia chinensis HOM05D006475 ORTHO05D007969 4.5e-08 62.8 197 59.4
CBR_g41202 Chara braunii HOM05D006475 ORTHO05D007969 1.3e-07 61.2 44 61.4
Gohir.D08G138080 Gossypium hirsutum HOM05D006475 ORTHO05D007969 1.1e-06 58.2 35 77.1
Gorai.004G141500 Gossypium raimondii HOM05D006475 ORTHO05D007969 1.9e-06 57.4 35 77.1


User provided reference genes

Program Settings